RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 EDNRBP24530 442 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 CST5P28325 142 aaPredicted RBP12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 TAPT1Q6NXT6 567 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 CCDC174Q6PII3 467 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 ARMCX2Q7L311 632 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 CCDC144CPQ8IYA2 1237 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 ADGRF4Q8IZF3 695 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 STAG2Q8N3U4 1231 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 DPF3Q92784 378 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 KCNB2Q92953 911 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 GDF15Q99988 308 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 UPF3AQ9H1J1 476 aaKnown RBP12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 RIOX1Q9H6W3 641 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 KAT14Q9H8E8 782 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 SENP2Q9HC62 589 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 CCPG1Q9ULG6 757 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 PHF24Q9UPV7 400 aa12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 CTDP1Q9Y5B0 961 aaPredicted RBP12.76□□□□□ -0.37
SHROOM3-210ENST00000497440 RBM47A0AV96 593 aaKnown RBP12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 SLC27A2O14975 620 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 EVI5O60447 810 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 SMARCA1P28370 1054 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 CNGA1P29973 690 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 BMP8BP34820 402 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 TRDNQ13061 729 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 IKQ13123 557 aaPredicted RBP12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 LRRC26Q2I0M4 334 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 IFIT1BQ5T764 474 aaKnown RBP12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 CHMP4CQ96CF2 233 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 UBAC1Q9BSL1 405 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 TSEN34Q9BSV6 310 aaKnown RBP12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 UBA5Q9GZZ9 404 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 CPVLQ9H3G5 476 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 HOMER2Q9NSB8 354 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 FAM184BQ9ULE4 1060 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 GNEQ9Y223 722 aaKnown RBP12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 CNPY2Q9Y2B0 182 aa12.75□□□□□ -0.37
SHROOM3-210ENST00000497440 ASB14A6NK59 587 aa12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 OPLAHO14841 1288 aa12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 CYTH3O43739 400 aa12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 PARP1P09874 1014 aaKnown RBP12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 RARBP10826 455 aa12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 LIFRP42702 1097 aa12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 GJA9P57773 515 aa12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 RPS6P62753 249 aaKnown RBP12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 BAATQ14032 418 aaPredicted RBP12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 GRM4Q14833 912 aa12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 CCDC144BQ3MJ40 725 aa12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 HABP4Q5JVS0 413 aaKnown RBP12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 CREB3L3Q68CJ9 461 aa12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 DNERQ8NFT8 737 aa12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 CCDC136Q96JN2 1154 aa12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 PURBQ96QR8 312 aaKnown RBP12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 LY9Q9HBG7 655 aa12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 COLQQ9Y215 455 aaPredicted RBP12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 MTMR7Q9Y216 660 aa12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 BAZ2BQ9UIF8 2168 aaKnown RBP12.74□□□□□ -0.37
SHROOM3-210ENST00000497440 A0A1W2PPC1 479 aa12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 KLRF2D3W0D1 207 aa12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 IFIT3O14879 490 aaKnown RBP12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 EXOSC10Q01780 885 aaKnown RBP12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 CDC37Q16543 378 aaPredicted RBP12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 QRICH1Q2TAL8 776 aa12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 GJC2Q5T442 439 aaPredicted RBP12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 ANO1Q5XXA6 986 aa12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 SLC39A5Q6ZMH5 540 aa12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 KIAA1211Q6ZU35 1233 aa12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 SGMS1Q86VZ5 419 aa12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 SENP6Q9GZR1 1112 aaPredicted RBP12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 XPNPEP3Q9NQH7 507 aa12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 Q9Y3F1 56 aa12.73□□□□□ -0.37
SHROOM3-210ENST00000497440 SYNRGQ9UMZ2 1314 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 EPB41L2O43491 1005 aaKnown RBP12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 PPP1R11O60927 126 aaPredicted RBP12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 CDC45O75419 566 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 SLC34A2O95436 690 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 PGK1P00558 417 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 SLC4A3P48751 1232 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 CDK7P50613 346 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 IQSEC1Q6DN90 963 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 RNF207Q6ZRF8 634 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 RNF180Q86T96 592 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 TMTC2Q8N394 836 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 SAMD3Q8N6K7 520 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 TBC1D5Q92609 795 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 TMEM87BQ96K49 555 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 VTA1Q9NP79 307 aa12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 MAP3K20Q9NYL2 800 aaKnown RBP12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 ADD3Q9UEY8 706 aaKnown RBP12.72□□□□□ -0.37
SHROOM3-210ENST00000497440 LRRC37A2A6NM11 1700 aa12.71□□□□□ -0.37
SHROOM3-210ENST00000497440 ABCB11O95342 1321 aa12.71□□□□□ -0.37
SHROOM3-210ENST00000497440 MOXD2PA6NHM9 499 aa12.71□□□□□ -0.37
SHROOM3-210ENST00000497440 SH2B2O14492 632 aaPredicted RBP12.71□□□□□ -0.37
SHROOM3-210ENST00000497440 ZBTB5O15062 677 aa12.71□□□□□ -0.37
SHROOM3-210ENST00000497440 MCM5P33992 734 aa12.71□□□□□ -0.37
SHROOM3-210ENST00000497440 ADCYAP1R1P41586 468 aa12.71□□□□□ -0.37
SHROOM3-210ENST00000497440 ALDH5A1P51649 535 aaPredicted RBP12.71□□□□□ -0.37
SHROOM3-210ENST00000497440 HSD17B4P51659 736 aa12.71□□□□□ -0.37
SHROOM3-210ENST00000497440 WTAPQ15007 396 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms