RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 RNF20Q5VTR2 975 aa25.55■■□□□ 1.68
HPS3-207ENST00000494327 ARMCX2Q7L311 632 aa25.55■■□□□ 1.68
HPS3-207ENST00000494327 PURBQ96QR8 312 aaKnown RBP25.55■■□□□ 1.68
HPS3-207ENST00000494327 MAD2L2Q9UI95 211 aa25.55■■□□□ 1.68
HPS3-207ENST00000494327 WDR19Q8NEZ3 1342 aa25.55■■□□□ 1.68
HPS3-207ENST00000494327 H0YGN5 161 aa25.54■■□□□ 1.68
HPS3-207ENST00000494327 RARBP10826 455 aa25.54■■□□□ 1.68
HPS3-207ENST00000494327 AKR1A1P14550 325 aa25.54■■□□□ 1.68
HPS3-207ENST00000494327 MCM5P33992 734 aa25.54■■□□□ 1.68
HPS3-207ENST00000494327 ACVR2BQ13705 512 aa25.54■■□□□ 1.68
HPS3-207ENST00000494327 CATIPQ7Z7H3 387 aa25.54■■□□□ 1.68
HPS3-207ENST00000494327 ARRDC4Q8NCT1 418 aa25.54■■□□□ 1.68
HPS3-207ENST00000494327 CLEC4DQ8WXI8 215 aa25.54■■□□□ 1.68
HPS3-207ENST00000494327 JMJD4Q9H9V9 463 aa25.54■■□□□ 1.68
HPS3-207ENST00000494327 GPHNQ9NQX3 736 aaPredicted RBP25.54■■□□□ 1.68
HPS3-207ENST00000494327 CALML3P27482 149 aa25.53■■□□□ 1.68
HPS3-207ENST00000494327 QRICH1Q2TAL8 776 aa25.53■■□□□ 1.68
HPS3-207ENST00000494327 NUP133Q8WUM0 1156 aa25.53■■□□□ 1.68
HPS3-207ENST00000494327 SENP6Q9GZR1 1112 aaPredicted RBP25.53■■□□□ 1.68
HPS3-207ENST00000494327 FAM184BQ9ULE4 1060 aa25.53■■□□□ 1.68
HPS3-207ENST00000494327 DDX49Q9Y6V7 483 aaKnown RBP25.53■■□□□ 1.68
HPS3-207ENST00000494327 PDE4DIPQ5VU43 2346 aa25.52■■□□□ 1.68
HPS3-207ENST00000494327 PALM3A6NDB9 673 aaPredicted RBP25.52■■□□□ 1.68
HPS3-207ENST00000494327 ASB14A6NK59 587 aa25.52■■□□□ 1.68
HPS3-207ENST00000494327 COL9A3Q14050 684 aaPredicted RBP25.52■■□□□ 1.68
HPS3-207ENST00000494327 GRM4Q14833 912 aa25.52■■□□□ 1.68
HPS3-207ENST00000494327 NFXL1Q6ZNB6 911 aa25.52■■□□□ 1.68
HPS3-207ENST00000494327 RNF207Q6ZRF8 634 aa25.52■■□□□ 1.68
HPS3-207ENST00000494327 LENG1Q96BZ8 264 aaPredicted RBP25.52■■□□□ 1.68
HPS3-207ENST00000494327 ABHD16BQ9H3Z7 469 aa25.52■■□□□ 1.68
HPS3-207ENST00000494327 LY9Q9HBG7 655 aa25.52■■□□□ 1.68
HPS3-207ENST00000494327 XPNPEP3Q9NQH7 507 aa25.52■■□□□ 1.68
HPS3-207ENST00000494327 NR2E3Q9Y5X4 410 aa25.52■■□□□ 1.68
HPS3-207ENST00000494327 DNM1LO00429 736 aa25.51■■□□□ 1.67
HPS3-207ENST00000494327 COL6A1P12109 1028 aa25.51■■□□□ 1.67
HPS3-207ENST00000494327 SLC30A10Q6XR72 485 aa25.51■■□□□ 1.67
HPS3-207ENST00000494327 LRRC2Q9BYS8 371 aa25.51■■□□□ 1.67
HPS3-207ENST00000494327 KBTBD13C9JR72 458 aa25.5■■□□□ 1.67
HPS3-207ENST00000494327 ASTN1O14525 1302 aa25.5■■□□□ 1.67
HPS3-207ENST00000494327 PGK1P00558 417 aa25.5■■□□□ 1.67
HPS3-207ENST00000494327 TROAPQ12815 778 aa25.5■■□□□ 1.67
HPS3-207ENST00000494327 FBXO11Q86XK2 927 aa25.5■■□□□ 1.67
HPS3-207ENST00000494327 TMEM87BQ96K49 555 aa25.5■■□□□ 1.67
HPS3-207ENST00000494327 MYL10Q9BUA6 226 aa25.5■■□□□ 1.67
HPS3-207ENST00000494327 ABCB11O95342 1321 aa25.49■■□□□ 1.67
HPS3-207ENST00000494327 CCDC69A6NI79 296 aa25.49■■□□□ 1.67
HPS3-207ENST00000494327 SH2B2O14492 632 aaPredicted RBP25.49■■□□□ 1.67
HPS3-207ENST00000494327 RPS6P62753 249 aaKnown RBP25.49■■□□□ 1.67
HPS3-207ENST00000494327 LRRC41Q15345 812 aa25.49■■□□□ 1.67
HPS3-207ENST00000494327 CCDC144BQ3MJ40 725 aa25.49■■□□□ 1.67
HPS3-207ENST00000494327 EEPD1Q7L9B9 569 aa25.49■■□□□ 1.67
HPS3-207ENST00000494327 C7orf61Q8IZ16 206 aa25.49■■□□□ 1.67
HPS3-207ENST00000494327 ZNF654Q8IZM8 581 aa25.49■■□□□ 1.67
HPS3-207ENST00000494327 NEK1Q96PY6 1258 aa25.49■■□□□ 1.67
HPS3-207ENST00000494327 MTA3Q9BTC8 594 aa25.49■■□□□ 1.67
HPS3-207ENST00000494327 ADD3Q9UEY8 706 aaKnown RBP25.49■■□□□ 1.67
HPS3-207ENST00000494327 ATN1P54259 1190 aaPredicted RBP25.48■■□□□ 1.67
HPS3-207ENST00000494327 HOMER1Q86YM7 354 aa25.48■■□□□ 1.67
HPS3-207ENST00000494327 RASEFQ8IZ41 740 aa25.48■■□□□ 1.67
HPS3-207ENST00000494327 TMTC2Q8N394 836 aa25.48■■□□□ 1.67
HPS3-207ENST00000494327 SMCHD1A6NHR9 2005 aa25.47■■□□□ 1.67
HPS3-207ENST00000494327 FRMPD3Q5JV73 1810 aa25.47■■□□□ 1.67
HPS3-207ENST00000494327 ALDH5A1P51649 535 aaPredicted RBP25.47■■□□□ 1.67
HPS3-207ENST00000494327 LRRC26Q2I0M4 334 aa25.47■■□□□ 1.67
HPS3-207ENST00000494327 RNF180Q86T96 592 aa25.47■■□□□ 1.67
HPS3-207ENST00000494327 TBC1D5Q92609 795 aa25.47■■□□□ 1.67
HPS3-207ENST00000494327 FERMT2Q96AC1 680 aa25.47■■□□□ 1.67
HPS3-207ENST00000494327 AMNQ9BXJ7 453 aa25.47■■□□□ 1.67
HPS3-207ENST00000494327 MRPL11Q9Y3B7 192 aaKnown RBP25.47■■□□□ 1.67
HPS3-207ENST00000494327 ZBTB5O15062 677 aa25.46■■□□□ 1.67
HPS3-207ENST00000494327 ADCYAP1R1P41586 468 aa25.46■■□□□ 1.67
HPS3-207ENST00000494327 SLC35G1Q2M3R5 365 aa25.46■■□□□ 1.67
HPS3-207ENST00000494327 ADCK5Q3MIX3 580 aa25.46■■□□□ 1.67
HPS3-207ENST00000494327 NOL8Q76FK4 1167 aaKnown RBP25.46■■□□□ 1.67
HPS3-207ENST00000494327 CTCFLQ8NI51 663 aaPredicted RBP25.46■■□□□ 1.67
HPS3-207ENST00000494327 PIBF1Q8WXW3 757 aa25.46■■□□□ 1.67
HPS3-207ENST00000494327 PIGSQ96S52 555 aa25.46■■□□□ 1.67
HPS3-207ENST00000494327 KATNBL1Q9H079 304 aa25.46■■□□□ 1.67
HPS3-207ENST00000494327 DDAH1O94760 285 aa25.45■■□□□ 1.66
HPS3-207ENST00000494327 RAB11FIP4Q86YS3 637 aa25.45■■□□□ 1.66
HPS3-207ENST00000494327 FBXO16Q8IX29 292 aaPredicted RBP25.45■■□□□ 1.66
HPS3-207ENST00000494327 RGS22Q8NE09 1264 aa25.45■■□□□ 1.66
HPS3-207ENST00000494327 MTMR8Q96EF0 704 aa25.45■■□□□ 1.66
HPS3-207ENST00000494327 TCEANC2Q96MN5 208 aa25.45■■□□□ 1.66
HPS3-207ENST00000494327 RIOX1Q9H6W3 641 aa25.45■■□□□ 1.66
HPS3-207ENST00000494327 ADCY6O43306 1168 aa25.44■■□□□ 1.66
HPS3-207ENST00000494327 CYTH3O43739 400 aa25.44■■□□□ 1.66
HPS3-207ENST00000494327 PPP1R11O60927 126 aaPredicted RBP25.44■■□□□ 1.66
HPS3-207ENST00000494327 DUSP11O75319 330 aaKnown RBP25.44■■□□□ 1.66
HPS3-207ENST00000494327 RXRAP19793 462 aa25.44■■□□□ 1.66
HPS3-207ENST00000494327 KIF5BP33176 963 aa25.44■■□□□ 1.66
HPS3-207ENST00000494327 LIFRP42702 1097 aa25.44■■□□□ 1.66
HPS3-207ENST00000494327 KRT32Q14532 448 aa25.44■■□□□ 1.66
HPS3-207ENST00000494327 TSGA10IPQ3SY00 556 aa25.44■■□□□ 1.66
HPS3-207ENST00000494327 MCF2L2Q86YR7 1114 aa25.44■■□□□ 1.66
HPS3-207ENST00000494327 PDGFCQ9NRA1 345 aa25.44■■□□□ 1.66
HPS3-207ENST00000494327 ZMYND8Q9ULU4 1186 aaPredicted RBP25.44■■□□□ 1.66
HPS3-207ENST00000494327 PCDHA1Q9Y5I3 950 aa25.44■■□□□ 1.66
HPS3-207ENST00000494327 SYNRGQ9UMZ2 1314 aa25.43■■□□□ 1.66
HPS3-207ENST00000494327 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms