RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 ATP8B1O43520 1251 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 FGFR1OPO95684 399 aaKnown RBP10.83□□□□□ -0.68
NPHP3-209ENST00000493732 NPR1P16066 1061 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 FXR2P51116 673 aaKnown RBP eCLIP10.83□□□□□ -0.68
NPHP3-209ENST00000493732 GTF2IP78347 998 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 UBXN1Q04323 297 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 GOLGA8FQ08AF8 430 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 GOLGA8DPQ0D2H9 430 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 BMS1Q14692 1282 aaKnown RBP10.83□□□□□ -0.68
NPHP3-209ENST00000493732 JAKMIP3Q5VZ66 844 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 TBCKQ8TEA7 893 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 CPLX3Q8WVH0 158 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 GPR101Q96P66 508 aaPredicted RBP10.83□□□□□ -0.68
NPHP3-209ENST00000493732 PIGSQ96S52 555 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 MRIQ9BWK5 157 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 ABHD10Q9NUJ1 306 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 MTMR7Q9Y216 660 aa10.83□□□□□ -0.68
NPHP3-209ENST00000493732 FOCADQ5VW36 1801 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 PNMA6FA0A0J9YX94 578 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 PVALEFA0A1B0GWK0 134 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 LGALS16A8MUM7 142 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 KLRC4O43908 158 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 GYPCP04921 128 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 H2AFXP16104 143 aaPredicted RBP10.82□□□□□ -0.68
NPHP3-209ENST00000493732 CCNE1P24864 410 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 PDE6BP35913 854 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 CCT6AP40227 531 aaKnown RBP10.82□□□□□ -0.68
NPHP3-209ENST00000493732 MRPL12P52815 198 aaKnown RBP10.82□□□□□ -0.68
NPHP3-209ENST00000493732 ERCC6LQ2NKX8 1250 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 ARHGAP29Q52LW3 1261 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 MCTP2Q6DN12 878 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 SV2BQ7L1I2 683 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 FLAD1Q8NFF5 587 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 CDK5RAP3Q96JB5 506 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 TRIM47Q96LD4 638 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 VPS16Q9H269 839 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 IGKV6D-41A0A0C4DH26 115 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 SOWAHDA6NJG2 315 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 USP17L5A8MUK1 530 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 G3V3G9 751 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 ADAMTS3O15072 1205 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 TADA3O75528 432 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 GCFC2P16383 781 aaKnown RBP10.82□□□□□ -0.68
NPHP3-209ENST00000493732 PLCG1P19174 1290 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 CDC25AP30304 524 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 FAM193AP78312 1265 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 CBX1P83916 185 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 DDR1Q08345 913 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 NAA30Q147X3 362 aaPredicted RBP10.82□□□□□ -0.68
NPHP3-209ENST00000493732 TXNRD1Q16881 649 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 DCAF8Q5TAQ9 597 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 PPP4R3AQ6IN85 833 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 FOXR2Q6PJQ5 311 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 KRT222Q8N1A0 295 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 GPR161Q8N6U8 529 aaKnown RBP10.82□□□□□ -0.68
NPHP3-209ENST00000493732 MB21D1Q8N884 522 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 CEP112Q8N8E3 955 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 OR8K1Q8NGG5 319 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 P2RX5Q93086 422 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 TEKT1Q969V4 418 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 TRIM9Q9C026 710 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 EHD4Q9H223 541 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 TAB2Q9NYJ8 693 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 LRWD1Q9UFC0 647 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 GDAQ9Y2T3 454 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 LUC7L2Q9Y383 392 aaKnown RBP10.82□□□□□ -0.68
NPHP3-209ENST00000493732 MRFAP1Q9Y605 127 aa10.82□□□□□ -0.68
NPHP3-209ENST00000493732 POTEB2H3BUK9 544 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 KRT9P35527 623 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 FKBP1AP62942 108 aaKnown RBP10.81□□□□□ -0.68
NPHP3-209ENST00000493732 PDE4DQ08499 809 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 ZNF543Q08ER8 600 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 PSMD2Q13200 908 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 LTBP1Q14766 1721 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 SEPT2Q15019 361 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 CALCRLQ16602 461 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 PTPN21Q16825 1174 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 FBXO38Q6PIJ6 1188 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 CSGALNACT2Q8N6G5 542 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 RABGGTAQ92696 567 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 MTMR9Q96QG7 549 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 ARID3AQ99856 593 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 DHX36Q9H2U1 1008 aaKnown RBP10.81□□□□□ -0.68
NPHP3-209ENST00000493732 VAT1LQ9HCJ6 419 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 RIC8AQ9NPQ8 531 aa10.81□□□□□ -0.68
NPHP3-209ENST00000493732 ZNHIT6Q9NWK9 470 aaKnown RBP10.81□□□□□ -0.68
NPHP3-209ENST00000493732 QSER1Q2KHR3 1735 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 ABCB11O95342 1321 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 TUBBP07437 444 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 TECP42680 631 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 FXR1P51114 621 aaKnown RBP eCLIP10.8□□□□□ -0.68
NPHP3-209ENST00000493732 ASIC1P78348 528 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 KRT83P78385 493 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 PPP2R3AQ06190 1150 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 GABPB1Q06547 395 aaPredicted RBP10.8□□□□□ -0.68
NPHP3-209ENST00000493732 KRT79Q5XKE5 535 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 TTI2Q6NXR4 508 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 TMCO3Q6UWJ1 677 aa10.8□□□□□ -0.68
NPHP3-209ENST00000493732 DPP8Q6V1X1 898 aaPredicted RBP10.8□□□□□ -0.68
NPHP3-209ENST00000493732 RAD9BQ6WBX8 426 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms