RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 ZNF543Q08ER8 600 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 GPATCH4Q5T3I0 446 aaKnown RBP9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 CCDC144CPQ8IYA2 1237 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 FERMT2Q96AC1 680 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 LENG1Q96BZ8 264 aaPredicted RBP9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 KRT23Q9C075 422 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 KAT14Q9H8E8 782 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 CNNM2Q9H8M5 875 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 CYP39A1Q9NYL5 469 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 ZSWIM5Q9P217 1185 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 PRKAG2Q9UGJ0 569 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 PHF24Q9UPV7 400 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 ATP11BQ9Y2G3 1177 aa9.95□□□□□ -0.82
HMGXB4-207ENST00000498212 DNAH12Q6ZR08 3092 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 KIAA1217Q5T5P2 1943 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 TNKSO95271 1327 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 SYNRGQ9UMZ2 1314 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 SOWAHBA6NEL2 793 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 DUSP11O75319 330 aaKnown RBP9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 CHMLP26374 656 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 SNX17Q15036 470 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 CCDC144BQ3MJ40 725 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 TRIM60Q495X7 471 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 C1orf53Q5VUE5 145 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 NSMFQ6X4W1 530 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 PNMA1Q8ND90 353 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 ZSCAN10Q96SZ4 725 aaPredicted RBP9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 TSEN34Q9BSV6 310 aaKnown RBP9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 UBE2OQ9C0C9 1292 aaKnown RBP9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 PCDH10Q9P2E7 1040 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 PNMA2Q9UL42 364 aa9.94□□□□□ -0.82
HMGXB4-207ENST00000498212 TRIOBPQ9H2D6 2365 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 ASTN1O14525 1302 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 A0A1W2PQ45 241 aaPredicted RBP9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 A0A1W2PQY0 241 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 MOXD2PA6NHM9 499 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 C6orf222P0C671 652 aaPredicted RBP9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 GOLGA8HP0CJ92 632 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 ACLYP53396 1101 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 MDM2Q00987 491 aaPredicted RBP9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 TDHQ8IZJ6 230 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 ENAHQ8N8S7 591 aaPredicted RBP9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 KLHDC9Q8NEP7 349 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 NUP133Q8WUM0 1156 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 ANKS1AQ92625 1134 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 LBHD1Q9BQE6 289 aaPredicted RBP9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 UBAC1Q9BSL1 405 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 UBA5Q9GZZ9 404 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 KATNBL1Q9H079 304 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 SPC25Q9HBM1 224 aa9.93□□□□□ -0.82
HMGXB4-207ENST00000498212 WDR19Q8NEZ3 1342 aa9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 PTPDC1A2A3K4 754 aa9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 NFIBO00712 420 aa9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 ADCY6O43306 1168 aa9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 CST5P28325 142 aaPredicted RBP9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 GJA9P57773 515 aa9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 PTH1RQ03431 593 aa9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 TRDNQ13061 729 aa9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 BAATQ14032 418 aaPredicted RBP9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 KCNA10Q16322 511 aa9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 ASPRV1Q53RT3 343 aa9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 CCSAPQ6IQ19 270 aaPredicted RBP9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 PCSK9Q8NBP7 692 aaKnown RBP9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 UPF3AQ9H1J1 476 aaKnown RBP9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 PRDM5Q9NQX1 630 aaPredicted RBP9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 STARD7Q9NQZ5 370 aa9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 ADD3Q9UEY8 706 aaKnown RBP9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 MYH7BA7E2Y1 1941 aa9.92□□□□□ -0.82
HMGXB4-207ENST00000498212 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 MYADML2A6NDP7 307 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 SOX1O00570 391 aaPredicted RBP9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 SGSM2O43147 1006 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 ASGR1P07306 291 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 CYP21A2P08686 494 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 PARP1P09874 1014 aaKnown RBP9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 ALDH5A1P51649 535 aaPredicted RBP9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 IRX5P78411 483 aaPredicted RBP9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 TNFAIP2Q03169 654 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 TLE2Q04725 743 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 CDC37Q16543 378 aaPredicted RBP9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 USH1GQ495M9 461 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 GNASQ5JWF2 1037 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 IFIT1BQ5T764 474 aaKnown RBP9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 SLC30A10Q6XR72 485 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 RNF207Q6ZRF8 634 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 NOL8Q76FK4 1167 aaKnown RBP9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 EEPD1Q7L9B9 569 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 FBXO16Q8IX29 292 aaPredicted RBP9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 MORC4Q8TE76 937 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 CLEC4DQ8WXI8 215 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 LRCH3Q96II8 777 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 GLT1D1Q96MS3 346 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 PURBQ96QR8 312 aaKnown RBP9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 CPVLQ9H3G5 476 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 PDLIM7Q9NR12 457 aa9.91□□□□□ -0.82
HMGXB4-207ENST00000498212 LOC102724159A0A0B4J2E5 919 aa9.9□□□□□ -0.82
HMGXB4-207ENST00000498212 TRIM43BA6NCK2 446 aa9.9□□□□□ -0.82
HMGXB4-207ENST00000498212 DHX16O60231 1041 aaKnown RBP9.9□□□□□ -0.82
HMGXB4-207ENST00000498212 PQBP1O60828 265 aaKnown RBP9.9□□□□□ -0.82
HMGXB4-207ENST00000498212 CLTBP09497 229 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms