RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 GJA9P57773 515 aa13.47□□□□□ -0.25
LRTM1-202ENST00000493075 CCDC144BQ3MJ40 725 aa13.47□□□□□ -0.25
LRTM1-202ENST00000493075 CCSAPQ6IQ19 270 aaPredicted RBP13.47□□□□□ -0.25
LRTM1-202ENST00000493075 ENAHQ8N8S7 591 aaPredicted RBP13.47□□□□□ -0.25
LRTM1-202ENST00000493075 MORC4Q8TE76 937 aa13.47□□□□□ -0.25
LRTM1-202ENST00000493075 FERMT2Q96AC1 680 aa13.47□□□□□ -0.25
LRTM1-202ENST00000493075 UPF3AQ9H1J1 476 aaKnown RBP13.47□□□□□ -0.25
LRTM1-202ENST00000493075 SPC25Q9HBM1 224 aa13.47□□□□□ -0.25
LRTM1-202ENST00000493075 ADD3Q9UEY8 706 aaKnown RBP13.47□□□□□ -0.25
LRTM1-202ENST00000493075 PRKAG2Q9UGJ0 569 aa13.47□□□□□ -0.25
LRTM1-202ENST00000493075 ATP11BQ9Y2G3 1177 aa13.47□□□□□ -0.25
LRTM1-202ENST00000493075 MYH4Q9Y623 1939 aa13.47□□□□□ -0.25
LRTM1-202ENST00000493075 SYNRGQ9UMZ2 1314 aa13.46□□□□□ -0.25
LRTM1-202ENST00000493075 A0A1W2PQ45 241 aaPredicted RBP13.46□□□□□ -0.25
LRTM1-202ENST00000493075 A0A1W2PQY0 241 aa13.46□□□□□ -0.25
LRTM1-202ENST00000493075 LRIT3Q3SXY7 679 aa13.46□□□□□ -0.25
LRTM1-202ENST00000493075 NSMFQ6X4W1 530 aa13.46□□□□□ -0.25
LRTM1-202ENST00000493075 TDHQ8IZJ6 230 aa13.46□□□□□ -0.25
LRTM1-202ENST00000493075 PCSK9Q8NBP7 692 aaKnown RBP13.46□□□□□ -0.25
LRTM1-202ENST00000493075 RGS22Q8NE09 1264 aa13.46□□□□□ -0.25
LRTM1-202ENST00000493075 NUP133Q8WUM0 1156 aa13.46□□□□□ -0.25
LRTM1-202ENST00000493075 CLEC4DQ8WXI8 215 aa13.46□□□□□ -0.25
LRTM1-202ENST00000493075 LBHD1Q9BQE6 289 aaPredicted RBP13.46□□□□□ -0.25
LRTM1-202ENST00000493075 UBE2OQ9C0C9 1292 aaKnown RBP13.46□□□□□ -0.25
LRTM1-202ENST00000493075 ELP1O95163 1332 aa13.45□□□□□ -0.26
LRTM1-202ENST00000493075 SGSM2O43147 1006 aa13.45□□□□□ -0.26
LRTM1-202ENST00000493075 ACLYP53396 1101 aa13.45□□□□□ -0.26
LRTM1-202ENST00000493075 TNFAIP2Q03169 654 aa13.45□□□□□ -0.26
LRTM1-202ENST00000493075 TRDNQ13061 729 aa13.45□□□□□ -0.26
LRTM1-202ENST00000493075 BAATQ14032 418 aaPredicted RBP13.45□□□□□ -0.26
LRTM1-202ENST00000493075 KCNA10Q16322 511 aa13.45□□□□□ -0.26
LRTM1-202ENST00000493075 TRIM60Q495X7 471 aa13.45□□□□□ -0.26
LRTM1-202ENST00000493075 ASPRV1Q53RT3 343 aa13.45□□□□□ -0.26
LRTM1-202ENST00000493075 IQSEC1Q6DN90 963 aa13.45□□□□□ -0.26
LRTM1-202ENST00000493075 LENG1Q96BZ8 264 aaPredicted RBP13.45□□□□□ -0.26
LRTM1-202ENST00000493075 TOX2Q96NM4 488 aa13.45□□□□□ -0.26
LRTM1-202ENST00000493075 UBAC1Q9BSL1 405 aa13.45□□□□□ -0.26
LRTM1-202ENST00000493075 Q9Y3F1 56 aa13.45□□□□□ -0.26
LRTM1-202ENST00000493075 ASTN1O14525 1302 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 TNKSO95271 1327 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 CEP290O15078 2479 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 NFIBO00712 420 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 ADCY6O43306 1168 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 CYP21A2P08686 494 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 GOLGA8HP0CJ92 632 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 MDM2Q00987 491 aaPredicted RBP13.44□□□□□ -0.26
LRTM1-202ENST00000493075 PTH1RQ03431 593 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 TLE2Q04725 743 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 SEC23AQ15436 765 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 IFIT1BQ5T764 474 aaKnown RBP13.44□□□□□ -0.26
LRTM1-202ENST00000493075 GPR153Q6NV75 609 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 ANKRD33Q7Z3H0 272 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 MAP4K1Q92918 833 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 UBA5Q9GZZ9 404 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 VTA1Q9NP79 307 aa13.44□□□□□ -0.26
LRTM1-202ENST00000493075 GNEQ9Y223 722 aaKnown RBP13.44□□□□□ -0.26
LRTM1-202ENST00000493075 ZNFX1Q9P2E3 1918 aaKnown RBP13.44□□□□□ -0.26
LRTM1-202ENST00000493075 PTPDC1A2A3K4 754 aa13.43□□□□□ -0.26
LRTM1-202ENST00000493075 CTAGE5O15320 804 aa13.43□□□□□ -0.26
LRTM1-202ENST00000493075 PARP1P09874 1014 aaKnown RBP13.43□□□□□ -0.26
LRTM1-202ENST00000493075 C6orf222P0C671 652 aaPredicted RBP13.43□□□□□ -0.26
LRTM1-202ENST00000493075 GNASQ5JWF2 1037 aa13.43□□□□□ -0.26
LRTM1-202ENST00000493075 TAPT1Q6NXT6 567 aa13.43□□□□□ -0.26
LRTM1-202ENST00000493075 RNF207Q6ZRF8 634 aa13.43□□□□□ -0.26
LRTM1-202ENST00000493075 ADGRF4Q8IZF3 695 aa13.43□□□□□ -0.26
LRTM1-202ENST00000493075 DNERQ8NFT8 737 aa13.43□□□□□ -0.26
LRTM1-202ENST00000493075 GLT1D1Q96MS3 346 aa13.43□□□□□ -0.26
LRTM1-202ENST00000493075 STARD7Q9NQZ5 370 aa13.43□□□□□ -0.26
LRTM1-202ENST00000493075 PDLIM7Q9NR12 457 aa13.43□□□□□ -0.26
LRTM1-202ENST00000493075 ALPK3Q96L96 1907 aa13.43□□□□□ -0.26
LRTM1-202ENST00000493075 RANBP2P49792 3224 aaKnown RBP13.43□□□□□ -0.26
LRTM1-202ENST00000493075 MYADML2A6NDP7 307 aa13.42□□□□□ -0.26
LRTM1-202ENST00000493075 B4DLN1 442 aa13.42□□□□□ -0.26
LRTM1-202ENST00000493075 SOX1O00570 391 aaPredicted RBP13.42□□□□□ -0.26
LRTM1-202ENST00000493075 ASGR1P07306 291 aa13.42□□□□□ -0.26
LRTM1-202ENST00000493075 CDK7P50613 346 aa13.42□□□□□ -0.26
LRTM1-202ENST00000493075 ALDH5A1P51649 535 aaPredicted RBP13.42□□□□□ -0.26
LRTM1-202ENST00000493075 MRPL12P52815 198 aaKnown RBP13.42□□□□□ -0.26
LRTM1-202ENST00000493075 RPS6P62753 249 aaKnown RBP13.42□□□□□ -0.26
LRTM1-202ENST00000493075 CYB5R4Q7L1T6 521 aa13.42□□□□□ -0.26
LRTM1-202ENST00000493075 PURBQ96QR8 312 aaKnown RBP13.42□□□□□ -0.26
LRTM1-202ENST00000493075 MPHOSPH6Q99547 160 aaKnown RBP13.42□□□□□ -0.26
LRTM1-202ENST00000493075 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.41□□□□□ -0.26
LRTM1-202ENST00000493075 RBM47A0AV96 593 aaKnown RBP13.41□□□□□ -0.26
LRTM1-202ENST00000493075 TRIM43BA6NCK2 446 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 DCDC2CA8MYV0 355 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 E7EWF7 191 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 KIAA0355O15063 1070 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 ZEB2O60315 1214 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 CABYRO75952 493 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 CLTBP09497 229 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 SMPD1P17405 629 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 EDNRBP24530 442 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 CALML3P27482 149 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 CDC37Q16543 378 aaPredicted RBP13.41□□□□□ -0.26
LRTM1-202ENST00000493075 KIAA1211Q6ZU35 1233 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 NOL8Q76FK4 1167 aaKnown RBP13.41□□□□□ -0.26
LRTM1-202ENST00000493075 CENPQQ7L2Z9 268 aaPredicted RBP13.41□□□□□ -0.26
LRTM1-202ENST00000493075 NCOA7Q8NI08 942 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 TRIM43Q96BQ3 446 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms