RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 CTCFLQ8NI51 663 aaPredicted RBP27.27■■□□□ 1.96
CLIC3-203ENST00000494426 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.27■■□□□ 1.96
CLIC3-203ENST00000494426 ZSWIM6Q9HCJ5 1215 aa27.27■■□□□ 1.96
CLIC3-203ENST00000494426 LCTP09848 1927 aa27.27■■□□□ 1.96
CLIC3-203ENST00000494426 BAZ2BQ9UIF8 2168 aaKnown RBP27.26■■□□□ 1.96
CLIC3-203ENST00000494426 NFIBO00712 420 aa27.26■■□□□ 1.95
CLIC3-203ENST00000494426 CALM1P0DP23 149 aa27.26■■□□□ 1.95
CLIC3-203ENST00000494426 CALM2P0DP24 149 aa27.26■■□□□ 1.95
CLIC3-203ENST00000494426 CALM3P0DP25 149 aa27.26■■□□□ 1.95
CLIC3-203ENST00000494426 CCND3P30281 292 aaPredicted RBP27.26■■□□□ 1.95
CLIC3-203ENST00000494426 USH1GQ495M9 461 aa27.26■■□□□ 1.95
CLIC3-203ENST00000494426 APOA5Q6Q788 366 aa27.26■■□□□ 1.95
CLIC3-203ENST00000494426 CCDC144CPQ8IYA2 1237 aa27.26■■□□□ 1.95
CLIC3-203ENST00000494426 TRPV1Q8NER1 839 aa27.26■■□□□ 1.95
CLIC3-203ENST00000494426 HMX1Q9NP08 348 aaPredicted RBP27.26■■□□□ 1.95
CLIC3-203ENST00000494426 CYP39A1Q9NYL5 469 aa27.26■■□□□ 1.95
CLIC3-203ENST00000494426 GTF3C3Q9Y5Q9 886 aa27.26■■□□□ 1.95
CLIC3-203ENST00000494426 PPP1R11O60927 126 aaPredicted RBP27.25■■□□□ 1.95
CLIC3-203ENST00000494426 CNTN2Q02246 1040 aa27.25■■□□□ 1.95
CLIC3-203ENST00000494426 FBXL16Q8N461 479 aa27.25■■□□□ 1.95
CLIC3-203ENST00000494426 FAM133AQ8N9E0 248 aa27.25■■□□□ 1.95
CLIC3-203ENST00000494426 FANCBQ8NB91 859 aa27.25■■□□□ 1.95
CLIC3-203ENST00000494426 PIGSQ96S52 555 aa27.25■■□□□ 1.95
CLIC3-203ENST00000494426 AGXT2Q9BYV1 514 aa27.25■■□□□ 1.95
CLIC3-203ENST00000494426 TM6SF1Q9BZW5 370 aa27.25■■□□□ 1.95
CLIC3-203ENST00000494426 KIAA0100Q14667 2235 aaKnown RBP27.25■■□□□ 1.95
CLIC3-203ENST00000494426 BRCA2P51587 3418 aa27.25■■□□□ 1.95
CLIC3-203ENST00000494426 ZBTB5O15062 677 aa27.24■■□□□ 1.95
CLIC3-203ENST00000494426 PLEKHA8P1O95397 391 aa27.24■■□□□ 1.95
CLIC3-203ENST00000494426 KIF5BP33176 963 aa27.24■■□□□ 1.95
CLIC3-203ENST00000494426 GJA8P48165 433 aa27.24■■□□□ 1.95
CLIC3-203ENST00000494426 NSMFQ6X4W1 530 aa27.24■■□□□ 1.95
CLIC3-203ENST00000494426 RUFY3Q7L099 469 aa27.24■■□□□ 1.95
CLIC3-203ENST00000494426 FBXO11Q86XK2 927 aa27.24■■□□□ 1.95
CLIC3-203ENST00000494426 SRBD1Q8N5C6 995 aaKnown RBP27.24■■□□□ 1.95
CLIC3-203ENST00000494426 SHISA4Q96DD7 197 aa27.24■■□□□ 1.95
CLIC3-203ENST00000494426 TINF2Q9BSI4 451 aa27.24■■□□□ 1.95
CLIC3-203ENST00000494426 PFASO15067 1338 aa27.23■■□□□ 1.95
CLIC3-203ENST00000494426 SOWAHBA6NEL2 793 aa27.23■■□□□ 1.95
CLIC3-203ENST00000494426 POTEB2H3BUK9 544 aa27.23■■□□□ 1.95
CLIC3-203ENST00000494426 SMARCA1P28370 1054 aa27.23■■□□□ 1.95
CLIC3-203ENST00000494426 PRAMEF19Q5SWL8 479 aa27.23■■□□□ 1.95
CLIC3-203ENST00000494426 ZNF467Q7Z7K2 595 aaPredicted RBP27.23■■□□□ 1.95
CLIC3-203ENST00000494426 MICU3Q86XE3 530 aa27.23■■□□□ 1.95
CLIC3-203ENST00000494426 CMTR1Q8N1G2 835 aaKnown RBP27.23■■□□□ 1.95
CLIC3-203ENST00000494426 DEFB118Q96PH6 123 aa27.23■■□□□ 1.95
CLIC3-203ENST00000494426 SPZ1Q9BXG8 430 aa27.23■■□□□ 1.95
CLIC3-203ENST00000494426 ABCB11O95342 1321 aa27.22■■□□□ 1.95
CLIC3-203ENST00000494426 KLF18A0A0U1RQI7 1052 aa27.22■■□□□ 1.95
CLIC3-203ENST00000494426 SGPL1O95470 568 aa27.22■■□□□ 1.95
CLIC3-203ENST00000494426 CYBAP13498 195 aa27.22■■□□□ 1.95
CLIC3-203ENST00000494426 APOBRQ0VD83 1088 aa27.22■■□□□ 1.95
CLIC3-203ENST00000494426 BAATQ14032 418 aaPredicted RBP27.22■■□□□ 1.95
CLIC3-203ENST00000494426 MAMDC4Q6UXC1 1216 aa27.22■■□□□ 1.95
CLIC3-203ENST00000494426 SYNE3Q6ZMZ3 975 aa27.22■■□□□ 1.95
CLIC3-203ENST00000494426 HOMER1Q86YM7 354 aa27.22■■□□□ 1.95
CLIC3-203ENST00000494426 U2AF1L4Q8WU68 220 aaKnown RBP27.22■■□□□ 1.95
CLIC3-203ENST00000494426 BRF1Q92994 677 aa27.22■■□□□ 1.95
CLIC3-203ENST00000494426 PURBQ96QR8 312 aaKnown RBP27.22■■□□□ 1.95
CLIC3-203ENST00000494426 LZTS2Q9BRK4 669 aa27.22■■□□□ 1.95
CLIC3-203ENST00000494426 AMNQ9BXJ7 453 aa27.22■■□□□ 1.95
CLIC3-203ENST00000494426 ASTN1O14525 1302 aa27.21■■□□□ 1.95
CLIC3-203ENST00000494426 ZBTB43O43298 467 aa27.21■■□□□ 1.95
CLIC3-203ENST00000494426 EIF5BO60841 1220 aaKnown RBP27.21■■□□□ 1.95
CLIC3-203ENST00000494426 GNAQP50148 359 aa27.21■■□□□ 1.95
CLIC3-203ENST00000494426 FGD1P98174 961 aa27.21■■□□□ 1.95
CLIC3-203ENST00000494426 TBC1D5Q92609 795 aa27.21■■□□□ 1.95
CLIC3-203ENST00000494426 CRISPLD2Q9H0B8 497 aa27.21■■□□□ 1.95
CLIC3-203ENST00000494426 CYP46A1Q9Y6A2 500 aa27.21■■□□□ 1.95
CLIC3-203ENST00000494426 SNAI1O95863 264 aaPredicted RBP27.2■■□□□ 1.94
CLIC3-203ENST00000494426 SLC30A10Q6XR72 485 aa27.2■■□□□ 1.94
CLIC3-203ENST00000494426 MSL3Q8N5Y2 521 aaKnown RBP27.2■■□□□ 1.94
CLIC3-203ENST00000494426 RGS22Q8NE09 1264 aa27.2■■□□□ 1.94
CLIC3-203ENST00000494426 IL17RAQ96F46 866 aa27.2■■□□□ 1.94
CLIC3-203ENST00000494426 UPF3BQ9BZI7 483 aaKnown RBP27.2■■□□□ 1.94
CLIC3-203ENST00000494426 FAM217BQ9NTX9 383 aaPredicted RBP27.2■■□□□ 1.94
CLIC3-203ENST00000494426 MCM3APO60318 1980 aa27.2■■□□□ 1.94
CLIC3-203ENST00000494426 PNMA6FA0A0J9YX94 578 aa27.19■■□□□ 1.94
CLIC3-203ENST00000494426 OPLAHO14841 1288 aa27.19■■□□□ 1.94
CLIC3-203ENST00000494426 ANAPC15P60006 121 aa27.19■■□□□ 1.94
CLIC3-203ENST00000494426 TOB2Q14106 344 aaPredicted RBP27.19■■□□□ 1.94
CLIC3-203ENST00000494426 LHX8Q68G74 356 aa27.19■■□□□ 1.94
CLIC3-203ENST00000494426 RNF207Q6ZRF8 634 aa27.19■■□□□ 1.94
CLIC3-203ENST00000494426 TMTC3Q6ZXV5 915 aa27.19■■□□□ 1.94
CLIC3-203ENST00000494426 PIBF1Q8WXW3 757 aa27.19■■□□□ 1.94
CLIC3-203ENST00000494426 SYNGAP1Q96PV0 1343 aa27.18■■□□□ 1.94
CLIC3-203ENST00000494426 PTPDC1A2A3K4 754 aa27.18■■□□□ 1.94
CLIC3-203ENST00000494426 RCAN1P53805 252 aa27.18■■□□□ 1.94
CLIC3-203ENST00000494426 EVCP57679 992 aa27.18■■□□□ 1.94
CLIC3-203ENST00000494426 RPS6P62753 249 aaKnown RBP27.18■■□□□ 1.94
CLIC3-203ENST00000494426 MRPL11Q9Y3B7 192 aaKnown RBP27.18■■□□□ 1.94
CLIC3-203ENST00000494426 PCDHA1Q9Y5I3 950 aa27.18■■□□□ 1.94
CLIC3-203ENST00000494426 FRMPD3Q5JV73 1810 aa27.18■■□□□ 1.94
CLIC3-203ENST00000494426 ZNF865P0CJ78 1059 aaPredicted RBP27.17■■□□□ 1.94
CLIC3-203ENST00000494426 CALML3P27482 149 aa27.17■■□□□ 1.94
CLIC3-203ENST00000494426 CDC27P30260 824 aa27.17■■□□□ 1.94
CLIC3-203ENST00000494426 RTN1Q16799 776 aa27.17■■□□□ 1.94
CLIC3-203ENST00000494426 RBM28Q9NW13 759 aaKnown RBP27.17■■□□□ 1.94
CLIC3-203ENST00000494426 DDX49Q9Y6V7 483 aaKnown RBP27.17■■□□□ 1.94
CLIC3-203ENST00000494426 GOLGA8AA7E2F4 631 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms