RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 WTAPQ15007 396 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 ASPRV1Q53RT3 343 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 SYDE2Q5VT97 1194 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 ADGRD1Q6QNK2 874 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 CPXCR1Q8N123 301 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 IGDCC4Q8TDY8 1250 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 KCNB2Q92953 911 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 RANBP17Q9H2T7 1088 aaKnown RBP13.15□□□□□ -0.3
ERCC8-208ENST00000497892 RAVER2Q9HCJ3 691 aaKnown RBP13.15□□□□□ -0.3
ERCC8-208ENST00000497892 GPCPD1Q9NPB8 672 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 CTDP1Q9Y5B0 961 aaPredicted RBP13.15□□□□□ -0.3
ERCC8-208ENST00000497892 HMGCRP04035 888 aa13.14□□□□□ -0.31
ERCC8-208ENST00000497892 INHAP05111 366 aa13.14□□□□□ -0.31
ERCC8-208ENST00000497892 GOLGA8HP0CJ92 632 aa13.14□□□□□ -0.31
ERCC8-208ENST00000497892 FCER1AP12319 257 aa13.14□□□□□ -0.31
ERCC8-208ENST00000497892 CYP2B6P20813 491 aa13.14□□□□□ -0.31
ERCC8-208ENST00000497892 ADORA2AP29274 412 aa13.14□□□□□ -0.31
ERCC8-208ENST00000497892 KRT32Q14532 448 aa13.14□□□□□ -0.31
ERCC8-208ENST00000497892 TRIB2Q92519 343 aa13.14□□□□□ -0.31
ERCC8-208ENST00000497892 TMEM87BQ96K49 555 aa13.14□□□□□ -0.31
ERCC8-208ENST00000497892 LY9Q9HBG7 655 aa13.14□□□□□ -0.31
ERCC8-208ENST00000497892 SENP2Q9HC62 589 aa13.14□□□□□ -0.31
ERCC8-208ENST00000497892 RIPK3Q9Y572 518 aa13.14□□□□□ -0.31
ERCC8-208ENST00000497892 WDR19Q8NEZ3 1342 aa13.13□□□□□ -0.31
ERCC8-208ENST00000497892 MYH6P13533 1939 aa13.13□□□□□ -0.31
ERCC8-208ENST00000497892 SH2B2O14492 632 aaPredicted RBP13.13□□□□□ -0.31
ERCC8-208ENST00000497892 ICAM1P05362 532 aa13.13□□□□□ -0.31
ERCC8-208ENST00000497892 PARP1P09874 1014 aaKnown RBP13.13□□□□□ -0.31
ERCC8-208ENST00000497892 PSEN2P49810 448 aa13.13□□□□□ -0.31
ERCC8-208ENST00000497892 UBXN2AP68543 259 aa13.13□□□□□ -0.31
ERCC8-208ENST00000497892 TROAPQ12815 778 aa13.13□□□□□ -0.31
ERCC8-208ENST00000497892 KCTD2Q14681 263 aa13.13□□□□□ -0.31
ERCC8-208ENST00000497892 ADCK5Q3MIX3 580 aa13.13□□□□□ -0.31
ERCC8-208ENST00000497892 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.13□□□□□ -0.31
ERCC8-208ENST00000497892 TRMT44Q8IYL2 757 aaKnown RBP13.13□□□□□ -0.31
ERCC8-208ENST00000497892 NEK1Q96PY6 1258 aa13.13□□□□□ -0.31
ERCC8-208ENST00000497892 MMP19Q99542 508 aa13.13□□□□□ -0.31
ERCC8-208ENST00000497892 SMCHD1A6NHR9 2005 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 TK2O00142 265 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 LIFRP42702 1097 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 SOX10P56693 466 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 SNAP25P60880 206 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 GRM4Q14833 912 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 CCL14Q16627 93 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 DMRTA1Q5VZB9 504 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 CCDC174Q6PII3 467 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 CHST13Q8NET6 341 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
ERCC8-208ENST00000497892 AGBL1Q96MI9 1066 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
ERCC8-208ENST00000497892 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 BIN2Q9UBW5 565 aaPredicted RBP13.12□□□□□ -0.31
ERCC8-208ENST00000497892 FBXO40Q9UH90 709 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 SNX14Q9Y5W7 946 aa13.12□□□□□ -0.31
ERCC8-208ENST00000497892 PALM3A6NDB9 673 aaPredicted RBP13.11□□□□□ -0.31
ERCC8-208ENST00000497892 COBLO75128 1261 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 DDAH1O94760 285 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 MYCP01106 439 aaPredicted RBP13.11□□□□□ -0.31
ERCC8-208ENST00000497892 IGHA2P01877 340 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 HMGB1P09429 215 aaKnown RBP13.11□□□□□ -0.31
ERCC8-208ENST00000497892 CCL5P13501 91 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 SLC4A3P48751 1232 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 MFSD10Q14728 455 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 MTFR1Q15390 333 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 TKFCQ3LXA3 575 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 MAP3K21Q5TCX8 1036 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 DHX32Q7L7V1 743 aaKnown RBP13.11□□□□□ -0.31
ERCC8-208ENST00000497892 CATIPQ7Z7H3 387 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 DPP9Q86TI2 863 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 ZNF654Q8IZM8 581 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 TMTC2Q8N394 836 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 STAG2Q8N3U4 1231 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 NPLOC4Q8TAT6 608 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 USP26Q9BXU7 913 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 ACAD9Q9H845 621 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 HOMER2Q9NSB8 354 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 RNF146Q9NTX7 359 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 SLC5A4Q9NY91 659 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 FLRT1Q9NZU1 646 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 MAD2L2Q9UI95 211 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 PNMA2Q9UL42 364 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 CCPG1Q9ULG6 757 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 LCTP09848 1927 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 FRMPD3Q5JV73 1810 aa13.11□□□□□ -0.31
ERCC8-208ENST00000497892 DNAJC25-GNG10A0A024R161 153 aa13.1□□□□□ -0.31
ERCC8-208ENST00000497892 KLRF2D3W0D1 207 aa13.1□□□□□ -0.31
ERCC8-208ENST00000497892 PGK2P07205 417 aa13.1□□□□□ -0.31
ERCC8-208ENST00000497892 ALAS1P13196 640 aa13.1□□□□□ -0.31
ERCC8-208ENST00000497892 EXOSC10Q01780 885 aaKnown RBP13.1□□□□□ -0.31
ERCC8-208ENST00000497892 TRIM32Q13049 653 aa13.1□□□□□ -0.31
ERCC8-208ENST00000497892 CDC37Q16543 378 aaPredicted RBP13.1□□□□□ -0.31
ERCC8-208ENST00000497892 OLFML2BQ68BL8 750 aa13.1□□□□□ -0.31
ERCC8-208ENST00000497892 SGMS1Q86VZ5 419 aa13.1□□□□□ -0.31
ERCC8-208ENST00000497892 ADGRF4Q8IZF3 695 aa13.1□□□□□ -0.31
ERCC8-208ENST00000497892 MAML3Q96JK9 1138 aa13.1□□□□□ -0.31
ERCC8-208ENST00000497892 MAP3K14Q99558 947 aa13.1□□□□□ -0.31
ERCC8-208ENST00000497892 UBA5Q9GZZ9 404 aa13.1□□□□□ -0.31
ERCC8-208ENST00000497892 UNC93B1Q9H1C4 597 aa13.1□□□□□ -0.31
ERCC8-208ENST00000497892 PAK6Q9NQU5 681 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms