RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 SRRDQ9UH36 339 aa12.78□□□□□ -0.36
KDM1A-205ENST00000494920 NAP1L2Q9ULW6 460 aaPredicted RBP12.78□□□□□ -0.36
KDM1A-205ENST00000494920 ABCB11O95342 1321 aa12.78□□□□□ -0.36
KDM1A-205ENST00000494920 hCG_1642624A0A1W2PR95 340 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 SLC15A5A6NIM6 579 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 NFIBO00712 420 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 TNPO2O14787 897 aaKnown RBP12.77□□□□□ -0.37
KDM1A-205ENST00000494920 PRPF3O43395 683 aaKnown RBP12.77□□□□□ -0.37
KDM1A-205ENST00000494920 ALAS1P13196 640 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 PRKCZQ05513 592 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 WWC2Q6AWC2 1192 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 NCAPG2Q86XI2 1143 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 CCDC82Q8N4S0 544 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 NSUN7Q8NE18 718 aaKnown RBP12.77□□□□□ -0.37
KDM1A-205ENST00000494920 PHKBQ93100 1093 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 RRP36Q96EU6 259 aaKnown RBP12.77□□□□□ -0.37
KDM1A-205ENST00000494920 ZSCAN31Q96LW9 406 aaPredicted RBP12.77□□□□□ -0.37
KDM1A-205ENST00000494920 TRERF1Q96PN7 1200 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 AMNQ9BXJ7 453 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 ACAD9Q9H845 621 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 A1CFQ9NQ94 594 aaKnown RBP12.77□□□□□ -0.37
KDM1A-205ENST00000494920 SH2B1Q9NRF2 756 aaPredicted RBP12.77□□□□□ -0.37
KDM1A-205ENST00000494920 FBXO40Q9UH90 709 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 GABRQQ9UN88 632 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 STK36Q9NRP7 1315 aa12.77□□□□□ -0.37
KDM1A-205ENST00000494920 KIAA0100Q14667 2235 aaKnown RBP12.77□□□□□ -0.37
KDM1A-205ENST00000494920 STRNO43815 780 aa12.76□□□□□ -0.37
KDM1A-205ENST00000494920 DHX16O60231 1041 aaKnown RBP12.76□□□□□ -0.37
KDM1A-205ENST00000494920 COBLO75128 1261 aa12.76□□□□□ -0.37
KDM1A-205ENST00000494920 FMNL1O95466 1100 aaPredicted RBP12.76□□□□□ -0.37
KDM1A-205ENST00000494920 FDPSP14324 419 aaKnown RBP12.76□□□□□ -0.37
KDM1A-205ENST00000494920 MCM2P49736 904 aa12.76□□□□□ -0.37
KDM1A-205ENST00000494920 IRF5Q13568 498 aa12.76□□□□□ -0.37
KDM1A-205ENST00000494920 PFKFB3Q16875 520 aaPredicted RBP12.76□□□□□ -0.37
KDM1A-205ENST00000494920 USH1GQ495M9 461 aa12.76□□□□□ -0.37
KDM1A-205ENST00000494920 CTU1Q7Z7A3 348 aaKnown RBP12.76□□□□□ -0.37
KDM1A-205ENST00000494920 RGS22Q8NE09 1264 aa12.76□□□□□ -0.37
KDM1A-205ENST00000494920 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
KDM1A-205ENST00000494920 SOCS4Q8WXH5 440 aa12.76□□□□□ -0.37
KDM1A-205ENST00000494920 SNX21Q969T3 373 aa12.76□□□□□ -0.37
KDM1A-205ENST00000494920 TMX3Q96JJ7 454 aa12.76□□□□□ -0.37
KDM1A-205ENST00000494920 MAF1Q9H063 256 aa12.76□□□□□ -0.37
KDM1A-205ENST00000494920 HOMER2Q9NSB8 354 aa12.76□□□□□ -0.37
KDM1A-205ENST00000494920 CTDP1Q9Y5B0 961 aaPredicted RBP12.76□□□□□ -0.37
KDM1A-205ENST00000494920 V9GY48 417 aaPredicted RBP12.76□□□□□ -0.37
KDM1A-205ENST00000494920 ASTN1O14525 1302 aa12.76□□□□□ -0.37
KDM1A-205ENST00000494920 MKI67P46013 3256 aaKnown RBP12.75□□□□□ -0.37
KDM1A-205ENST00000494920 STXBP3O00186 592 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 PPFIA3O75145 1194 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 ADORA2AP29274 412 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 FLT3LGP49771 235 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 MAP2K5Q13163 448 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 KIF22Q14807 665 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 FAM133AQ8N9E0 248 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 PIBF1Q8WXW3 757 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 TBC1D5Q92609 795 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 GPKOWQ92917 476 aaPredicted RBP eCLIP12.75□□□□□ -0.371e-7■□□□□ 9.2
KDM1A-205ENST00000494920 COA7Q96BR5 231 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 SLC26A6Q9BXS9 759 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 BARHL2Q9NY43 387 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 CYP39A1Q9NYL5 469 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 RBM27Q9P2N5 1060 aaKnown RBP12.75□□□□□ -0.37
KDM1A-205ENST00000494920 TRIM17Q9Y577 477 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 PCDHA1Q9Y5I3 950 aa12.75□□□□□ -0.37
KDM1A-205ENST00000494920 PFASO15067 1338 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 hCG_1984214I3L0E3 225 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 JAK2O60674 1132 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 DTNBO60941 627 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 ECM2O94769 699 aaPredicted RBP12.74□□□□□ -0.37
KDM1A-205ENST00000494920 FCER1AP12319 257 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 XRCC5P13010 732 aaKnown RBP12.74□□□□□ -0.37
KDM1A-205ENST00000494920 SCG2P13521 617 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 HSD17B4P51659 736 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 PRMT2P55345 433 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 CUL4AQ13619 759 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 ZNF792Q3KQV3 632 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 PPP1R18Q6NYC8 613 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 SLC30A10Q6XR72 485 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 CCDC83Q8IWF9 413 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 ZNF713Q8N859 430 aaPredicted RBP12.74□□□□□ -0.37
KDM1A-205ENST00000494920 NPLOC4Q8TAT6 608 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 AIFM3Q96NN9 605 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 MMP19Q99542 508 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 NUDT12Q9BQG2 462 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 COL20A1Q9P218 1284 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 SEC63Q9UGP8 760 aaKnown RBP12.74□□□□□ -0.37
KDM1A-205ENST00000494920 PTPN22Q9Y2R2 807 aa12.74□□□□□ -0.37
KDM1A-205ENST00000494920 MRPL11Q9Y3B7 192 aaKnown RBP12.74□□□□□ -0.37
KDM1A-205ENST00000494920 FRMPD4Q14CM0 1322 aa12.73□□□□□ -0.37
KDM1A-205ENST00000494920 ESYT2A0FGR8 921 aa12.73□□□□□ -0.37
KDM1A-205ENST00000494920 PTPDC1A2A3K4 754 aa12.73□□□□□ -0.37
KDM1A-205ENST00000494920 CPLX1O14810 134 aa12.73□□□□□ -0.37
KDM1A-205ENST00000494920 CDKL5O76039 1030 aa12.73□□□□□ -0.37
KDM1A-205ENST00000494920 DEXIO95424 95 aa12.73□□□□□ -0.37
KDM1A-205ENST00000494920 KCNA4P22459 653 aa12.73□□□□□ -0.37
KDM1A-205ENST00000494920 RPS6P62753 249 aaKnown RBP12.73□□□□□ -0.37
KDM1A-205ENST00000494920 TRAF1Q13077 416 aa12.73□□□□□ -0.37
KDM1A-205ENST00000494920 ARHGEF6Q15052 776 aa12.73□□□□□ -0.37
KDM1A-205ENST00000494920 NPY5RQ15761 445 aa12.73□□□□□ -0.37
KDM1A-205ENST00000494920 WDR78Q5VTH9 848 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms