RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 KCTD2Q14681 263 aa17.06■□□□□ 0.32
HDAC9-226ENST00000496026 OTOP1Q7RTM1 612 aa17.06■□□□□ 0.32
HDAC9-226ENST00000496026 PHKBQ93100 1093 aa17.06■□□□□ 0.32
HDAC9-226ENST00000496026 SLC26A6Q9BXS9 759 aa17.06■□□□□ 0.32
HDAC9-226ENST00000496026 SH2B1Q9NRF2 756 aaPredicted RBP17.06■□□□□ 0.32
HDAC9-226ENST00000496026 MRPL11Q9Y3B7 192 aaKnown RBP17.06■□□□□ 0.32
HDAC9-226ENST00000496026 SLC15A5A6NIM6 579 aa17.05■□□□□ 0.32
HDAC9-226ENST00000496026 NTRK3Q16288 839 aa17.05■□□□□ 0.32
HDAC9-226ENST00000496026 MUM1L1Q5H9M0 696 aa17.05■□□□□ 0.32
HDAC9-226ENST00000496026 HEATR3Q7Z4Q2 680 aa17.05■□□□□ 0.32
HDAC9-226ENST00000496026 CTU1Q7Z7A3 348 aaKnown RBP17.05■□□□□ 0.32
HDAC9-226ENST00000496026 TRIM22Q8IYM9 498 aa17.05■□□□□ 0.32
HDAC9-226ENST00000496026 ANKRD35Q8N283 1001 aa17.05■□□□□ 0.32
HDAC9-226ENST00000496026 SOCS4Q8WXH5 440 aa17.05■□□□□ 0.32
HDAC9-226ENST00000496026 GTF3C6Q969F1 213 aa17.05■□□□□ 0.32
HDAC9-226ENST00000496026 NUDT12Q9BQG2 462 aa17.05■□□□□ 0.32
HDAC9-226ENST00000496026 RBM27Q9P2N5 1060 aaKnown RBP17.05■□□□□ 0.32
HDAC9-226ENST00000496026 SRRDQ9UH36 339 aa17.05■□□□□ 0.32
HDAC9-226ENST00000496026 PRPF3O43395 683 aaKnown RBP17.04■□□□□ 0.32
HDAC9-226ENST00000496026 CD2BP2O95400 341 aaKnown RBP17.04■□□□□ 0.32
HDAC9-226ENST00000496026 ADORA2AP29274 412 aa17.04■□□□□ 0.32
HDAC9-226ENST00000496026 PRKCZQ05513 592 aa17.04■□□□□ 0.32
HDAC9-226ENST00000496026 NSMFQ6X4W1 530 aa17.04■□□□□ 0.32
HDAC9-226ENST00000496026 ABRAQ8N0Z2 381 aa17.04■□□□□ 0.32
HDAC9-226ENST00000496026 DDX11Q96FC9 970 aa17.04■□□□□ 0.32
HDAC9-226ENST00000496026 GABRQQ9UN88 632 aa17.04■□□□□ 0.32
HDAC9-226ENST00000496026 COL11A1P12107 1806 aaPredicted RBP17.04■□□□□ 0.32
HDAC9-226ENST00000496026 NFIBO00712 420 aa17.03■□□□□ 0.32
HDAC9-226ENST00000496026 PRMT2P55345 433 aa17.03■□□□□ 0.32
HDAC9-226ENST00000496026 GRB14Q14449 540 aa17.03■□□□□ 0.32
HDAC9-226ENST00000496026 MORN1Q5T089 497 aa17.03■□□□□ 0.32
HDAC9-226ENST00000496026 DPP9Q86TI2 863 aa17.03■□□□□ 0.32
HDAC9-226ENST00000496026 MCF2L2Q86YR7 1114 aa17.03■□□□□ 0.32
HDAC9-226ENST00000496026 CCDC83Q8IWF9 413 aa17.03■□□□□ 0.32
HDAC9-226ENST00000496026 RAET1EQ8TD07 263 aa17.03■□□□□ 0.32
HDAC9-226ENST00000496026 CLEC4DQ8WXI8 215 aa17.03■□□□□ 0.32
HDAC9-226ENST00000496026 RNF26Q9BY78 433 aaPredicted RBP17.03■□□□□ 0.32
HDAC9-226ENST00000496026 PFASO15067 1338 aa17.02■□□□□ 0.32
HDAC9-226ENST00000496026 PTPDC1A2A3K4 754 aa17.02■□□□□ 0.32
HDAC9-226ENST00000496026 SCG2P13521 617 aa17.02■□□□□ 0.32
HDAC9-226ENST00000496026 CYP2B6P20813 491 aa17.02■□□□□ 0.32
HDAC9-226ENST00000496026 RGS2P41220 211 aa17.02■□□□□ 0.32
HDAC9-226ENST00000496026 FLT3LGP49771 235 aa17.02■□□□□ 0.32
HDAC9-226ENST00000496026 MAP2K5Q13163 448 aa17.02■□□□□ 0.32
HDAC9-226ENST00000496026 PFKFB3Q16875 520 aaPredicted RBP17.02■□□□□ 0.32
HDAC9-226ENST00000496026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.02■□□□□ 0.32
HDAC9-226ENST00000496026 GPKOWQ92917 476 aaPredicted RBP eCLIP17.02■□□□□ 0.32
HDAC9-226ENST00000496026 TMX3Q96JJ7 454 aa17.02■□□□□ 0.32
HDAC9-226ENST00000496026 A1CFQ9NQ94 594 aaKnown RBP17.02■□□□□ 0.32
HDAC9-226ENST00000496026 SLC5A4Q9NY91 659 aa17.02■□□□□ 0.32
HDAC9-226ENST00000496026 GJD2Q9UKL4 321 aa17.02■□□□□ 0.32
HDAC9-226ENST00000496026 PCNTO95613 3336 aa17.02■□□□□ 0.31
HDAC9-226ENST00000496026 hCG_1984214I3L0E3 225 aa17.01■□□□□ 0.31
HDAC9-226ENST00000496026 PGK2P07205 417 aa17.01■□□□□ 0.31
HDAC9-226ENST00000496026 NAPAP54920 295 aa17.01■□□□□ 0.31
HDAC9-226ENST00000496026 PKN2Q16513 984 aaKnown RBP17.01■□□□□ 0.31
HDAC9-226ENST00000496026 WWC2Q6AWC2 1192 aa17.01■□□□□ 0.31
HDAC9-226ENST00000496026 RNF207Q6ZRF8 634 aa17.01■□□□□ 0.31
HDAC9-226ENST00000496026 ZNF713Q8N859 430 aaPredicted RBP17.01■□□□□ 0.31
HDAC9-226ENST00000496026 DTNBO60941 627 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 DEXIO95424 95 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 CTDNEP1O95476 244 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 CFBP00751 764 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 CALML3P27482 149 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 ST3GAL1Q11201 340 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 BAATQ14032 418 aaPredicted RBP17■□□□□ 0.31
HDAC9-226ENST00000496026 PKN1Q16512 942 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 RGS22Q8NE09 1264 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 NSUN7Q8NE18 718 aaKnown RBP17■□□□□ 0.31
HDAC9-226ENST00000496026 USP6NLQ92738 828 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 APBA2Q99767 749 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 BARHL2Q9NY43 387 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 CYP39A1Q9NYL5 469 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 ORC3Q9UBD5 711 aaPredicted RBP17■□□□□ 0.31
HDAC9-226ENST00000496026 PTPN22Q9Y2R2 807 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 PTCH2Q9Y6C5 1203 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 ZSWIM8A7E2V4 1837 aa17■□□□□ 0.31
HDAC9-226ENST00000496026 STK36Q9NRP7 1315 aa16.99■□□□□ 0.31
HDAC9-226ENST00000496026 POTEB2H3BUK9 544 aa16.99■□□□□ 0.31
HDAC9-226ENST00000496026 STXBP3O00186 592 aa16.99■□□□□ 0.31
HDAC9-226ENST00000496026 COBLO75128 1261 aa16.99■□□□□ 0.31
HDAC9-226ENST00000496026 IRF5Q13568 498 aa16.99■□□□□ 0.31
HDAC9-226ENST00000496026 PPP1R18Q6NYC8 613 aa16.99■□□□□ 0.31
HDAC9-226ENST00000496026 CCDC12Q8WUD4 166 aaPredicted RBP16.99■□□□□ 0.31
HDAC9-226ENST00000496026 LLPHQ9BRT6 129 aaKnown RBP16.99■□□□□ 0.31
HDAC9-226ENST00000496026 CASP8AP2Q9UKL3 1982 aa16.98■□□□□ 0.31
HDAC9-226ENST00000496026 DNAJC25-GNG10A0A024R161 153 aa16.98■□□□□ 0.31
HDAC9-226ENST00000496026 GCOM1H8Y6P7 765 aaPredicted RBP16.98■□□□□ 0.31
HDAC9-226ENST00000496026 JAK2O60674 1132 aa16.98■□□□□ 0.31
HDAC9-226ENST00000496026 POLR2MP0CAP2 368 aa16.98■□□□□ 0.31
HDAC9-226ENST00000496026 XRCC5P13010 732 aaKnown RBP16.98■□□□□ 0.31
HDAC9-226ENST00000496026 RPS6P62753 249 aaKnown RBP16.98■□□□□ 0.31
HDAC9-226ENST00000496026 FBXO46Q6PJ61 603 aaPredicted RBP16.98■□□□□ 0.31
HDAC9-226ENST00000496026 SLC30A10Q6XR72 485 aa16.98■□□□□ 0.31
HDAC9-226ENST00000496026 HSCBQ8IWL3 235 aa16.98■□□□□ 0.31
HDAC9-226ENST00000496026 SAMD3Q8N6K7 520 aa16.98■□□□□ 0.31
HDAC9-226ENST00000496026 NPLOC4Q8TAT6 608 aa16.98■□□□□ 0.31
HDAC9-226ENST00000496026 WASF1Q92558 559 aa16.98■□□□□ 0.31
HDAC9-226ENST00000496026 TBC1D5Q92609 795 aa16.98■□□□□ 0.31
HDAC9-226ENST00000496026 CUL5Q93034 780 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms