RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 DESI2Q9BSY9 194 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 FAM204AQ9H8W3 233 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 GJB4Q9NTQ9 266 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 PIM2Q9P1W9 311 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 PNPLA6Q8IY17 1366 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 PPP6R2O75170 966 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 GH2P01242 217 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 CAPN2P17655 700 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 USP14P54578 494 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 RPS6KA1Q15418 735 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 CDC42BPGQ6DT37 1551 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 ARFGAP2Q8N6H7 521 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 ACTN4O43707 911 aaKnown RBP12.89□□□□□ -0.35
COL25A1-204ENST00000494183 U2AF2P26368 475 aaKnown RBP eCLIP12.89□□□□□ -0.35
COL25A1-204ENST00000494183 SNX16P57768 344 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
COL25A1-204ENST00000494183 TRIM28Q13263 835 aaKnown RBP12.89□□□□□ -0.35
COL25A1-204ENST00000494183 RASA3Q14644 834 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 KLHL7Q8IXQ5 586 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 PPM1KQ8N3J5 372 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 U2AF1L4Q8WU68 220 aaKnown RBP12.89□□□□□ -0.35
COL25A1-204ENST00000494183 ADPGKQ9BRR6 497 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 NRBP2Q9NSY0 501 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 RIOK3O14730 519 aaKnown RBP12.88□□□□□ -0.35
COL25A1-204ENST00000494183 ZBTB16Q05516 673 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 TBC1D10BQ4KMP7 808 aaPredicted RBP12.88□□□□□ -0.35
COL25A1-204ENST00000494183 PODNQ7Z5L7 613 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 GAS2L3Q86XJ1 694 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 SMYD4Q8IYR2 804 aaPredicted RBP12.88□□□□□ -0.35
COL25A1-204ENST00000494183 VPS18Q9P253 973 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 E7EVH7 732 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 PRPF3O43395 683 aaKnown RBP12.88□□□□□ -0.35
COL25A1-204ENST00000494183 YARSP54577 528 aaKnown RBP12.88□□□□□ -0.35
COL25A1-204ENST00000494183 NFIXQ14938 502 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 EEPD1Q7L9B9 569 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 DAAM2Q86T65 1068 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 FBF1Q8TES7 1133 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 BRIP1Q9BX63 1249 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 GLI2P10070 1586 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 FAM196BA6NMK8 535 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 LAD1O00515 517 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 CCNA1P78396 465 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
COL25A1-204ENST00000494183 DMP1Q13316 513 aaPredicted RBP12.88□□□□□ -0.35
COL25A1-204ENST00000494183 GBP6Q6ZN66 633 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 GRAMD1CQ8IYS0 662 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 HACE1Q8IYU2 909 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 PLCD3Q8N3E9 789 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 GOLGA5Q8TBA6 731 aa12.88□□□□□ -0.35
COL25A1-204ENST00000494183 GCFC2P16383 781 aaKnown RBP12.87□□□□□ -0.35
COL25A1-204ENST00000494183 TMOD1P28289 359 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 SLC44A5Q8NCS7 719 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 METTL14Q9HCE5 456 aaKnown RBP12.87□□□□□ -0.35
COL25A1-204ENST00000494183 ASIC3Q9UHC3 531 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 RSPH14Q9UHP6 348 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 CDHR2Q9BYE9 1310 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 HNRNPDLO14979 420 aaKnown RBP12.87□□□□□ -0.35
COL25A1-204ENST00000494183 PLEKHA8P1O95397 391 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 POLR2FP61218 127 aaKnown RBP12.87□□□□□ -0.35
COL25A1-204ENST00000494183 UAP1Q16222 522 aaPredicted RBP12.87□□□□□ -0.35
COL25A1-204ENST00000494183 GPR161Q8N6U8 529 aaKnown RBP12.87□□□□□ -0.35
COL25A1-204ENST00000494183 POMGNT1Q8WZA1 660 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 CPVLQ9H3G5 476 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 ASNSP08243 561 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 UBE2SQ16763 222 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 DPCR1Q3MIW9 517 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 SYDE2Q5VT97 1194 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 SLC7A3Q8WY07 619 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 ATP6V0A1Q93050 837 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 MRRFQ96E11 262 aaKnown RBP12.87□□□□□ -0.35
COL25A1-204ENST00000494183 TTC14Q96N46 770 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 NACA2Q9H009 215 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 CRKP46108 304 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 LRRC41Q15345 812 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 PPP1R21Q6ZMI0 780 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 SEPT14Q6ZU15 432 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 CCDC51Q96ER9 411 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 AK8Q96MA6 479 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 ANKFY1Q9P2R3 1169 aa12.87□□□□□ -0.35
COL25A1-204ENST00000494183 MEIS1O00470 390 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 CPLX4Q7Z7G2 160 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 NSRP1Q9H0G5 558 aaKnown RBP12.86□□□□□ -0.35
COL25A1-204ENST00000494183 C1orf167Q5SNV9 1468 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 H0YCG3 227 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 SLFN14P0C7P3 912 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 HOXA13P31271 388 aaPredicted RBP12.86□□□□□ -0.35
COL25A1-204ENST00000494183 MRPS9P82933 396 aaKnown RBP12.86□□□□□ -0.35
COL25A1-204ENST00000494183 HDXQ7Z353 690 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 MMS19Q96T76 1030 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 WDR11Q9BZH6 1224 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 SERPINA10Q9UK55 444 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 P4HA1P13674 534 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 TUBB2AQ13885 445 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 KIF22Q14807 665 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 CDC37Q16543 378 aaPredicted RBP12.86□□□□□ -0.35
COL25A1-204ENST00000494183 PTPROQ16827 1216 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 TBC1D10CQ8IV04 446 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 ANKRD13CQ8N6S4 541 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 TUBGCP2Q9BSJ2 902 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms