RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 AGBL1Q96MI9 1066 aa20.87■□□□□ 0.93
TMEM53-209ENST00000495630 HIPK3Q9H422 1215 aa20.87■□□□□ 0.93
TMEM53-209ENST00000495630 RNF146Q9NTX7 359 aa20.87■□□□□ 0.93
TMEM53-209ENST00000495630 ZNF536O15090 1300 aa20.86■□□□□ 0.93
TMEM53-209ENST00000495630 M0R2C6 588 aa20.86■□□□□ 0.93
TMEM53-209ENST00000495630 DYNC1LI2O43237 492 aaPredicted RBP20.86■□□□□ 0.93
TMEM53-209ENST00000495630 FSCN1Q16658 493 aaKnown RBP20.86■□□□□ 0.93
TMEM53-209ENST00000495630 TRERF1Q96PN7 1200 aa20.86■□□□□ 0.93
TMEM53-209ENST00000495630 ASB2Q96Q27 587 aa20.86■□□□□ 0.93
TMEM53-209ENST00000495630 DCTPP1Q9H773 170 aa20.86■□□□□ 0.93
TMEM53-209ENST00000495630 PLIN4Q96Q06 1357 aa20.85■□□□□ 0.93
TMEM53-209ENST00000495630 MYH7P12883 1935 aa20.85■□□□□ 0.93
TMEM53-209ENST00000495630 SLC1A4P43007 532 aa20.85■□□□□ 0.93
TMEM53-209ENST00000495630 IKQ13123 557 aaPredicted RBP20.85■□□□□ 0.93
TMEM53-209ENST00000495630 RCSD1Q6JBY9 416 aa20.85■□□□□ 0.93
TMEM53-209ENST00000495630 TLK2Q86UE8 772 aa20.85■□□□□ 0.93
TMEM53-209ENST00000495630 RPUSD2Q8IZ73 545 aaKnown RBP20.85■□□□□ 0.93
TMEM53-209ENST00000495630 SLC28A3Q9HAS3 691 aa20.85■□□□□ 0.93
TMEM53-209ENST00000495630 CXXC1Q9P0U4 656 aaPredicted RBP20.85■□□□□ 0.93
TMEM53-209ENST00000495630 RCAN3Q9UKA8 241 aa20.85■□□□□ 0.93
TMEM53-209ENST00000495630 ISY1Q9ULR0 285 aaKnown RBP20.85■□□□□ 0.93
TMEM53-209ENST00000495630 GRIN2DO15399 1336 aa20.84■□□□□ 0.93
TMEM53-209ENST00000495630 ALAS1P13196 640 aa20.84■□□□□ 0.93
TMEM53-209ENST00000495630 SMPD1P17405 629 aa20.84■□□□□ 0.93
TMEM53-209ENST00000495630 MCCP23508 829 aa20.84■□□□□ 0.93
TMEM53-209ENST00000495630 MRPS5P82675 430 aaKnown RBP20.84■□□□□ 0.93
TMEM53-209ENST00000495630 ADGRE1Q14246 886 aa20.84■□□□□ 0.93
TMEM53-209ENST00000495630 THEGQ9P2T0 379 aa20.84■□□□□ 0.93
TMEM53-209ENST00000495630 IGFBP4P22692 258 aa20.83■□□□□ 0.93
TMEM53-209ENST00000495630 TAPT1Q6NXT6 567 aa20.83■□□□□ 0.93
TMEM53-209ENST00000495630 OTOP2Q7RTS6 562 aa20.83■□□□□ 0.93
TMEM53-209ENST00000495630 NOC4LQ9BVI4 516 aaKnown RBP20.83■□□□□ 0.93
TMEM53-209ENST00000495630 NAPBQ9H115 298 aa20.83■□□□□ 0.93
TMEM53-209ENST00000495630 CYP39A1Q9NYL5 469 aa20.83■□□□□ 0.93
TMEM53-209ENST00000495630 MYO9BQ13459 2157 aa20.82■□□□□ 0.92
TMEM53-209ENST00000495630 CCL23P55773 120 aa20.82■□□□□ 0.92
TMEM53-209ENST00000495630 PPARAQ07869 468 aa20.82■□□□□ 0.92
TMEM53-209ENST00000495630 TSHZ3Q63HK5 1081 aa20.82■□□□□ 0.92
TMEM53-209ENST00000495630 TRPV6Q9H1D0 765 aa20.82■□□□□ 0.92
TMEM53-209ENST00000495630 NKX2-4Q9H2Z4 354 aa20.82■□□□□ 0.92
TMEM53-209ENST00000495630 PDGFCQ9NRA1 345 aa20.82■□□□□ 0.92
TMEM53-209ENST00000495630 UMODL1Q5DID0 1318 aa20.81■□□□□ 0.92
TMEM53-209ENST00000495630 B4GALT4O60513 344 aa20.81■□□□□ 0.92
TMEM53-209ENST00000495630 CCDC85BQ15834 202 aaPredicted RBP20.81■□□□□ 0.92
TMEM53-209ENST00000495630 MORC4Q8TE76 937 aa20.81■□□□□ 0.92
TMEM53-209ENST00000495630 SEC62Q99442 399 aaKnown RBP20.81■□□□□ 0.92
TMEM53-209ENST00000495630 VTA1Q9NP79 307 aa20.81■□□□□ 0.92
TMEM53-209ENST00000495630 PRR12Q9ULL5 1215 aa20.81■□□□□ 0.92
TMEM53-209ENST00000495630 YBX2Q9Y2T7 364 aaKnown RBP20.81■□□□□ 0.92
TMEM53-209ENST00000495630 SLC4A7Q9Y6M7 1214 aa20.81■□□□□ 0.92
TMEM53-209ENST00000495630 MCM3APO60318 1980 aa20.81■□□□□ 0.92
TMEM53-209ENST00000495630 ERC2O15083 957 aa20.8■□□□□ 0.92
TMEM53-209ENST00000495630 COL9A1P20849 921 aa20.8■□□□□ 0.92
TMEM53-209ENST00000495630 MUM1L1Q5H9M0 696 aa20.8■□□□□ 0.92
TMEM53-209ENST00000495630 C20orf194Q5TEA3 1177 aa20.8■□□□□ 0.92
TMEM53-209ENST00000495630 KIAA1211Q6ZU35 1233 aa20.8■□□□□ 0.92
TMEM53-209ENST00000495630 KCTD1Q719H9 257 aa20.8■□□□□ 0.92
TMEM53-209ENST00000495630 EEPD1Q7L9B9 569 aa20.8■□□□□ 0.92
TMEM53-209ENST00000495630 TSPYL2Q9H2G4 693 aaPredicted RBP20.8■□□□□ 0.92
TMEM53-209ENST00000495630 STX8Q9UNK0 236 aa20.8■□□□□ 0.92
TMEM53-209ENST00000495630 TTC41PQ6P2S7 1318 aa20.79■□□□□ 0.92
TMEM53-209ENST00000495630 MUC3AQ02505 3323 aa20.79■□□□□ 0.92
TMEM53-209ENST00000495630 MYH4Q9Y623 1939 aa20.79■□□□□ 0.92
TMEM53-209ENST00000495630 TSPY2A6NKD2 308 aa20.79■□□□□ 0.92
TMEM53-209ENST00000495630 SUPT20HL2P0C7V6 817 aa20.79■□□□□ 0.92
TMEM53-209ENST00000495630 ZMYM1Q5SVZ6 1142 aa20.79■□□□□ 0.92
TMEM53-209ENST00000495630 FBXO16Q8IX29 292 aaPredicted RBP20.79■□□□□ 0.92
TMEM53-209ENST00000495630 ADAMTS19Q8TE59 1207 aa20.79■□□□□ 0.92
TMEM53-209ENST00000495630 CHMP4CQ96CF2 233 aa20.79■□□□□ 0.92
TMEM53-209ENST00000495630 WNT8AQ9H1J5 351 aa20.79■□□□□ 0.92
TMEM53-209ENST00000495630 IL17RBQ9NRM6 502 aa20.79■□□□□ 0.92
TMEM53-209ENST00000495630 PCDHA11Q9Y5I1 949 aa20.79■□□□□ 0.92
TMEM53-209ENST00000495630 LOC102724159A0A0B4J2E5 919 aa20.78■□□□□ 0.92
TMEM53-209ENST00000495630 ICAM1P05362 532 aa20.78■□□□□ 0.92
TMEM53-209ENST00000495630 PFKMP08237 780 aa20.78■□□□□ 0.92
TMEM53-209ENST00000495630 PTGS1P23219 599 aa20.78■□□□□ 0.92
TMEM53-209ENST00000495630 SNAP25P60880 206 aa20.78■□□□□ 0.92
TMEM53-209ENST00000495630 PSMC6P62333 389 aa20.78■□□□□ 0.92
TMEM53-209ENST00000495630 PWP2Q15269 919 aaKnown RBP20.78■□□□□ 0.92
TMEM53-209ENST00000495630 DUSP28Q4G0W2 176 aa20.78■□□□□ 0.92
TMEM53-209ENST00000495630 NSMFQ6X4W1 530 aa20.78■□□□□ 0.92
TMEM53-209ENST00000495630 ALDH8A1Q9H2A2 487 aaPredicted RBP20.78■□□□□ 0.92
TMEM53-209ENST00000495630 POLR3EQ9NVU0 708 aa20.78■□□□□ 0.92
TMEM53-209ENST00000495630 ADD3Q9UEY8 706 aaKnown RBP20.78■□□□□ 0.92
TMEM53-209ENST00000495630 CCPG1Q9ULG6 757 aa20.78■□□□□ 0.92
TMEM53-209ENST00000495630 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.78■□□□□ 0.92
TMEM53-209ENST00000495630 CHD9Q3L8U1 2897 aa20.78■□□□□ 0.92
TMEM53-209ENST00000495630 NOVP48745 357 aa20.77■□□□□ 0.92
TMEM53-209ENST00000495630 RABGGTBP53611 331 aa20.77■□□□□ 0.92
TMEM53-209ENST00000495630 TMEM63BQ5T3F8 832 aa20.77■□□□□ 0.92
TMEM53-209ENST00000495630 IL27Q8NEV9 243 aa20.77■□□□□ 0.92
TMEM53-209ENST00000495630 VWCEQ96DN2 955 aa20.77■□□□□ 0.92
TMEM53-209ENST00000495630 DDX49Q9Y6V7 483 aaKnown RBP20.77■□□□□ 0.92
TMEM53-209ENST00000495630 BAATQ14032 418 aaPredicted RBP20.76■□□□□ 0.91
TMEM53-209ENST00000495630 DIEXFQ68CQ4 756 aaKnown RBP20.76■□□□□ 0.91
TMEM53-209ENST00000495630 PI4K2BQ8TCG2 481 aa20.76■□□□□ 0.91
TMEM53-209ENST00000495630 DCAF4Q8WV16 495 aa20.76■□□□□ 0.91
TMEM53-209ENST00000495630 SCLYQ96I15 445 aa20.76■□□□□ 0.91
TMEM53-209ENST00000495630 UHRF1Q96T88 793 aaPredicted RBP20.76■□□□□ 0.91
TMEM53-209ENST00000495630 FSD1Q9BTV5 496 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms