RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 SNHG28P0DPA3 235 aa14.95□□□□□ -0.02
PTPRF-214ENST00000496043 GJA9P57773 515 aa14.95□□□□□ -0.02
PTPRF-214ENST00000496043 TNFAIP2Q03169 654 aa14.95□□□□□ -0.02
PTPRF-214ENST00000496043 CCSAPQ6IQ19 270 aaPredicted RBP14.95□□□□□ -0.02
PTPRF-214ENST00000496043 NOL8Q76FK4 1167 aaKnown RBP14.95□□□□□ -0.02
PTPRF-214ENST00000496043 LRCH3Q96II8 777 aa14.95□□□□□ -0.02
PTPRF-214ENST00000496043 ZSCAN10Q96SZ4 725 aaPredicted RBP14.95□□□□□ -0.02
PTPRF-214ENST00000496043 KAT14Q9H8E8 782 aa14.95□□□□□ -0.02
PTPRF-214ENST00000496043 CNNM2Q9H8M5 875 aa14.95□□□□□ -0.02
PTPRF-214ENST00000496043 PRDM5Q9NQX1 630 aaPredicted RBP14.95□□□□□ -0.02
PTPRF-214ENST00000496043 STARD7Q9NQZ5 370 aa14.95□□□□□ -0.02
PTPRF-214ENST00000496043 B4E1Z4 1266 aa14.94□□□□□ -0.02
PTPRF-214ENST00000496043 GSPT1P15170 499 aaKnown RBP14.94□□□□□ -0.02
PTPRF-214ENST00000496043 CST5P28325 142 aaPredicted RBP14.94□□□□□ -0.02
PTPRF-214ENST00000496043 BAATQ14032 418 aaPredicted RBP14.94□□□□□ -0.02
PTPRF-214ENST00000496043 GNASQ5JWF2 1037 aa14.94□□□□□ -0.02
PTPRF-214ENST00000496043 IQSEC1Q6DN90 963 aa14.94□□□□□ -0.02
PTPRF-214ENST00000496043 GPR153Q6NV75 609 aa14.94□□□□□ -0.02
PTPRF-214ENST00000496043 PNMA1Q8ND90 353 aa14.94□□□□□ -0.02
PTPRF-214ENST00000496043 VTI1AQ96AJ9 217 aa14.94□□□□□ -0.02
PTPRF-214ENST00000496043 KATNBL1Q9H079 304 aa14.94□□□□□ -0.02
PTPRF-214ENST00000496043 UPF3AQ9H1J1 476 aaKnown RBP14.94□□□□□ -0.02
PTPRF-214ENST00000496043 ADD3Q9UEY8 706 aaKnown RBP14.94□□□□□ -0.02
PTPRF-214ENST00000496043 PLXNA1Q9UIW2 1896 aa14.94□□□□□ -0.02
PTPRF-214ENST00000496043 FRMPD3Q5JV73 1810 aa14.94□□□□□ -0.02
PTPRF-214ENST00000496043 TRIM43BA6NCK2 446 aa14.93□□□□□ -0.02
PTPRF-214ENST00000496043 DCDC2CA8MYV0 355 aa14.93□□□□□ -0.02
PTPRF-214ENST00000496043 SH3RF1Q7Z6J0 888 aa14.93□□□□□ -0.02
PTPRF-214ENST00000496043 TRIM43Q96BQ3 446 aaPredicted RBP14.93□□□□□ -0.02
PTPRF-214ENST00000496043 GLT1D1Q96MS3 346 aa14.93□□□□□ -0.02
PTPRF-214ENST00000496043 TOX2Q96NM4 488 aa14.93□□□□□ -0.02
PTPRF-214ENST00000496043 UBA5Q9GZZ9 404 aa14.93□□□□□ -0.02
PTPRF-214ENST00000496043 AP5M1Q9H0R1 490 aa14.93□□□□□ -0.02
PTPRF-214ENST00000496043 PDLIM7Q9NR12 457 aa14.93□□□□□ -0.02
PTPRF-214ENST00000496043 ELP1O95163 1332 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 LOC102724159A0A0B4J2E5 919 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 PTPDC1A2A3K4 754 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 MYADML2A6NDP7 307 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 PQBP1O60828 265 aaKnown RBP14.92□□□□□ -0.02
PTPRF-214ENST00000496043 ASGR1P07306 291 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 CLTBP09497 229 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 GOLGA8HP0CJ92 632 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 CHMLP26374 656 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 NKX3-2P78367 333 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 PWP2Q15269 919 aaKnown RBP14.92□□□□□ -0.02
PTPRF-214ENST00000496043 RNF207Q6ZRF8 634 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 MORC4Q8TE76 937 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 CLEC4DQ8WXI8 215 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 BADQ92934 168 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 UBAC1Q9BSL1 405 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 TMEM39AQ9NV64 488 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 Q9Y3F1 56 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 WDR19Q8NEZ3 1342 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 RAD50Q92878 1312 aa14.92□□□□□ -0.02
PTPRF-214ENST00000496043 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.91□□□□□ -0.02
PTPRF-214ENST00000496043 NFIBO00712 420 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 DYNC1LI2O43237 492 aaPredicted RBP14.91□□□□□ -0.02
PTPRF-214ENST00000496043 ADCY6O43306 1168 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 ZEB2O60315 1214 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 CALML3P27482 149 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 IRX5P78411 483 aaPredicted RBP14.91□□□□□ -0.02
PTPRF-214ENST00000496043 TRDNQ13061 729 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 ASPRV1Q53RT3 343 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 TAPT1Q6NXT6 567 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 KIAA1211Q6ZU35 1233 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 EEPD1Q7L9B9 569 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 ANKRD33Q7Z3H0 272 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 ENAHQ8N8S7 591 aaPredicted RBP14.91□□□□□ -0.02
PTPRF-214ENST00000496043 RGS22Q8NE09 1264 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 PURBQ96QR8 312 aaKnown RBP14.91□□□□□ -0.02
PTPRF-214ENST00000496043 MPHOSPH6Q99547 160 aaKnown RBP14.91□□□□□ -0.02
PTPRF-214ENST00000496043 IL25Q9H293 177 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 VTA1Q9NP79 307 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 PDGFCQ9NRA1 345 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 GNEQ9Y223 722 aaKnown RBP14.91□□□□□ -0.02
PTPRF-214ENST00000496043 U3KPZ7 1027 aaPredicted RBP14.91□□□□□ -0.02
PTPRF-214ENST00000496043 TNKSO95271 1327 aa14.91□□□□□ -0.02
PTPRF-214ENST00000496043 B4DLN1 442 aa14.9□□□□□ -0.02
PTPRF-214ENST00000496043 KIAA0355O15063 1070 aa14.9□□□□□ -0.02
PTPRF-214ENST00000496043 PARP1P09874 1014 aaKnown RBP14.9□□□□□ -0.02
PTPRF-214ENST00000496043 RAG1P15918 1043 aa14.9□□□□□ -0.02
PTPRF-214ENST00000496043 SMPD1P17405 629 aa14.9□□□□□ -0.02
PTPRF-214ENST00000496043 CDK7P50613 346 aa14.9□□□□□ -0.02
PTPRF-214ENST00000496043 ALDH5A1P51649 535 aaPredicted RBP14.9□□□□□ -0.02
PTPRF-214ENST00000496043 MRPL12P52815 198 aaKnown RBP14.9□□□□□ -0.02
PTPRF-214ENST00000496043 IFIT1BQ5T764 474 aaKnown RBP14.9□□□□□ -0.02
PTPRF-214ENST00000496043 ADGRF4Q8IZF3 695 aa14.9□□□□□ -0.02
PTPRF-214ENST00000496043 MAF1Q9H063 256 aa14.9□□□□□ -0.02
PTPRF-214ENST00000496043 VAT1LQ9HCJ6 419 aa14.9□□□□□ -0.02
PTPRF-214ENST00000496043 ASTN1O14525 1302 aa14.9□□□□□ -0.02
PTPRF-214ENST00000496043 MROH7Q68CQ1 1323 aa14.9□□□□□ -0.02
PTPRF-214ENST00000496043 A0A0U1RQG5 324 aaPredicted RBP14.89□□□□□ -0.03
PTPRF-214ENST00000496043 ARVCFO00192 962 aa14.89□□□□□ -0.03
PTPRF-214ENST00000496043 CTAGE5O15320 804 aa14.89□□□□□ -0.03
PTPRF-214ENST00000496043 CABYRO75952 493 aa14.89□□□□□ -0.03
PTPRF-214ENST00000496043 RPS6P62753 249 aaKnown RBP14.89□□□□□ -0.03
PTPRF-214ENST00000496043 BEX3Q00994 111 aa14.89□□□□□ -0.03
PTPRF-214ENST00000496043 PTH1RQ03431 593 aa14.89□□□□□ -0.03
PTPRF-214ENST00000496043 FAAP100Q0VG06 881 aa14.89□□□□□ -0.03
PTPRF-214ENST00000496043 SHHQ15465 462 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms