RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 ZNF507Q8TCN5 953 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 GOLGA1Q92805 767 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 PKNOX2Q96KN3 472 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 AK8Q96MA6 479 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 CHP1Q99653 195 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 UBA5Q9GZZ9 404 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 THAP9Q9H5L6 903 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 ZSWIM4Q9H7M6 989 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 C6orf50Q9HD87 102 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 PSMA7O14818 248 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 PLCG2P16885 1265 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 EEF1GP26641 437 aaKnown RBP11.07□□□□□ -0.64
CLIP1-204ENST00000501271 GNA11P29992 359 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 NOVP48745 357 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 STIM1Q13586 685 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 TBC1D16Q8TBP0 767 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 TBCKQ8TEA7 893 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 RABGGTAQ92696 567 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 EEF2KMTQ96G04 330 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 DUSP9Q99956 384 aaKnown RBP11.07□□□□□ -0.64
CLIP1-204ENST00000501271 SLF1Q9BQI6 1058 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 TRIM9Q9C026 710 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 CUEDC2Q9H467 287 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 TMEM260Q9NX78 707 aa11.07□□□□□ -0.64
CLIP1-204ENST00000501271 SEC63Q9UGP8 760 aaKnown RBP11.07□□□□□ -0.64
CLIP1-204ENST00000501271 FRMPD2Q68DX3 1309 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-204ENST00000501271 TFRCP02786 760 aaKnown RBP11.06□□□□□ -0.64
CLIP1-204ENST00000501271 SERPINB2P05120 415 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 TECP42680 631 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 ST5P78524 1137 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 TERF2Q15554 542 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 JAKMIP3Q5VZ66 844 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 CC2D1AQ6P1N0 951 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-204ENST00000501271 FAM163AQ96GL9 167 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-204ENST00000501271 MMTAG2Q9BU76 263 aaKnown RBP11.06□□□□□ -0.64
CLIP1-204ENST00000501271 PARD6BQ9BYG5 372 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 MAGEF1Q9HAY2 307 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 BIN2Q9UBW5 565 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-204ENST00000501271 REXO2Q9Y3B8 237 aaKnown RBP11.06□□□□□ -0.64
CLIP1-204ENST00000501271 ADAMTSL1Q8N6G6 1762 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 B4DLN1 442 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 PES1O00541 588 aaKnown RBP11.06□□□□□ -0.64
CLIP1-204ENST00000501271 SASH3O75995 380 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 PDHBP11177 359 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 CHMP4BP1P59074 171 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 STK4Q13043 487 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 SOGA3Q5TF21 947 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 SRGAP1Q7Z6B7 1085 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 REXO1Q8N1G1 1221 aaKnown RBP11.06□□□□□ -0.64
CLIP1-204ENST00000501271 RBM17Q96I25 401 aaKnown RBP11.06□□□□□ -0.64
CLIP1-204ENST00000501271 PUF60Q9UHX1 559 aaKnown RBP11.06□□□□□ -0.64
CLIP1-204ENST00000501271 CDC23Q9UJX2 597 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 DAGLAQ9Y4D2 1042 aa11.06□□□□□ -0.64
CLIP1-204ENST00000501271 PLIN4Q96Q06 1357 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 A0A1W2PQC6 194 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 CTAGE9A4FU28 777 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 TBC1D8O95759 1140 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 FCER1AP12319 257 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 SMARCA1P28370 1054 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 ASIC1P78348 528 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 PDE4DQ08499 809 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 KIF4BQ2VIQ3 1234 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 CLEC10AQ8IUN9 316 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 CSGALNACT2Q8N6G5 542 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 DHTKD1Q96HY7 919 aaPredicted RBP11.05□□□□□ -0.64
CLIP1-204ENST00000501271 DNAJC7Q99615 494 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 C7orf25Q9BPX7 421 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 RIOX1Q9H6W3 641 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 EXOC1Q9NV70 894 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 PODXL2Q9NZ53 605 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 ESYT2A0FGR8 921 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 NDUFA10O95299 355 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 SEMA3FQ13275 785 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 PICALMQ13492 652 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 ANKRD40Q6AI12 368 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 WDR59Q6PJI9 974 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 LRRC47Q8N1G4 583 aaKnown RBP11.05□□□□□ -0.64
CLIP1-204ENST00000501271 P2RX5Q93086 422 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 HPS3Q969F9 1004 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 TUBGCP2Q9BSJ2 902 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 MAGEC2Q9UBF1 373 aaPredicted RBP11.05□□□□□ -0.64
CLIP1-204ENST00000501271 TRIM10Q9UDY6 481 aa11.05□□□□□ -0.64
CLIP1-204ENST00000501271 QSER1Q2KHR3 1735 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 MYH4Q9Y623 1939 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 UBAP1LF5GYI3 381 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 C6orf229H3BNL8 230 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 NKRFO15226 690 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLIP1-204ENST00000501271 EDIL3O43854 480 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 SRGNP10124 158 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 CCNE1P24864 410 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 KLK7P49862 253 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 EIF6P56537 245 aaKnown RBP11.04□□□□□ -0.64
CLIP1-204ENST00000501271 DDR1Q08345 913 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 ZNF771Q7L3S4 317 aaPredicted RBP11.04□□□□□ -0.64
CLIP1-204ENST00000501271 SLF2Q8IX21 1173 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 KIAA0895Q8NCT3 520 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 OR8K1Q8NGG5 319 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 TBC1D22AQ8WUA7 517 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 COA7Q96BR5 231 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 NAPGQ99747 312 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms