RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 STAG2Q8N3U4 1231 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 FAM133AQ8N9E0 248 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 CTCFLQ8NI51 663 aaPredicted RBP12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 CPVLQ9H3G5 476 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 JMJD4Q9H9V9 463 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 CYP39A1Q9NYL5 469 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 DDX20Q9UHI6 824 aaKnown RBP12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 OGDHLQ9ULD0 1010 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 CNPY2Q9Y2B0 182 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 ABCB11O95342 1321 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 SEPT4O43236 478 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 EIF5BO60841 1220 aaKnown RBP12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 CALM1P0DP23 149 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 CALM2P0DP24 149 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 CALM3P0DP25 149 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 CNGA1P29973 690 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 QRICH1Q2TAL8 776 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 ADCK5Q3MIX3 580 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 LHX8Q68G74 356 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 NSMFQ6X4W1 530 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 NFXL1Q6ZNB6 911 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 DHX32Q7L7V1 743 aaKnown RBP12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 UBE2Q1Q7Z7E8 422 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 SGMS1Q86VZ5 419 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 TRPV1Q8NER1 839 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 NUP133Q8WUM0 1156 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 MTMR8Q96EF0 704 aa12.4□□□□□ -0.42
CDC42SE1-206ENST00000492796 SMCHD1A6NHR9 2005 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 LOC102724159A0A0B4J2E5 919 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 ASB14A6NK59 587 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 NFIBO00712 420 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 ZBTB5O15062 677 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 TAL1P17542 331 aaPredicted RBP12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 EXOSC10Q01780 885 aaKnown RBP12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 TRAF1Q13077 416 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 COL9A3Q14050 684 aaPredicted RBP12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 PWP2Q15269 919 aaKnown RBP12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 USH1GQ495M9 461 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 FBXO11Q86XK2 927 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 RGS22Q8NE09 1264 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 CLEC4DQ8WXI8 215 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 FGD4Q96M96 766 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 LZTS2Q9BRK4 669 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 AMNQ9BXJ7 453 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 RIOX1Q9H6W3 641 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 ADD3Q9UEY8 706 aaKnown RBP12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 SNX14Q9Y5W7 946 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 SLC12A7Q9Y666 1083 aa12.39□□□□□ -0.43
CDC42SE1-206ENST00000492796 PTPDC1A2A3K4 754 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 AKR1A1P14550 325 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 PSMA5P28066 241 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 SMARCA1P28370 1054 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 GNAQP50148 359 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 CNTN2Q02246 1040 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 SYNE3Q6ZMZ3 975 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 RNF207Q6ZRF8 634 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 ARMCX2Q7L311 632 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 NECAB2Q7Z6G3 386 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 MCF2L2Q86YR7 1114 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 CCDC144CPQ8IYA2 1237 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 MPHOSPH6Q99547 160 aaKnown RBP12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 HTATIP2Q9BUP3 242 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 SPZ1Q9BXG8 430 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 LRRC2Q9BYS8 371 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 ABHD16BQ9H3Z7 469 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 VAT1LQ9HCJ6 419 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 GPHNQ9NQX3 736 aaPredicted RBP12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 MRPL11Q9Y3B7 192 aaKnown RBP12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 MCM3APO60318 1980 aa12.38□□□□□ -0.43
CDC42SE1-206ENST00000492796 SOWAHBA6NEL2 793 aa12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 CYTH3O43739 400 aa12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 SNAI1O95863 264 aaPredicted RBP12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 ZNF865P0CJ78 1059 aaPredicted RBP12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 HOXD11P31277 338 aaPredicted RBP12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 RCAN1P53805 252 aa12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 BAATQ14032 418 aaPredicted RBP12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 PRAMEF19Q5SWL8 479 aa12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 BLOC1S2Q6QNY1 142 aa12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 SLC30A10Q6XR72 485 aa12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 JAKMIP1Q96N16 626 aaKnown RBP12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 MYL10Q9BUA6 226 aa12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 USP26Q9BXU7 913 aa12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 ASTN1O14525 1302 aa12.37□□□□□ -0.43
CDC42SE1-206ENST00000492796 PNMA6FA0A0J9YX94 578 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 RARBP10826 455 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 ALDH5A1P51649 535 aaPredicted RBP12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 RPS6P62753 249 aaKnown RBP12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 FGD1P98174 961 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 ACVR2BQ13705 512 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 SLC35G1Q2M3R5 365 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 APOA5Q6Q788 366 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 MICU3Q86XE3 530 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 HOMER1Q86YM7 354 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 FBXL16Q8N461 479 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 SAMD3Q8N6K7 520 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 ARRDC4Q8NCT1 418 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 DNERQ8NFT8 737 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 MORC4Q8TE76 937 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 PAWRQ96IZ0 340 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms