RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SYN1P17600 705 aa18.41■□□□□ 0.54
HDAC4-213ENST00000496347 CST5P28325 142 aaPredicted RBP18.41■□□□□ 0.54
HDAC4-213ENST00000496347 ATN1P54259 1190 aaPredicted RBP18.41■□□□□ 0.54
HDAC4-213ENST00000496347 RTP1P59025 263 aa18.41■□□□□ 0.54
HDAC4-213ENST00000496347 TRDNQ13061 729 aa18.41■□□□□ 0.54
HDAC4-213ENST00000496347 PWP2Q15269 919 aaKnown RBP18.41■□□□□ 0.54
HDAC4-213ENST00000496347 TSEN34Q9BSV6 310 aaKnown RBP18.41■□□□□ 0.54
HDAC4-213ENST00000496347 KATNBL1Q9H079 304 aa18.41■□□□□ 0.54
HDAC4-213ENST00000496347 ADCYAP1R1P41586 468 aa18.4■□□□□ 0.54
HDAC4-213ENST00000496347 MAGEA10P43363 369 aaPredicted RBP18.4■□□□□ 0.54
HDAC4-213ENST00000496347 CCDC144BQ3MJ40 725 aa18.4■□□□□ 0.54
HDAC4-213ENST00000496347 IFIT1BQ5T764 474 aaKnown RBP18.4■□□□□ 0.54
HDAC4-213ENST00000496347 NSMFQ6X4W1 530 aa18.4■□□□□ 0.54
HDAC4-213ENST00000496347 ADD3Q9UEY8 706 aaKnown RBP18.4■□□□□ 0.54
HDAC4-213ENST00000496347 ASTN1O14525 1302 aa18.4■□□□□ 0.54
HDAC4-213ENST00000496347 SOWAHBA6NEL2 793 aa18.39■□□□□ 0.53
HDAC4-213ENST00000496347 MOXD2PA6NHM9 499 aa18.39■□□□□ 0.53
HDAC4-213ENST00000496347 NFIBO00712 420 aa18.39■□□□□ 0.53
HDAC4-213ENST00000496347 CYP21A2P08686 494 aa18.39■□□□□ 0.53
HDAC4-213ENST00000496347 PARP1P09874 1014 aaKnown RBP18.39■□□□□ 0.53
HDAC4-213ENST00000496347 PTH1RQ03431 593 aa18.39■□□□□ 0.53
HDAC4-213ENST00000496347 SLC39A5Q6ZMH5 540 aa18.39■□□□□ 0.53
HDAC4-213ENST00000496347 MAF1Q9H063 256 aa18.39■□□□□ 0.53
HDAC4-213ENST00000496347 UPF3AQ9H1J1 476 aaKnown RBP18.39■□□□□ 0.53
HDAC4-213ENST00000496347 SPC25Q9HBM1 224 aa18.39■□□□□ 0.53
HDAC4-213ENST00000496347 PRKAG2Q9UGJ0 569 aa18.39■□□□□ 0.53
HDAC4-213ENST00000496347 A0A1W2PQ45 241 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-213ENST00000496347 A0A1W2PQY0 241 aa18.38■□□□□ 0.53
HDAC4-213ENST00000496347 GOLGA8HP0CJ92 632 aa18.38■□□□□ 0.53
HDAC4-213ENST00000496347 SEC23AQ15436 765 aa18.38■□□□□ 0.53
HDAC4-213ENST00000496347 CDC37Q16543 378 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-213ENST00000496347 TRIM60Q495X7 471 aa18.38■□□□□ 0.53
HDAC4-213ENST00000496347 RALYLQ86SE5 291 aaKnown RBP18.38■□□□□ 0.53
HDAC4-213ENST00000496347 KLHDC9Q8NEP7 349 aa18.38■□□□□ 0.53
HDAC4-213ENST00000496347 MORC4Q8TE76 937 aa18.38■□□□□ 0.53
HDAC4-213ENST00000496347 CLEC4DQ8WXI8 215 aa18.38■□□□□ 0.53
HDAC4-213ENST00000496347 ATP11BQ9Y2G3 1177 aa18.38■□□□□ 0.53
HDAC4-213ENST00000496347 ADCY6O43306 1168 aa18.37■□□□□ 0.53
HDAC4-213ENST00000496347 ACLYP53396 1101 aa18.37■□□□□ 0.53
HDAC4-213ENST00000496347 GJA9P57773 515 aa18.37■□□□□ 0.53
HDAC4-213ENST00000496347 NKX3-2P78367 333 aa18.37■□□□□ 0.53
HDAC4-213ENST00000496347 SART3Q15020 963 aaKnown RBP18.37■□□□□ 0.53
HDAC4-213ENST00000496347 BMP2KLQ5H9B9 411 aa18.37■□□□□ 0.53
HDAC4-213ENST00000496347 SLC30A10Q6XR72 485 aa18.37■□□□□ 0.53
HDAC4-213ENST00000496347 PCSK9Q8NBP7 692 aaKnown RBP18.37■□□□□ 0.53
HDAC4-213ENST00000496347 NUP133Q8WUM0 1156 aa18.37■□□□□ 0.53
HDAC4-213ENST00000496347 VTA1Q9NP79 307 aa18.37■□□□□ 0.53
HDAC4-213ENST00000496347 PTPDC1A2A3K4 754 aa18.36■□□□□ 0.53
HDAC4-213ENST00000496347 ABCB11O95342 1321 aa18.36■□□□□ 0.53
HDAC4-213ENST00000496347 C6orf222P0C671 652 aaPredicted RBP18.36■□□□□ 0.53
HDAC4-213ENST00000496347 ALDH5A1P51649 535 aaPredicted RBP18.36■□□□□ 0.53
HDAC4-213ENST00000496347 BAATQ14032 418 aaPredicted RBP18.36■□□□□ 0.53
HDAC4-213ENST00000496347 CCSAPQ6IQ19 270 aaPredicted RBP18.36■□□□□ 0.53
HDAC4-213ENST00000496347 RNF207Q6ZRF8 634 aa18.36■□□□□ 0.53
HDAC4-213ENST00000496347 NCOA7Q8NI08 942 aa18.36■□□□□ 0.53
HDAC4-213ENST00000496347 MAP4K1Q92918 833 aa18.36■□□□□ 0.53
HDAC4-213ENST00000496347 FERMT2Q96AC1 680 aa18.36■□□□□ 0.53
HDAC4-213ENST00000496347 MPHOSPH6Q99547 160 aaKnown RBP18.36■□□□□ 0.53
HDAC4-213ENST00000496347 LBHD1Q9BQE6 289 aaPredicted RBP18.36■□□□□ 0.53
HDAC4-213ENST00000496347 ERICH2A1L162 156 aa18.35■□□□□ 0.53
HDAC4-213ENST00000496347 KIAA1211Q6ZU35 1233 aa18.35■□□□□ 0.53
HDAC4-213ENST00000496347 CYB5R4Q7L1T6 521 aa18.35■□□□□ 0.53
HDAC4-213ENST00000496347 TLK2Q86UE8 772 aa18.35■□□□□ 0.53
HDAC4-213ENST00000496347 FBXO16Q8IX29 292 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-213ENST00000496347 ADGRF4Q8IZF3 695 aa18.35■□□□□ 0.53
HDAC4-213ENST00000496347 TDHQ8IZJ6 230 aa18.35■□□□□ 0.53
HDAC4-213ENST00000496347 RGS22Q8NE09 1264 aa18.35■□□□□ 0.53
HDAC4-213ENST00000496347 DNERQ8NFT8 737 aa18.35■□□□□ 0.53
HDAC4-213ENST00000496347 UBE2OQ9C0C9 1292 aaKnown RBP18.35■□□□□ 0.53
HDAC4-213ENST00000496347 STARD7Q9NQZ5 370 aa18.35■□□□□ 0.53
HDAC4-213ENST00000496347 PDLIM7Q9NR12 457 aa18.35■□□□□ 0.53
HDAC4-213ENST00000496347 ELP1O95163 1332 aa18.34■□□□□ 0.53
HDAC4-213ENST00000496347 MROH7Q68CQ1 1323 aa18.34■□□□□ 0.53
HDAC4-213ENST00000496347 MYADML2A6NDP7 307 aa18.34■□□□□ 0.53
HDAC4-213ENST00000496347 E7EWF7 191 aa18.34■□□□□ 0.53
HDAC4-213ENST00000496347 RPS6P62753 249 aaKnown RBP18.34■□□□□ 0.53
HDAC4-213ENST00000496347 TNFAIP2Q03169 654 aa18.34■□□□□ 0.53
HDAC4-213ENST00000496347 USH1GQ495M9 461 aa18.34■□□□□ 0.53
HDAC4-213ENST00000496347 GLT1D1Q96MS3 346 aa18.34■□□□□ 0.53
HDAC4-213ENST00000496347 UBA5Q9GZZ9 404 aa18.34■□□□□ 0.53
HDAC4-213ENST00000496347 CPVLQ9H3G5 476 aa18.34■□□□□ 0.53
HDAC4-213ENST00000496347 GNEQ9Y223 722 aaKnown RBP18.34■□□□□ 0.53
HDAC4-213ENST00000496347 RBM8AQ9Y5S9 174 aaKnown RBP18.34■□□□□ 0.53
HDAC4-213ENST00000496347 DHX16O60231 1041 aaKnown RBP18.33■□□□□ 0.52
HDAC4-213ENST00000496347 CALML3P27482 149 aa18.33■□□□□ 0.52
HDAC4-213ENST00000496347 MDM2Q00987 491 aaPredicted RBP18.33■□□□□ 0.52
HDAC4-213ENST00000496347 KCNA10Q16322 511 aa18.33■□□□□ 0.52
HDAC4-213ENST00000496347 QRICH1Q2TAL8 776 aa18.33■□□□□ 0.52
HDAC4-213ENST00000496347 STOX1Q6ZVD7 989 aa18.33■□□□□ 0.52
HDAC4-213ENST00000496347 ANKRD33Q7Z3H0 272 aa18.33■□□□□ 0.52
HDAC4-213ENST00000496347 ESYT1Q9BSJ8 1104 aa18.33■□□□□ 0.52
HDAC4-213ENST00000496347 PRDM5Q9NQX1 630 aaPredicted RBP18.33■□□□□ 0.52
HDAC4-213ENST00000496347 Q9Y3F1 56 aa18.33■□□□□ 0.52
HDAC4-213ENST00000496347 KIAA1217Q5T5P2 1943 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.32■□□□□ 0.52
HDAC4-213ENST00000496347 B4DLN1 442 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 IFIT3O14879 490 aaKnown RBP18.32■□□□□ 0.52
HDAC4-213ENST00000496347 CTAGE5O15320 804 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 CLTBP09497 229 aa18.32■□□□□ 0.52
HDAC4-213ENST00000496347 EDNRBP24530 442 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms