RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 BAZ2BQ9UIF8 2168 aaKnown RBP18.52■□□□□ 0.56
SSBP1-214ENST00000498107 PFASO15067 1338 aa18.52■□□□□ 0.56
SSBP1-214ENST00000498107 ZNF236Q9UL36 1845 aa18.52■□□□□ 0.56
SSBP1-214ENST00000498107 CYTH3O43739 400 aa18.52■□□□□ 0.56
SSBP1-214ENST00000498107 PLEKHA8P1O95397 391 aa18.52■□□□□ 0.56
SSBP1-214ENST00000498107 HOXC6P09630 235 aa18.52■□□□□ 0.56
SSBP1-214ENST00000498107 ADORA2AP29274 412 aa18.52■□□□□ 0.56
SSBP1-214ENST00000498107 AK2P54819 239 aa18.52■□□□□ 0.56
SSBP1-214ENST00000498107 CPLX2Q6PUV4 134 aaKnown RBP18.52■□□□□ 0.56
SSBP1-214ENST00000498107 NBPF11Q86T75 865 aa18.52■□□□□ 0.56
SSBP1-214ENST00000498107 SRBD1Q8N5C6 995 aaKnown RBP18.52■□□□□ 0.56
SSBP1-214ENST00000498107 SLAIN1Q8ND83 568 aa18.52■□□□□ 0.56
SSBP1-214ENST00000498107 USP6NLQ92738 828 aa18.52■□□□□ 0.56
SSBP1-214ENST00000498107 RBM27Q9P2N5 1060 aaKnown RBP18.52■□□□□ 0.56
SSBP1-214ENST00000498107 HPS5Q9UPZ3 1129 aa18.52■□□□□ 0.56
SSBP1-214ENST00000498107 MRPL11Q9Y3B7 192 aaKnown RBP18.52■□□□□ 0.56
SSBP1-214ENST00000498107 PTCH2Q9Y6C5 1203 aa18.52■□□□□ 0.56
SSBP1-214ENST00000498107 ADCY3O60266 1144 aa18.51■□□□□ 0.55
SSBP1-214ENST00000498107 CYP2B6P20813 491 aa18.51■□□□□ 0.55
SSBP1-214ENST00000498107 USH1GQ495M9 461 aa18.51■□□□□ 0.55
SSBP1-214ENST00000498107 KIF2CQ99661 725 aa18.51■□□□□ 0.55
SSBP1-214ENST00000498107 PCDHA1Q9Y5I3 950 aa18.51■□□□□ 0.55
SSBP1-214ENST00000498107 ZNFX1Q9P2E3 1918 aaKnown RBP18.51■□□□□ 0.55
SSBP1-214ENST00000498107 CPLX1O14810 134 aa18.5■□□□□ 0.55
SSBP1-214ENST00000498107 ST18O60284 1047 aa18.5■□□□□ 0.55
SSBP1-214ENST00000498107 CDC27P30260 824 aa18.5■□□□□ 0.55
SSBP1-214ENST00000498107 GRK4P32298 578 aa18.5■□□□□ 0.55
SSBP1-214ENST00000498107 SLC35G1Q2M3R5 365 aa18.5■□□□□ 0.55
SSBP1-214ENST00000498107 SLC9C1Q4G0N8 1177 aa18.5■□□□□ 0.55
SSBP1-214ENST00000498107 MCF2L2Q86YR7 1114 aa18.5■□□□□ 0.55
SSBP1-214ENST00000498107 CCDC82Q8N4S0 544 aa18.5■□□□□ 0.55
SSBP1-214ENST00000498107 RGS22Q8NE09 1264 aa18.5■□□□□ 0.55
SSBP1-214ENST00000498107 SLKQ9H2G2 1235 aaPredicted RBP18.5■□□□□ 0.55
SSBP1-214ENST00000498107 DIS3Q9Y2L1 958 aaKnown RBP18.5■□□□□ 0.55
SSBP1-214ENST00000498107 ADD1P35611 737 aaKnown RBP18.49■□□□□ 0.55
SSBP1-214ENST00000498107 AKAP17AQ02040 695 aaKnown RBP18.49■□□□□ 0.55
SSBP1-214ENST00000498107 CMTR1Q8N1G2 835 aaKnown RBP18.49■□□□□ 0.55
SSBP1-214ENST00000498107 SAMD3Q8N6K7 520 aa18.49■□□□□ 0.55
SSBP1-214ENST00000498107 A1CFQ9NQ94 594 aaKnown RBP18.49■□□□□ 0.55
SSBP1-214ENST00000498107 FAM217BQ9NTX9 383 aaPredicted RBP18.49■□□□□ 0.55
SSBP1-214ENST00000498107 POTEB2H3BUK9 544 aa18.48■□□□□ 0.55
SSBP1-214ENST00000498107 hCG_1984214I3L0E3 225 aa18.48■□□□□ 0.55
SSBP1-214ENST00000498107 CDKL5O76039 1030 aa18.48■□□□□ 0.55
SSBP1-214ENST00000498107 UBXN2AP68543 259 aa18.48■□□□□ 0.55
SSBP1-214ENST00000498107 CCT2P78371 535 aaKnown RBP18.48■□□□□ 0.55
SSBP1-214ENST00000498107 MUM1L1Q5H9M0 696 aa18.48■□□□□ 0.55
SSBP1-214ENST00000498107 NSMFQ6X4W1 530 aa18.48■□□□□ 0.55
SSBP1-214ENST00000498107 ZNF713Q8N859 430 aaPredicted RBP18.48■□□□□ 0.55
SSBP1-214ENST00000498107 PIBF1Q8WXW3 757 aa18.48■□□□□ 0.55
SSBP1-214ENST00000498107 MAP3K20Q9NYL2 800 aaKnown RBP18.48■□□□□ 0.55
SSBP1-214ENST00000498107 BIN2Q9UBW5 565 aaPredicted RBP18.48■□□□□ 0.55
SSBP1-214ENST00000498107 TPCN1Q9ULQ1 816 aa18.48■□□□□ 0.55
SSBP1-214ENST00000498107 CNTNAP5Q8WYK1 1306 aa18.48■□□□□ 0.55
SSBP1-214ENST00000498107 SMCHD1A6NHR9 2005 aa18.47■□□□□ 0.55
SSBP1-214ENST00000498107 PFKFB2O60825 505 aa18.47■□□□□ 0.55
SSBP1-214ENST00000498107 COBLO75128 1261 aa18.47■□□□□ 0.55
SSBP1-214ENST00000498107 HMGCRP04035 888 aa18.47■□□□□ 0.55
SSBP1-214ENST00000498107 IFNAR1P17181 557 aa18.47■□□□□ 0.55
SSBP1-214ENST00000498107 FUT2Q10981 343 aa18.47■□□□□ 0.55
SSBP1-214ENST00000498107 STK3Q13188 491 aa18.47■□□□□ 0.55
SSBP1-214ENST00000498107 OLFML2BQ68BL8 750 aa18.47■□□□□ 0.55
SSBP1-214ENST00000498107 RNF207Q6ZRF8 634 aa18.47■□□□□ 0.55
SSBP1-214ENST00000498107 TRIM22Q8IYM9 498 aa18.47■□□□□ 0.55
SSBP1-214ENST00000498107 CLEC4DQ8WXI8 215 aa18.47■□□□□ 0.55
SSBP1-214ENST00000498107 LARP6Q9BRS8 491 aaKnown RBP18.47■□□□□ 0.55
SSBP1-214ENST00000498107 CYP39A1Q9NYL5 469 aa18.47■□□□□ 0.55
SSBP1-214ENST00000498107 LIMCH1Q9UPQ0 1083 aa18.47■□□□□ 0.55
SSBP1-214ENST00000498107 DNAJC25-GNG10A0A024R161 153 aa18.46■□□□□ 0.55
SSBP1-214ENST00000498107 PTPDC1A2A3K4 754 aa18.46■□□□□ 0.55
SSBP1-214ENST00000498107 NFIBO00712 420 aa18.46■□□□□ 0.55
SSBP1-214ENST00000498107 PRPF3O43395 683 aaKnown RBP18.46■□□□□ 0.55
SSBP1-214ENST00000498107 PPP1R11O60927 126 aaPredicted RBP18.46■□□□□ 0.55
SSBP1-214ENST00000498107 PGK2P07205 417 aa18.46■□□□□ 0.55
SSBP1-214ENST00000498107 ZNF792Q3KQV3 632 aa18.46■□□□□ 0.55
SSBP1-214ENST00000498107 MFSD14CQ5VZR4 134 aa18.46■□□□□ 0.55
SSBP1-214ENST00000498107 ZNF467Q7Z7K2 595 aaPredicted RBP18.46■□□□□ 0.55
SSBP1-214ENST00000498107 MSL3Q8N5Y2 521 aaKnown RBP18.46■□□□□ 0.55
SSBP1-214ENST00000498107 ARMC5Q96C12 935 aa18.46■□□□□ 0.55
SSBP1-214ENST00000498107 ZSCAN31Q96LW9 406 aaPredicted RBP18.46■□□□□ 0.55
SSBP1-214ENST00000498107 RNF26Q9BY78 433 aaPredicted RBP18.46■□□□□ 0.55
SSBP1-214ENST00000498107 NCOA5Q9HCD5 579 aaKnown RBP18.46■□□□□ 0.55
SSBP1-214ENST00000498107 ADD3Q9UEY8 706 aaKnown RBP18.46■□□□□ 0.55
SSBP1-214ENST00000498107 V9GY48 417 aaPredicted RBP18.46■□□□□ 0.55
SSBP1-214ENST00000498107 ELNP15502 786 aa18.45■□□□□ 0.54
SSBP1-214ENST00000498107 MCM2P49736 904 aa18.45■□□□□ 0.54
SSBP1-214ENST00000498107 NTRK3Q16288 839 aa18.45■□□□□ 0.54
SSBP1-214ENST00000498107 NOL8Q76FK4 1167 aaKnown RBP18.45■□□□□ 0.54
SSBP1-214ENST00000498107 TEX2Q8IWB9 1127 aa18.45■□□□□ 0.54
SSBP1-214ENST00000498107 NPLOC4Q8TAT6 608 aa18.45■□□□□ 0.54
SSBP1-214ENST00000498107 MAML3Q96JK9 1138 aa18.45■□□□□ 0.54
SSBP1-214ENST00000498107 MPHOSPH6Q99547 160 aaKnown RBP18.45■□□□□ 0.54
SSBP1-214ENST00000498107 PLXNA1Q9UIW2 1896 aa18.45■□□□□ 0.54
SSBP1-214ENST00000498107 LOC102724159A0A0B4J2E5 919 aa18.44■□□□□ 0.54
SSBP1-214ENST00000498107 B4DLN1 442 aa18.44■□□□□ 0.54
SSBP1-214ENST00000498107 TAL1P17542 331 aaPredicted RBP18.44■□□□□ 0.54
SSBP1-214ENST00000498107 MRPL12P52815 198 aaKnown RBP18.44■□□□□ 0.54
SSBP1-214ENST00000498107 RPS6P62753 249 aaKnown RBP18.44■□□□□ 0.54
SSBP1-214ENST00000498107 SSRP1Q08945 709 aaKnown RBP18.44■□□□□ 0.54
SSBP1-214ENST00000498107 SCRN1Q12765 414 aa18.44■□□□□ 0.54
SSBP1-214ENST00000498107 BAATQ14032 418 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms