RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 CDC37Q16543 378 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-215ENST00000492451 MSL3Q8N5Y2 521 aaKnown RBP16.07■□□□□ 0.16
PTPN7-215ENST00000492451 DIS3LQ8TF46 1054 aaKnown RBP16.07■□□□□ 0.16
PTPN7-215ENST00000492451 LZTS2Q9BRK4 669 aa16.07■□□□□ 0.16
PTPN7-215ENST00000492451 LRRC2Q9BYS8 371 aa16.07■□□□□ 0.16
PTPN7-215ENST00000492451 CPVLQ9H3G5 476 aa16.07■□□□□ 0.16
PTPN7-215ENST00000492451 JMJD4Q9H9V9 463 aa16.07■□□□□ 0.16
PTPN7-215ENST00000492451 VAT1LQ9HCJ6 419 aa16.07■□□□□ 0.16
PTPN7-215ENST00000492451 FLRT1Q9NZU1 646 aa16.07■□□□□ 0.16
PTPN7-215ENST00000492451 IGHA2P01877 340 aa16.06■□□□□ 0.16
PTPN7-215ENST00000492451 TFRCP02786 760 aaKnown RBP16.06■□□□□ 0.16
PTPN7-215ENST00000492451 SMARCA1P28370 1054 aa16.06■□□□□ 0.16
PTPN7-215ENST00000492451 ZNF467Q7Z7K2 595 aaPredicted RBP16.06■□□□□ 0.16
PTPN7-215ENST00000492451 MAF1Q9H063 256 aa16.06■□□□□ 0.16
PTPN7-215ENST00000492451 A1CFQ9NQ94 594 aaKnown RBP16.06■□□□□ 0.16
PTPN7-215ENST00000492451 MYH6P13533 1939 aa16.06■□□□□ 0.16
PTPN7-215ENST00000492451 ABCB11O95342 1321 aa16.05■□□□□ 0.16
PTPN7-215ENST00000492451 POTEB2H3BUK9 544 aa16.05■□□□□ 0.16
PTPN7-215ENST00000492451 CYP2C19P33261 490 aa16.05■□□□□ 0.16
PTPN7-215ENST00000492451 QRICH1Q2TAL8 776 aa16.05■□□□□ 0.16
PTPN7-215ENST00000492451 MUM1L1Q5H9M0 696 aa16.05■□□□□ 0.16
PTPN7-215ENST00000492451 FBXO11Q86XK2 927 aa16.05■□□□□ 0.16
PTPN7-215ENST00000492451 MTMR8Q96EF0 704 aa16.05■□□□□ 0.16
PTPN7-215ENST00000492451 TINF2Q9BSI4 451 aa16.05■□□□□ 0.16
PTPN7-215ENST00000492451 TM6SF1Q9BZW5 370 aa16.05■□□□□ 0.16
PTPN7-215ENST00000492451 RIOX1Q9H6W3 641 aa16.05■□□□□ 0.16
PTPN7-215ENST00000492451 CYP39A1Q9NYL5 469 aa16.05■□□□□ 0.16
PTPN7-215ENST00000492451 NRBP1Q9UHY1 535 aa16.05■□□□□ 0.16
PTPN7-215ENST00000492451 ZBTB5O15062 677 aa16.04■□□□□ 0.16
PTPN7-215ENST00000492451 CASTP20810 708 aaKnown RBP16.04■□□□□ 0.16
PTPN7-215ENST00000492451 RPS6KB1P23443 525 aa16.04■□□□□ 0.16
PTPN7-215ENST00000492451 CCND3P30281 292 aaPredicted RBP16.04■□□□□ 0.16
PTPN7-215ENST00000492451 USH1GQ495M9 461 aa16.04■□□□□ 0.16
PTPN7-215ENST00000492451 APOA5Q6Q788 366 aa16.04■□□□□ 0.16
PTPN7-215ENST00000492451 NSMFQ6X4W1 530 aa16.04■□□□□ 0.16
PTPN7-215ENST00000492451 FBXL16Q8N461 479 aa16.04■□□□□ 0.16
PTPN7-215ENST00000492451 FANCBQ8NB91 859 aa16.04■□□□□ 0.16
PTPN7-215ENST00000492451 RGS22Q8NE09 1264 aa16.04■□□□□ 0.16
PTPN7-215ENST00000492451 PAWRQ96IZ0 340 aaKnown RBP16.04■□□□□ 0.16
PTPN7-215ENST00000492451 TCEANC2Q96MN5 208 aa16.04■□□□□ 0.16
PTPN7-215ENST00000492451 MYL10Q9BUA6 226 aa16.04■□□□□ 0.16
PTPN7-215ENST00000492451 SPZ1Q9BXG8 430 aa16.04■□□□□ 0.16
PTPN7-215ENST00000492451 AMNQ9BXJ7 453 aa16.04■□□□□ 0.16
PTPN7-215ENST00000492451 SMCHD1A6NHR9 2005 aa16.04■□□□□ 0.16
PTPN7-215ENST00000492451 SYNGAP1Q96PV0 1343 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 ZBTB43O43298 467 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 MSCO60682 206 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 RCAN1P53805 252 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 ANAPC15P60006 121 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 MAMDC4Q6UXC1 1216 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 RUFY3Q7L099 469 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 MCF2L2Q86YR7 1114 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 FAM133AQ8N9E0 248 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 CLEC4DQ8WXI8 215 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 DPF3Q92784 378 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 ZSWIM6Q9HCJ5 1215 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 MRPL11Q9Y3B7 192 aaKnown RBP16.03■□□□□ 0.16
PTPN7-215ENST00000492451 GTF3C3Q9Y5Q9 886 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 CYP46A1Q9Y6A2 500 aa16.03■□□□□ 0.16
PTPN7-215ENST00000492451 PNMA6FA0A0J9YX94 578 aa16.02■□□□□ 0.16
PTPN7-215ENST00000492451 KLF18A0A0U1RQI7 1052 aa16.02■□□□□ 0.16
PTPN7-215ENST00000492451 NFIBO00712 420 aa16.02■□□□□ 0.16
PTPN7-215ENST00000492451 CYBAP13498 195 aa16.02■□□□□ 0.16
PTPN7-215ENST00000492451 CPA1P15085 419 aa16.02■□□□□ 0.16
PTPN7-215ENST00000492451 CNGA1P29973 690 aa16.02■□□□□ 0.16
PTPN7-215ENST00000492451 CNTN2Q02246 1040 aa16.02■□□□□ 0.16
PTPN7-215ENST00000492451 BAATQ14032 418 aaPredicted RBP16.02■□□□□ 0.16
PTPN7-215ENST00000492451 PPP2R5BQ15173 497 aa16.02■□□□□ 0.16
PTPN7-215ENST00000492451 HABP4Q5JVS0 413 aaKnown RBP16.02■□□□□ 0.16
PTPN7-215ENST00000492451 RNF207Q6ZRF8 634 aa16.02■□□□□ 0.16
PTPN7-215ENST00000492451 Q6ZUG5 572 aa16.02■□□□□ 0.16
PTPN7-215ENST00000492451 MICU3Q86XE3 530 aa16.02■□□□□ 0.16
PTPN7-215ENST00000492451 HOMER1Q86YM7 354 aa16.02■□□□□ 0.16
PTPN7-215ENST00000492451 RRP36Q96EU6 259 aaKnown RBP16.02■□□□□ 0.16
PTPN7-215ENST00000492451 RBM28Q9NW13 759 aaKnown RBP16.02■□□□□ 0.16
PTPN7-215ENST00000492451 ADD3Q9UEY8 706 aaKnown RBP16.02■□□□□ 0.16
PTPN7-215ENST00000492451 COLQQ9Y215 455 aaPredicted RBP16.02■□□□□ 0.16
PTPN7-215ENST00000492451 CNPY2Q9Y2B0 182 aa16.02■□□□□ 0.16
PTPN7-215ENST00000492451 CEP290O15078 2479 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 LOC102724159A0A0B4J2E5 919 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 PTPDC1A2A3K4 754 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 ASB14A6NK59 587 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 CYTH3O43739 400 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 TAL1P17542 331 aaPredicted RBP16.01■□□□□ 0.15
PTPN7-215ENST00000492451 RXRAP19793 462 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 PWP2Q15269 919 aaKnown RBP16.01■□□□□ 0.15
PTPN7-215ENST00000492451 LHX8Q68G74 356 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 CCDC144CPQ8IYA2 1237 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 TRPV1Q8NER1 839 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 BRF1Q92994 677 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 PIGSQ96S52 555 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 AGXT2Q9BYV1 514 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 PCDH10Q9P2E7 1040 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 SEC63Q9UGP8 760 aaKnown RBP16.01■□□□□ 0.15
PTPN7-215ENST00000492451 OGDHLQ9ULD0 1010 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 BRPF3Q9ULD4 1205 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 PCDHA1Q9Y5I3 950 aa16.01■□□□□ 0.15
PTPN7-215ENST00000492451 BAZ2BQ9UIF8 2168 aaKnown RBP16■□□□□ 0.15
PTPN7-215ENST00000492451 CCDC196A0A1B0GTZ2 297 aa16■□□□□ 0.15
PTPN7-215ENST00000492451 SOWAHBA6NEL2 793 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms