RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 CYP39A1Q9NYL5 469 aa17.69■□□□□ 0.42
SS18L1-204ENST00000491916 MYH6P13533 1939 aa17.68■□□□□ 0.42
SS18L1-204ENST00000491916 CCDC69A6NI79 296 aa17.68■□□□□ 0.42
SS18L1-204ENST00000491916 PLEKHA8P1O95397 391 aa17.68■□□□□ 0.42
SS18L1-204ENST00000491916 GJB1P08034 283 aa17.68■□□□□ 0.42
SS18L1-204ENST00000491916 CASTP20810 708 aaKnown RBP17.68■□□□□ 0.42
SS18L1-204ENST00000491916 CCND3P30281 292 aaPredicted RBP17.68■□□□□ 0.42
SS18L1-204ENST00000491916 BLOC1S2Q6QNY1 142 aa17.68■□□□□ 0.42
SS18L1-204ENST00000491916 NFXL1Q6ZNB6 911 aa17.68■□□□□ 0.42
SS18L1-204ENST00000491916 DNAH12Q6ZR08 3092 aa17.68■□□□□ 0.42
SS18L1-204ENST00000491916 Q6ZUG5 572 aa17.68■□□□□ 0.42
SS18L1-204ENST00000491916 SRBD1Q8N5C6 995 aaKnown RBP17.68■□□□□ 0.42
SS18L1-204ENST00000491916 TM6SF1Q9BZW5 370 aa17.68■□□□□ 0.42
SS18L1-204ENST00000491916 RNF208Q9H0X6 261 aa17.68■□□□□ 0.42
SS18L1-204ENST00000491916 GTF3C3Q9Y5Q9 886 aa17.68■□□□□ 0.42
SS18L1-204ENST00000491916 RPTORQ8N122 1335 aa17.68■□□□□ 0.42
SS18L1-204ENST00000491916 SOWAHBA6NEL2 793 aa17.67■□□□□ 0.42
SS18L1-204ENST00000491916 OPLAHO14841 1288 aa17.67■□□□□ 0.42
SS18L1-204ENST00000491916 CYBAP13498 195 aa17.67■□□□□ 0.42
SS18L1-204ENST00000491916 MAMDC4Q6UXC1 1216 aa17.67■□□□□ 0.42
SS18L1-204ENST00000491916 RUFY3Q7L099 469 aa17.67■□□□□ 0.42
SS18L1-204ENST00000491916 ANKRD35Q8N283 1001 aa17.67■□□□□ 0.42
SS18L1-204ENST00000491916 FANCBQ8NB91 859 aa17.67■□□□□ 0.42
SS18L1-204ENST00000491916 TBC1D5Q92609 795 aa17.67■□□□□ 0.42
SS18L1-204ENST00000491916 DDX11Q96FC9 970 aa17.67■□□□□ 0.42
SS18L1-204ENST00000491916 PURBQ96QR8 312 aaKnown RBP17.67■□□□□ 0.42
SS18L1-204ENST00000491916 PIGSQ96S52 555 aa17.67■□□□□ 0.42
SS18L1-204ENST00000491916 SPZ1Q9BXG8 430 aa17.67■□□□□ 0.42
SS18L1-204ENST00000491916 CRISPLD2Q9H0B8 497 aa17.67■□□□□ 0.42
SS18L1-204ENST00000491916 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.67■□□□□ 0.428e-6■■□□□ 13.3
SS18L1-204ENST00000491916 SLC12A7Q9Y666 1083 aa17.67■□□□□ 0.42
SS18L1-204ENST00000491916 MCM3APO60318 1980 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 ZBTB5O15062 677 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 SNAI1O95863 264 aaPredicted RBP17.66■□□□□ 0.42
SS18L1-204ENST00000491916 PSMA5P28066 241 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 SMARCA1P28370 1054 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 GJA8P48165 433 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 EVCP57679 992 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 FUT2Q10981 343 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 TOB2Q14106 344 aaPredicted RBP17.66■□□□□ 0.42
SS18L1-204ENST00000491916 PRAMEF19Q5SWL8 479 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 MFSD14CQ5VZR4 134 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 LHX8Q68G74 356 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 ZNF467Q7Z7K2 595 aaPredicted RBP17.66■□□□□ 0.42
SS18L1-204ENST00000491916 CCDC144CPQ8IYA2 1237 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 CMTR1Q8N1G2 835 aaKnown RBP17.66■□□□□ 0.42
SS18L1-204ENST00000491916 TINF2Q9BSI4 451 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 SLC5A4Q9NY91 659 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 PNMA2Q9UL42 364 aa17.66■□□□□ 0.42
SS18L1-204ENST00000491916 CALM1P0DP23 149 aa17.65■□□□□ 0.42
SS18L1-204ENST00000491916 CALM2P0DP24 149 aa17.65■□□□□ 0.42
SS18L1-204ENST00000491916 CALM3P0DP25 149 aa17.65■□□□□ 0.42
SS18L1-204ENST00000491916 APOBRQ0VD83 1088 aa17.65■□□□□ 0.42
SS18L1-204ENST00000491916 BAATQ14032 418 aaPredicted RBP17.65■□□□□ 0.42
SS18L1-204ENST00000491916 USH1GQ495M9 461 aa17.65■□□□□ 0.42
SS18L1-204ENST00000491916 TMTC3Q6ZXV5 915 aa17.65■□□□□ 0.42
SS18L1-204ENST00000491916 MICU3Q86XE3 530 aa17.65■□□□□ 0.42
SS18L1-204ENST00000491916 FBXO11Q86XK2 927 aa17.65■□□□□ 0.42
SS18L1-204ENST00000491916 RGS22Q8NE09 1264 aa17.65■□□□□ 0.42
SS18L1-204ENST00000491916 CTCFLQ8NI51 663 aaPredicted RBP17.65■□□□□ 0.42
SS18L1-204ENST00000491916 BRF1Q92994 677 aa17.65■□□□□ 0.42
SS18L1-204ENST00000491916 TMEM106CQ9BVX2 250 aa17.65■□□□□ 0.42
SS18L1-204ENST00000491916 HMX1Q9NP08 348 aaPredicted RBP17.65■□□□□ 0.42
SS18L1-204ENST00000491916 DDX49Q9Y6V7 483 aaKnown RBP17.65■□□□□ 0.42
SS18L1-204ENST00000491916 PFASO15067 1338 aa17.65■□□□□ 0.42
SS18L1-204ENST00000491916 KLF18A0A0U1RQI7 1052 aa17.64■□□□□ 0.41
SS18L1-204ENST00000491916 POTEB2H3BUK9 544 aa17.64■□□□□ 0.41
SS18L1-204ENST00000491916 SGPL1O95470 568 aa17.64■□□□□ 0.41
SS18L1-204ENST00000491916 CDC27P30260 824 aa17.64■□□□□ 0.41
SS18L1-204ENST00000491916 KIF5BP33176 963 aa17.64■□□□□ 0.41
SS18L1-204ENST00000491916 MNX1P50219 401 aaPredicted RBP17.64■□□□□ 0.41
SS18L1-204ENST00000491916 ANAPC15P60006 121 aa17.64■□□□□ 0.41
SS18L1-204ENST00000491916 NSMFQ6X4W1 530 aa17.64■□□□□ 0.41
SS18L1-204ENST00000491916 SLC30A10Q6XR72 485 aa17.64■□□□□ 0.41
SS18L1-204ENST00000491916 UBE2Q1Q7Z7E8 422 aa17.64■□□□□ 0.41
SS18L1-204ENST00000491916 MSL3Q8N5Y2 521 aaKnown RBP17.64■□□□□ 0.41
SS18L1-204ENST00000491916 U2AF1L4Q8WU68 220 aaKnown RBP17.64■□□□□ 0.41
SS18L1-204ENST00000491916 DEFB118Q96PH6 123 aa17.64■□□□□ 0.41
SS18L1-204ENST00000491916 UPF3BQ9BZI7 483 aaKnown RBP17.64■□□□□ 0.41
SS18L1-204ENST00000491916 KATNBL1Q9H079 304 aa17.64■□□□□ 0.41
SS18L1-204ENST00000491916 ABCB11O95342 1321 aa17.64■□□□□ 0.41
SS18L1-204ENST00000491916 NID2Q14112 1375 aa17.64■□□□□ 0.41
SS18L1-204ENST00000491916 PNMA6FA0A0J9YX94 578 aa17.63■□□□□ 0.41
SS18L1-204ENST00000491916 ZBTB43O43298 467 aa17.63■□□□□ 0.41
SS18L1-204ENST00000491916 DHX16O60231 1041 aaKnown RBP17.63■□□□□ 0.41
SS18L1-204ENST00000491916 ZNF865P0CJ78 1059 aaPredicted RBP17.63■□□□□ 0.41
SS18L1-204ENST00000491916 GNAQP50148 359 aa17.63■□□□□ 0.41
SS18L1-204ENST00000491916 RCAN1P53805 252 aa17.63■□□□□ 0.41
SS18L1-204ENST00000491916 RPS6P62753 249 aaKnown RBP17.63■□□□□ 0.41
SS18L1-204ENST00000491916 GHRHRQ02643 423 aa17.63■□□□□ 0.41
SS18L1-204ENST00000491916 LZTS2Q9BRK4 669 aa17.63■□□□□ 0.41
SS18L1-204ENST00000491916 AMNQ9BXJ7 453 aa17.63■□□□□ 0.41
SS18L1-204ENST00000491916 COL20A1Q9P218 1284 aa17.63■□□□□ 0.41
SS18L1-204ENST00000491916 CYP46A1Q9Y6A2 500 aa17.63■□□□□ 0.41
SS18L1-204ENST00000491916 SYNGAP1Q96PV0 1343 aa17.63■□□□□ 0.41
SS18L1-204ENST00000491916 HOMER1Q86YM7 354 aa17.62■□□□□ 0.41
SS18L1-204ENST00000491916 MORC4Q8TE76 937 aa17.62■□□□□ 0.41
SS18L1-204ENST00000491916 NRBP1Q9UHY1 535 aa17.62■□□□□ 0.41
SS18L1-204ENST00000491916 PCDHA1Q9Y5I3 950 aa17.62■□□□□ 0.41
SS18L1-204ENST00000491916 FRMPD3Q5JV73 1810 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms