RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 IQCA1Q86XH1 822 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 ANKRD35Q8N283 1001 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 FAM133AQ8N9E0 248 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 ESYT1Q9BSJ8 1104 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 KRT23Q9C075 422 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 FBXO40Q9UH90 709 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 B4E1Z4 1266 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 CTAGE5O15320 804 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 KDM4AO75164 1064 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 CLTBP09497 229 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 FDX1P10109 184 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 MCCP23508 829 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 STAT2P52630 851 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 CNTN2Q02246 1040 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 PTH1RQ03431 593 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 FAAP100Q0VG06 881 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 KCNA10Q16322 511 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 ARMCX2Q7L311 632 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 AGBL1Q96MI9 1066 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 TOX2Q96NM4 488 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 UBAC1Q9BSL1 405 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 ABHD16BQ9H3Z7 469 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 ZHX1Q9UKY1 873 aaPredicted RBP17.22■□□□□ 0.35
SS18L1-205ENST00000492466 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
SS18L1-205ENST00000492466 ASTN1O14525 1302 aa17.21■□□□□ 0.35
SS18L1-205ENST00000492466 MOXD2PA6NHM9 499 aa17.21■□□□□ 0.35
SS18L1-205ENST00000492466 PQBP1O60828 265 aaKnown RBP17.21■□□□□ 0.35
SS18L1-205ENST00000492466 CST5P28325 142 aaPredicted RBP17.21■□□□□ 0.35
SS18L1-205ENST00000492466 SLC1A4P43007 532 aa17.21■□□□□ 0.35
SS18L1-205ENST00000492466 NKX3-2P78367 333 aa17.21■□□□□ 0.35
SS18L1-205ENST00000492466 CCDC144BQ3MJ40 725 aa17.21■□□□□ 0.35
SS18L1-205ENST00000492466 CCDC144CPQ8IYA2 1237 aa17.21■□□□□ 0.35
SS18L1-205ENST00000492466 CHURC1Q8WUH1 139 aa17.21■□□□□ 0.35
SS18L1-205ENST00000492466 ZKSCAN3Q9BRR0 538 aa17.21■□□□□ 0.35
SS18L1-205ENST00000492466 UPF3AQ9H1J1 476 aaKnown RBP17.21■□□□□ 0.35
SS18L1-205ENST00000492466 A1CFQ9NQ94 594 aaKnown RBP17.21■□□□□ 0.35
SS18L1-205ENST00000492466 RBM8AQ9Y5S9 174 aaKnown RBP17.21■□□□□ 0.35
SS18L1-205ENST00000492466 SOWAHBA6NEL2 793 aa17.2■□□□□ 0.34
SS18L1-205ENST00000492466 TOP1P11387 765 aaKnown RBP17.2■□□□□ 0.34
SS18L1-205ENST00000492466 NT5C2P49902 561 aa17.2■□□□□ 0.34
SS18L1-205ENST00000492466 CDK7P50613 346 aa17.2■□□□□ 0.34
SS18L1-205ENST00000492466 GJA9P57773 515 aa17.2■□□□□ 0.34
SS18L1-205ENST00000492466 CCDC178Q5BJE1 867 aa17.2■□□□□ 0.34
SS18L1-205ENST00000492466 RCSD1Q6JBY9 416 aa17.2■□□□□ 0.34
SS18L1-205ENST00000492466 KCTD1Q719H9 257 aa17.2■□□□□ 0.34
SS18L1-205ENST00000492466 FAM160B2Q86V87 743 aa17.2■□□□□ 0.34
SS18L1-205ENST00000492466 STARD7Q9NQZ5 370 aa17.2■□□□□ 0.34
SS18L1-205ENST00000492466 HOMER2Q9NSB8 354 aa17.2■□□□□ 0.34
SS18L1-205ENST00000492466 MUC3AQ02505 3323 aa17.19■□□□□ 0.34
SS18L1-205ENST00000492466 DLL1O00548 723 aa17.19■□□□□ 0.34
SS18L1-205ENST00000492466 SNAP25P60880 206 aa17.19■□□□□ 0.34
SS18L1-205ENST00000492466 NUP133Q8WUM0 1156 aa17.19■□□□□ 0.34
SS18L1-205ENST00000492466 FAM161BQ96MY7 647 aa17.19■□□□□ 0.34
SS18L1-205ENST00000492466 ACAD9Q9H845 621 aa17.19■□□□□ 0.34
SS18L1-205ENST00000492466 RNF146Q9NTX7 359 aa17.19■□□□□ 0.34
SS18L1-205ENST00000492466 PRR12Q9ULL5 1215 aa17.19■□□□□ 0.34
SS18L1-205ENST00000492466 DDX49Q9Y6V7 483 aaKnown RBP17.19■□□□□ 0.34
SS18L1-205ENST00000492466 ERICH2A1L162 156 aa17.18■□□□□ 0.34
SS18L1-205ENST00000492466 ASGR1P07306 291 aa17.18■□□□□ 0.34
SS18L1-205ENST00000492466 MUM1L1Q5H9M0 696 aa17.18■□□□□ 0.34
SS18L1-205ENST00000492466 KAT14Q9H8E8 782 aa17.18■□□□□ 0.34
SS18L1-205ENST00000492466 TMEM39AQ9NV64 488 aa17.18■□□□□ 0.34
SS18L1-205ENST00000492466 TBX21Q9UL17 535 aa17.18■□□□□ 0.34
SS18L1-205ENST00000492466 ELP1O95163 1332 aa17.18■□□□□ 0.34
SS18L1-205ENST00000492466 MYH6P13533 1939 aa17.17■□□□□ 0.34
SS18L1-205ENST00000492466 CHD7Q9P2D1 2997 aa17.17■□□□□ 0.34
SS18L1-205ENST00000492466 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.17■□□□□ 0.34
SS18L1-205ENST00000492466 CYP21A2P08686 494 aa17.17■□□□□ 0.34
SS18L1-205ENST00000492466 C6orf222P0C671 652 aaPredicted RBP17.17■□□□□ 0.34
SS18L1-205ENST00000492466 RAG1P15918 1043 aa17.17■□□□□ 0.34
SS18L1-205ENST00000492466 SMAD3P84022 425 aaKnown RBP17.17■□□□□ 0.34
SS18L1-205ENST00000492466 SART3Q15020 963 aaKnown RBP17.17■□□□□ 0.34
SS18L1-205ENST00000492466 TKFCQ3LXA3 575 aa17.17■□□□□ 0.34
SS18L1-205ENST00000492466 RNF20Q5VTR2 975 aa17.17■□□□□ 0.34
SS18L1-205ENST00000492466 NCOA7Q8NI08 942 aa17.17■□□□□ 0.34
SS18L1-205ENST00000492466 DCAF4Q8WV16 495 aa17.17■□□□□ 0.34
SS18L1-205ENST00000492466 TRERF1Q96PN7 1200 aa17.17■□□□□ 0.34
SS18L1-205ENST00000492466 ZSCAN10Q96SZ4 725 aaPredicted RBP17.17■□□□□ 0.34
SS18L1-205ENST00000492466 TMEM47Q9BQJ4 181 aa17.17■□□□□ 0.34
SS18L1-205ENST00000492466 TTYH1Q9H313 450 aaPredicted RBP17.17■□□□□ 0.34
SS18L1-205ENST00000492466 SEMA6BQ9H3T3 888 aa17.17■□□□□ 0.34
SS18L1-205ENST00000492466 TCP11L1Q9NUJ3 509 aa17.17■□□□□ 0.34
SS18L1-205ENST00000492466 GNEQ9Y223 722 aaKnown RBP17.17■□□□□ 0.34
SS18L1-205ENST00000492466 TNKSO95271 1327 aa17.17■□□□□ 0.34
SS18L1-205ENST00000492466 LCTP09848 1927 aa17.16■□□□□ 0.34
SS18L1-205ENST00000492466 ALAS1P13196 640 aa17.16■□□□□ 0.34
SS18L1-205ENST00000492466 PTGS1P23219 599 aa17.16■□□□□ 0.34
SS18L1-205ENST00000492466 GNASQ5JWF2 1037 aa17.16■□□□□ 0.34
SS18L1-205ENST00000492466 ZNF697Q5TEC3 545 aa17.16■□□□□ 0.34
SS18L1-205ENST00000492466 TTBK2Q6IQ55 1244 aa17.16■□□□□ 0.34
SS18L1-205ENST00000492466 CCDC174Q6PII3 467 aa17.16■□□□□ 0.34
SS18L1-205ENST00000492466 BTNL9Q6UXG8 535 aa17.16■□□□□ 0.34
SS18L1-205ENST00000492466 PCSK9Q8NBP7 692 aaKnown RBP17.16■□□□□ 0.34
SS18L1-205ENST00000492466 MAP4K1Q92918 833 aa17.16■□□□□ 0.34
SS18L1-205ENST00000492466 GLT1D1Q96MS3 346 aa17.16■□□□□ 0.34
SS18L1-205ENST00000492466 PURBQ96QR8 312 aaKnown RBP17.16■□□□□ 0.34
SS18L1-205ENST00000492466 LSG1Q9H089 658 aaKnown RBP17.16■□□□□ 0.34
SS18L1-205ENST00000492466 CYP39A1Q9NYL5 469 aa17.16■□□□□ 0.34
SS18L1-205ENST00000492466 FRMPD2Q68DX3 1309 aaPredicted RBP17.16■□□□□ 0.34
SS18L1-205ENST00000492466 DCDC2CA8MYV0 355 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms