RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 ADGRF4Q8IZF3 695 aa18.73■□□□□ 0.59
LMNA-217ENST00000498722 CTCFLQ8NI51 663 aaPredicted RBP18.73■□□□□ 0.59
LMNA-217ENST00000498722 NPLOC4Q8TAT6 608 aa18.73■□□□□ 0.59
LMNA-217ENST00000498722 RNF208Q9H0X6 261 aa18.73■□□□□ 0.59
LMNA-217ENST00000498722 MAD2L2Q9UI95 211 aa18.73■□□□□ 0.59
LMNA-217ENST00000498722 SLC12A7Q9Y666 1083 aa18.73■□□□□ 0.59
LMNA-217ENST00000498722 FRMPD3Q5JV73 1810 aa18.72■□□□□ 0.59
LMNA-217ENST00000498722 LCTP09848 1927 aa18.72■□□□□ 0.59
LMNA-217ENST00000498722 COBLO75128 1261 aa18.72■□□□□ 0.59
LMNA-217ENST00000498722 DDAH1O94760 285 aa18.72■□□□□ 0.59
LMNA-217ENST00000498722 CCL5P13501 91 aa18.72■□□□□ 0.59
LMNA-217ENST00000498722 LIFRP42702 1097 aa18.72■□□□□ 0.59
LMNA-217ENST00000498722 TRIM32Q13049 653 aa18.72■□□□□ 0.59
LMNA-217ENST00000498722 CDC37Q16543 378 aaPredicted RBP18.72■□□□□ 0.59
LMNA-217ENST00000498722 TKFCQ3LXA3 575 aa18.72■□□□□ 0.59
LMNA-217ENST00000498722 USH1GQ495M9 461 aa18.72■□□□□ 0.59
LMNA-217ENST00000498722 SYNE3Q6ZMZ3 975 aa18.72■□□□□ 0.59
LMNA-217ENST00000498722 RAB11FIP4Q86YS3 637 aa18.72■□□□□ 0.59
LMNA-217ENST00000498722 NAP1L2Q9ULW6 460 aaPredicted RBP18.72■□□□□ 0.59
LMNA-217ENST00000498722 WDR19Q8NEZ3 1342 aa18.71■□□□□ 0.59
LMNA-217ENST00000498722 PRKAR2AP13861 404 aaKnown RBP18.71■□□□□ 0.59
LMNA-217ENST00000498722 RXRAP19793 462 aa18.71■□□□□ 0.59
LMNA-217ENST00000498722 KIF5BP33176 963 aa18.71■□□□□ 0.59
LMNA-217ENST00000498722 EXOSC10Q01780 885 aaKnown RBP18.71■□□□□ 0.59
LMNA-217ENST00000498722 TROAPQ12815 778 aa18.71■□□□□ 0.59
LMNA-217ENST00000498722 TOB2Q14106 344 aaPredicted RBP18.71■□□□□ 0.59
LMNA-217ENST00000498722 NFKBIBQ15653 356 aa18.71■□□□□ 0.59
LMNA-217ENST00000498722 MFSD14CQ5VZR4 134 aa18.71■□□□□ 0.59
LMNA-217ENST00000498722 Q6ZUG5 572 aa18.71■□□□□ 0.59
LMNA-217ENST00000498722 CCDC144CPQ8IYA2 1237 aa18.71■□□□□ 0.59
LMNA-217ENST00000498722 UNC93B1Q9H1C4 597 aa18.71■□□□□ 0.59
LMNA-217ENST00000498722 FLRT1Q9NZU1 646 aa18.71■□□□□ 0.59
LMNA-217ENST00000498722 PALM3A6NDB9 673 aaPredicted RBP18.7■□□□□ 0.58
LMNA-217ENST00000498722 HOXC6P09630 235 aa18.7■□□□□ 0.58
LMNA-217ENST00000498722 CALM1P0DP23 149 aa18.7■□□□□ 0.58
LMNA-217ENST00000498722 CALM2P0DP24 149 aa18.7■□□□□ 0.58
LMNA-217ENST00000498722 CALM3P0DP25 149 aa18.7■□□□□ 0.58
LMNA-217ENST00000498722 MUM1L1Q5H9M0 696 aa18.7■□□□□ 0.58
LMNA-217ENST00000498722 NSMFQ6X4W1 530 aa18.7■□□□□ 0.58
LMNA-217ENST00000498722 MICU3Q86XE3 530 aa18.7■□□□□ 0.58
LMNA-217ENST00000498722 HOMER1Q86YM7 354 aa18.7■□□□□ 0.58
LMNA-217ENST00000498722 FBXL16Q8N461 479 aa18.7■□□□□ 0.58
LMNA-217ENST00000498722 PNMA2Q9UL42 364 aa18.7■□□□□ 0.58
LMNA-217ENST00000498722 POTEFA5A3E0 1075 aa18.69■□□□□ 0.58
LMNA-217ENST00000498722 QRICH1Q2TAL8 776 aa18.69■□□□□ 0.58
LMNA-217ENST00000498722 PIBF1Q8WXW3 757 aa18.69■□□□□ 0.58
LMNA-217ENST00000498722 AGXT2Q9BYV1 514 aa18.69■□□□□ 0.58
LMNA-217ENST00000498722 JMJD4Q9H9V9 463 aa18.69■□□□□ 0.58
LMNA-217ENST00000498722 HMX1Q9NP08 348 aaPredicted RBP18.69■□□□□ 0.58
LMNA-217ENST00000498722 CYP2C19P33261 490 aa18.68■□□□□ 0.58
LMNA-217ENST00000498722 CACNB2Q08289 660 aaPredicted RBP18.68■□□□□ 0.58
LMNA-217ENST00000498722 ME3Q16798 604 aa18.68■□□□□ 0.58
LMNA-217ENST00000498722 FBXO11Q86XK2 927 aa18.68■□□□□ 0.58
LMNA-217ENST00000498722 MAML3Q96JK9 1138 aa18.68■□□□□ 0.58
LMNA-217ENST00000498722 A1CFQ9NQ94 594 aaKnown RBP18.68■□□□□ 0.58
LMNA-217ENST00000498722 TPCN1Q9ULQ1 816 aa18.68■□□□□ 0.58
LMNA-217ENST00000498722 PFASO15067 1338 aa18.68■□□□□ 0.58
LMNA-217ENST00000498722 KLF18A0A0U1RQI7 1052 aa18.67■□□□□ 0.58
LMNA-217ENST00000498722 PTPDC1A2A3K4 754 aa18.67■□□□□ 0.58
LMNA-217ENST00000498722 CNGA1P29973 690 aa18.67■□□□□ 0.58
LMNA-217ENST00000498722 NBR1Q14596 966 aa18.67■□□□□ 0.58
LMNA-217ENST00000498722 OLFML2BQ68BL8 750 aa18.67■□□□□ 0.58
LMNA-217ENST00000498722 APOA5Q6Q788 366 aa18.67■□□□□ 0.58
LMNA-217ENST00000498722 SGMS1Q86VZ5 419 aa18.67■□□□□ 0.58
LMNA-217ENST00000498722 MAP3K14Q99558 947 aa18.67■□□□□ 0.58
LMNA-217ENST00000498722 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.67■□□□□ 0.58
LMNA-217ENST00000498722 SMC3Q9UQE7 1217 aa18.67■□□□□ 0.58
LMNA-217ENST00000498722 RPTORQ8N122 1335 aa18.67■□□□□ 0.58
LMNA-217ENST00000498722 POTEB2H3BUK9 544 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 NFIBO00712 420 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 ZBTB5O15062 677 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 ZBTB43O43298 467 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 LARGE1O95461 756 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 PDIA4P13667 645 aaKnown RBP18.66■□□□□ 0.58
LMNA-217ENST00000498722 GNAQP50148 359 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 ZNF792Q3KQV3 632 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 CCDC83Q8IWF9 413 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 FANCBQ8NB91 859 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 BRF1Q92994 677 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 DEFB118Q96PH6 123 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 GBP4Q96PP9 640 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 PIGSQ96S52 555 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 LARP6Q9BRS8 491 aaKnown RBP18.66■□□□□ 0.58
LMNA-217ENST00000498722 BRPF3Q9ULD4 1205 aa18.66■□□□□ 0.58
LMNA-217ENST00000498722 ABCB11O95342 1321 aa18.65■□□□□ 0.58
LMNA-217ENST00000498722 PLEKHA8P1O95397 391 aa18.65■□□□□ 0.58
LMNA-217ENST00000498722 EN2P19622 333 aaPredicted RBP18.65■□□□□ 0.58
LMNA-217ENST00000498722 CCND3P30281 292 aaPredicted RBP18.65■□□□□ 0.58
LMNA-217ENST00000498722 CNTN2Q02246 1040 aa18.65■□□□□ 0.58
LMNA-217ENST00000498722 APOBRQ0VD83 1088 aa18.65■□□□□ 0.58
LMNA-217ENST00000498722 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.65■□□□□ 0.58
LMNA-217ENST00000498722 CMTR1Q8N1G2 835 aaKnown RBP18.65■□□□□ 0.58
LMNA-217ENST00000498722 CCDC82Q8N4S0 544 aa18.65■□□□□ 0.58
LMNA-217ENST00000498722 AMNQ9BXJ7 453 aa18.65■□□□□ 0.58
LMNA-217ENST00000498722 SEC63Q9UGP8 760 aaKnown RBP18.65■□□□□ 0.58
LMNA-217ENST00000498722 DIS3Q9Y2L1 958 aaKnown RBP18.65■□□□□ 0.58
LMNA-217ENST00000498722 DNAJC25-GNG10A0A024R161 153 aa18.64■□□□□ 0.57
LMNA-217ENST00000498722 GOLGA8AA7E2F4 631 aa18.64■□□□□ 0.57
LMNA-217ENST00000498722 GOLGA8BA8MQT2 603 aa18.64■□□□□ 0.57
LMNA-217ENST00000498722 GJB1P08034 283 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms