RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 TLR7Q9NYK1 1049 aaKnown RBP15.92■□□□□ 0.14
TFE3-205ENST00000495940 FAM184BQ9ULE4 1060 aa15.92■□□□□ 0.14
TFE3-205ENST00000495940 DIS3Q9Y2L1 958 aaKnown RBP15.92■□□□□ 0.14
TFE3-205ENST00000495940 FPGT-TNNI3KV9GXZ4 949 aa15.92■□□□□ 0.14
TFE3-205ENST00000495940 PTPRSQ13332 1948 aa15.92■□□□□ 0.14
TFE3-205ENST00000495940 RAD50Q92878 1312 aa15.92■□□□□ 0.14
TFE3-205ENST00000495940 TLR3O15455 904 aaKnown RBP15.91■□□□□ 0.14
TFE3-205ENST00000495940 SGSM2O43147 1006 aa15.91■□□□□ 0.14
TFE3-205ENST00000495940 DUSP11O75319 330 aaKnown RBP15.91■□□□□ 0.14
TFE3-205ENST00000495940 G3BP1Q13283 466 aaKnown RBP eCLIP15.91■□□□□ 0.14
TFE3-205ENST00000495940 CCDC158Q5M9N0 1113 aa15.91■□□□□ 0.14
TFE3-205ENST00000495940 MCTP1Q6DN14 999 aa15.91■□□□□ 0.14
TFE3-205ENST00000495940 WNT8AQ9H1J5 351 aa15.91■□□□□ 0.14
TFE3-205ENST00000495940 HIPK3Q9H422 1215 aa15.91■□□□□ 0.14
TFE3-205ENST00000495940 ZBBXA8MT70 800 aa15.9■□□□□ 0.14
TFE3-205ENST00000495940 ARHGEF15O94989 841 aa15.9■□□□□ 0.14
TFE3-205ENST00000495940 LETM1O95202 739 aaPredicted RBP15.9■□□□□ 0.14
TFE3-205ENST00000495940 POLR3DP05423 398 aaPredicted RBP15.9■□□□□ 0.14
TFE3-205ENST00000495940 CA3P07451 260 aa15.9■□□□□ 0.14
TFE3-205ENST00000495940 CYP2D6P10635 497 aa15.9■□□□□ 0.14
TFE3-205ENST00000495940 NASPP49321 788 aaPredicted RBP15.9■□□□□ 0.14
TFE3-205ENST00000495940 SIAH1Q8IUQ4 282 aa15.9■□□□□ 0.14
TFE3-205ENST00000495940 VWCEQ96DN2 955 aa15.9■□□□□ 0.14
TFE3-205ENST00000495940 ZSCAN31Q96LW9 406 aaPredicted RBP15.9■□□□□ 0.14
TFE3-205ENST00000495940 UPF3AQ9H1J1 476 aaKnown RBP15.9■□□□□ 0.14
TFE3-205ENST00000495940 VCPKMTQ9H867 229 aa15.9■□□□□ 0.14
TFE3-205ENST00000495940 ZNF214Q9UL59 606 aaPredicted RBP15.9■□□□□ 0.14
TFE3-205ENST00000495940 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.9■□□□□ 0.14
TFE3-205ENST00000495940 PCDHA11Q9Y5I1 949 aa15.9■□□□□ 0.14
TFE3-205ENST00000495940 SLC4A7Q9Y6M7 1214 aa15.9■□□□□ 0.14
TFE3-205ENST00000495940 TANC1Q9C0D5 1861 aa15.89■□□□□ 0.13
TFE3-205ENST00000495940 WDR46O15213 610 aaKnown RBP15.89■□□□□ 0.13
TFE3-205ENST00000495940 CTAGE5O15320 804 aa15.89■□□□□ 0.13
TFE3-205ENST00000495940 GTPBP6O43824 516 aaPredicted RBP15.89■□□□□ 0.13
TFE3-205ENST00000495940 BEX3Q00994 111 aa15.89■□□□□ 0.13
TFE3-205ENST00000495940 ICA1Q05084 483 aa15.89■□□□□ 0.13
TFE3-205ENST00000495940 TMEM179Q6ZVK1 233 aa15.89■□□□□ 0.13
TFE3-205ENST00000495940 PCSK9Q8NBP7 692 aaKnown RBP15.89■□□□□ 0.13
TFE3-205ENST00000495940 REPS2Q8NFH8 660 aa15.89■□□□□ 0.13
TFE3-205ENST00000495940 PI4K2BQ8TCG2 481 aa15.89■□□□□ 0.13
TFE3-205ENST00000495940 KCNB2Q92953 911 aa15.89■□□□□ 0.13
TFE3-205ENST00000495940 RIOK1Q9BRS2 568 aaKnown RBP15.89■□□□□ 0.13
TFE3-205ENST00000495940 RTN4Q9NQC3 1192 aaKnown RBP15.89■□□□□ 0.13
TFE3-205ENST00000495940 BRWD1Q9NSI6 2320 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 ESPNB1AK53 854 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 AKR1B1P15121 316 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 ATP2A2P16615 1042 aaKnown RBP15.88■□□□□ 0.13
TFE3-205ENST00000495940 MCM5P33992 734 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 STAT3P40763 770 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 GNASQ5JWF2 1037 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 SPRED2Q7Z698 418 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 EVI5LQ96CN4 794 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 DYNLL2Q96FJ2 89 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 SCLYQ96I15 445 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 NOC4LQ9BVI4 516 aaKnown RBP15.88■□□□□ 0.13
TFE3-205ENST00000495940 ARHGEF10LQ9HCE6 1279 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 SH2B1Q9NRF2 756 aaPredicted RBP15.88■□□□□ 0.13
TFE3-205ENST00000495940 ECHDC1Q9NTX5 307 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 FOXD4L1Q9NU39 408 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 DBNLQ9UJU6 430 aaKnown RBP15.88■□□□□ 0.13
TFE3-205ENST00000495940 ADAMTS5Q9UNA0 930 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 COG5Q9UP83 839 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 TMX2Q9Y320 296 aa15.88■□□□□ 0.13
TFE3-205ENST00000495940 SMIM22K7EJ46 135 aa15.87■□□□□ 0.13
TFE3-205ENST00000495940 VWA5AO00534 786 aa15.87■□□□□ 0.13
TFE3-205ENST00000495940 PTGS1P23219 599 aa15.87■□□□□ 0.13
TFE3-205ENST00000495940 GJA9P57773 515 aa15.87■□□□□ 0.13
TFE3-205ENST00000495940 ACVR2BQ13705 512 aa15.87■□□□□ 0.13
TFE3-205ENST00000495940 CCDC144BQ3MJ40 725 aa15.87■□□□□ 0.13
TFE3-205ENST00000495940 CERS3Q8IU89 383 aa15.87■□□□□ 0.13
TFE3-205ENST00000495940 TMEM87AQ8NBN3 555 aa15.87■□□□□ 0.13
TFE3-205ENST00000495940 ZNF512BQ96KM6 892 aaPredicted RBP15.87■□□□□ 0.13
TFE3-205ENST00000495940 FGD4Q96M96 766 aa15.87■□□□□ 0.13
TFE3-205ENST00000495940 MCM9Q9NXL9 1143 aa15.87■□□□□ 0.13
TFE3-205ENST00000495940 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.87■□□□□ 0.13
TFE3-205ENST00000495940 PPP1R9AQ9ULJ8 1098 aa15.87■□□□□ 0.13
TFE3-205ENST00000495940 DNAJC25-GNG10A0A024R161 153 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 PI4K2BG5E9Z4 385 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 POU3F3P20264 500 aaPredicted RBP15.86■□□□□ 0.13
TFE3-205ENST00000495940 OS9Q13438 667 aaPredicted RBP15.86■□□□□ 0.13
TFE3-205ENST00000495940 TTLL4Q14679 1199 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 ZSCAN23Q3MJ62 389 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 CXCL17Q6UXB2 119 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 MAMDC4Q6UXC1 1216 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 MSL3Q8N5Y2 521 aaKnown RBP15.86■□□□□ 0.13
TFE3-205ENST00000495940 FAM184AQ8NB25 1140 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 SDR42E1Q8WUS8 393 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 ARNTL2Q8WYA1 636 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 HLA-CQ95604 372 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 TRPV6Q9H1D0 765 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 SPC25Q9HBM1 224 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 GPR108Q9NPR9 543 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 DIAPH3Q9NSV4 1193 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 LIMCH1Q9UPQ0 1083 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 RIPK3Q9Y572 518 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 ASTN1O14525 1302 aa15.86■□□□□ 0.13
TFE3-205ENST00000495940 GREB1LQ9C091 1923 aaPredicted RBP15.86■□□□□ 0.13
TFE3-205ENST00000495940 B4GALT4O60513 344 aa15.85■□□□□ 0.13
TFE3-205ENST00000495940 IFIT2P09913 472 aaKnown RBP15.85■□□□□ 0.13
TFE3-205ENST00000495940 TMEM67Q5HYA8 995 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms