RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 VTI1AQ96AJ9 217 aa15.89■□□□□ 0.13
IRF1-210ENST00000493208 VTA1Q9NP79 307 aa15.89■□□□□ 0.13
IRF1-210ENST00000493208 PRDM5Q9NQX1 630 aaPredicted RBP15.89■□□□□ 0.13
IRF1-210ENST00000493208 CYP39A1Q9NYL5 469 aa15.89■□□□□ 0.13
IRF1-210ENST00000493208 CEP290O15078 2479 aa15.89■□□□□ 0.13
IRF1-210ENST00000493208 ZNF536O15090 1300 aa15.89■□□□□ 0.13
IRF1-210ENST00000493208 TNKSO95271 1327 aa15.89■□□□□ 0.13
IRF1-210ENST00000493208 NEDD4P46934 1319 aa15.89■□□□□ 0.13
IRF1-210ENST00000493208 SNAI1O95863 264 aaPredicted RBP15.88■□□□□ 0.13
IRF1-210ENST00000493208 PGK1P00558 417 aa15.88■□□□□ 0.13
IRF1-210ENST00000493208 SNHG28P0DPA3 235 aa15.88■□□□□ 0.13
IRF1-210ENST00000493208 CST5P28325 142 aaPredicted RBP15.88■□□□□ 0.13
IRF1-210ENST00000493208 SLC16A2P36021 539 aa15.88■□□□□ 0.13
IRF1-210ENST00000493208 IRX6P78412 446 aaPredicted RBP15.88■□□□□ 0.13
IRF1-210ENST00000493208 TNFAIP2Q03169 654 aa15.88■□□□□ 0.13
IRF1-210ENST00000493208 IQSEC1Q6DN90 963 aa15.88■□□□□ 0.13
IRF1-210ENST00000493208 GPR153Q6NV75 609 aa15.88■□□□□ 0.13
IRF1-210ENST00000493208 RNF207Q6ZRF8 634 aa15.88■□□□□ 0.13
IRF1-210ENST00000493208 ZKSCAN3Q9BRR0 538 aa15.88■□□□□ 0.13
IRF1-210ENST00000493208 PRO3102Q9H379 93 aa15.88■□□□□ 0.13
IRF1-210ENST00000493208 Q9Y3F1 56 aa15.88■□□□□ 0.13
IRF1-210ENST00000493208 ELP1O95163 1332 aa15.88■□□□□ 0.13
IRF1-210ENST00000493208 SYNRGQ9UMZ2 1314 aa15.88■□□□□ 0.13
IRF1-210ENST00000493208 TLR3O15455 904 aaKnown RBP15.87■□□□□ 0.13
IRF1-210ENST00000493208 ACLYP53396 1101 aa15.87■□□□□ 0.13
IRF1-210ENST00000493208 SNX17Q15036 470 aa15.87■□□□□ 0.13
IRF1-210ENST00000493208 DNERQ8NFT8 737 aa15.87■□□□□ 0.13
IRF1-210ENST00000493208 NCOA7Q8NI08 942 aa15.87■□□□□ 0.13
IRF1-210ENST00000493208 FERMT2Q96AC1 680 aa15.87■□□□□ 0.13
IRF1-210ENST00000493208 ZSWIM5Q9P217 1185 aa15.87■□□□□ 0.13
IRF1-210ENST00000493208 ABCB11O95342 1321 aa15.87■□□□□ 0.13
IRF1-210ENST00000493208 A0A1W2PQ45 241 aaPredicted RBP15.86■□□□□ 0.13
IRF1-210ENST00000493208 A0A1W2PQY0 241 aa15.86■□□□□ 0.13
IRF1-210ENST00000493208 ADAMTS4O75173 837 aa15.86■□□□□ 0.13
IRF1-210ENST00000493208 GSPT1P15170 499 aaKnown RBP15.86■□□□□ 0.13
IRF1-210ENST00000493208 TAL1P17542 331 aaPredicted RBP15.86■□□□□ 0.13
IRF1-210ENST00000493208 CHMLP26374 656 aa15.86■□□□□ 0.13
IRF1-210ENST00000493208 GJA9P57773 515 aa15.86■□□□□ 0.13
IRF1-210ENST00000493208 PDE4DQ08499 809 aa15.86■□□□□ 0.13
IRF1-210ENST00000493208 GNASQ5JWF2 1037 aa15.86■□□□□ 0.13
IRF1-210ENST00000493208 CENPQQ7L2Z9 268 aaPredicted RBP15.86■□□□□ 0.13
IRF1-210ENST00000493208 RGS22Q8NE09 1264 aa15.86■□□□□ 0.13
IRF1-210ENST00000493208 TOX2Q96NM4 488 aa15.86■□□□□ 0.13
IRF1-210ENST00000493208 MRPL11Q9Y3B7 192 aaKnown RBP15.86■□□□□ 0.13
IRF1-210ENST00000493208 FRMPD3Q5JV73 1810 aa15.85■□□□□ 0.13
IRF1-210ENST00000493208 PLXNA1Q9UIW2 1896 aa15.85■□□□□ 0.13
IRF1-210ENST00000493208 NKRFO15226 690 aaKnown RBP eCLIP15.85■□□□□ 0.13
IRF1-210ENST00000493208 CLTBP09497 229 aa15.85■□□□□ 0.13
IRF1-210ENST00000493208 PDE4AP27815 886 aa15.85■□□□□ 0.13
IRF1-210ENST00000493208 MDM2Q00987 491 aaPredicted RBP15.85■□□□□ 0.13
IRF1-210ENST00000493208 CNTN2Q02246 1040 aa15.85■□□□□ 0.13
IRF1-210ENST00000493208 LRIT3Q3SXY7 679 aa15.85■□□□□ 0.13
IRF1-210ENST00000493208 TRIM60Q495X7 471 aa15.85■□□□□ 0.13
IRF1-210ENST00000493208 TTBK2Q6IQ55 1244 aa15.85■□□□□ 0.13
IRF1-210ENST00000493208 ENAHQ8N8S7 591 aaPredicted RBP15.85■□□□□ 0.13
IRF1-210ENST00000493208 ZNFX1Q9P2E3 1918 aaKnown RBP15.84■□□□□ 0.13
IRF1-210ENST00000493208 A0A0U1RQG5 324 aaPredicted RBP15.84■□□□□ 0.13
IRF1-210ENST00000493208 IFIT3O14879 490 aaKnown RBP15.84■□□□□ 0.13
IRF1-210ENST00000493208 RAG1P15918 1043 aa15.84■□□□□ 0.13
IRF1-210ENST00000493208 CALML3P27482 149 aa15.84■□□□□ 0.13
IRF1-210ENST00000493208 CPT1AP50416 773 aa15.84■□□□□ 0.13
IRF1-210ENST00000493208 SNAP25P60880 206 aa15.84■□□□□ 0.13
IRF1-210ENST00000493208 BAATQ14032 418 aaPredicted RBP15.84■□□□□ 0.13
IRF1-210ENST00000493208 KCNA10Q16322 511 aa15.84■□□□□ 0.13
IRF1-210ENST00000493208 CDC37Q16543 378 aaPredicted RBP15.84■□□□□ 0.13
IRF1-210ENST00000493208 MUM1L1Q5H9M0 696 aa15.84■□□□□ 0.13
IRF1-210ENST00000493208 RNF20Q5VTR2 975 aa15.84■□□□□ 0.13
IRF1-210ENST00000493208 CATIPQ7Z7H3 387 aa15.84■□□□□ 0.13
IRF1-210ENST00000493208 TLK2Q86UE8 772 aa15.84■□□□□ 0.13
IRF1-210ENST00000493208 FBXO11Q86XK2 927 aa15.84■□□□□ 0.13
IRF1-210ENST00000493208 SAMD3Q8N6K7 520 aa15.84■□□□□ 0.13
IRF1-210ENST00000493208 KLHDC9Q8NEP7 349 aa15.84■□□□□ 0.13
IRF1-210ENST00000493208 UPF3AQ9H1J1 476 aaKnown RBP15.84■□□□□ 0.13
IRF1-210ENST00000493208 GPHNQ9NQX3 736 aaPredicted RBP15.84■□□□□ 0.13
IRF1-210ENST00000493208 TMEM39AQ9NV64 488 aa15.84■□□□□ 0.13
IRF1-210ENST00000493208 MAP3K20Q9NYL2 800 aaKnown RBP15.84■□□□□ 0.13
IRF1-210ENST00000493208 LAMA4Q16363 1823 aa15.83■□□□□ 0.12
IRF1-210ENST00000493208 SOWAHBA6NEL2 793 aa15.83■□□□□ 0.12
IRF1-210ENST00000493208 SGSM2O43147 1006 aa15.83■□□□□ 0.12
IRF1-210ENST00000493208 PQBP1O60828 265 aaKnown RBP15.83■□□□□ 0.12
IRF1-210ENST00000493208 ALDH5A1P51649 535 aaPredicted RBP15.83■□□□□ 0.12
IRF1-210ENST00000493208 TLE2Q04725 743 aa15.83■□□□□ 0.12
IRF1-210ENST00000493208 WTAPQ15007 396 aa15.83■□□□□ 0.12
IRF1-210ENST00000493208 USH1GQ495M9 461 aa15.83■□□□□ 0.12
IRF1-210ENST00000493208 ANKRD33Q7Z3H0 272 aa15.83■□□□□ 0.12
IRF1-210ENST00000493208 TMTC2Q8N394 836 aa15.83■□□□□ 0.12
IRF1-210ENST00000493208 MTA3Q9BTC8 594 aa15.83■□□□□ 0.12
IRF1-210ENST00000493208 AMNQ9BXJ7 453 aa15.83■□□□□ 0.12
IRF1-210ENST00000493208 POLR3EQ9NVU0 708 aa15.83■□□□□ 0.12
IRF1-210ENST00000493208 KPNA6O60684 536 aa15.82■□□□□ 0.12
IRF1-210ENST00000493208 ASGR1P07306 291 aa15.82■□□□□ 0.12
IRF1-210ENST00000493208 GOLGA8HP0CJ92 632 aa15.82■□□□□ 0.12
IRF1-210ENST00000493208 KIF5BP33176 963 aa15.82■□□□□ 0.12
IRF1-210ENST00000493208 RPS6P62753 249 aaKnown RBP15.82■□□□□ 0.12
IRF1-210ENST00000493208 FSCN1Q16658 493 aaKnown RBP15.82■□□□□ 0.12
IRF1-210ENST00000493208 ADGRF4Q8IZF3 695 aa15.82■□□□□ 0.12
IRF1-210ENST00000493208 MORC4Q8TE76 937 aa15.82■□□□□ 0.12
IRF1-210ENST00000493208 NSUN6Q8TEA1 469 aaKnown RBP15.82■□□□□ 0.12
IRF1-210ENST00000493208 SCFD2Q8WU76 684 aa15.82■□□□□ 0.12
IRF1-210ENST00000493208 NFIBO00712 420 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms