RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 RANBP17Q9H2T7 1088 aaKnown RBP10.88□□□□□ -0.67
BRCA1-219ENST00000491747 TSPY26PQ9H489 355 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 BIN2Q9UBW5 565 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-219ENST00000491747 IGHA2P01877 340 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 PGK2P07205 417 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 CCL5P13501 91 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 HSPA4P34932 840 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 WTAPQ15007 396 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 TMEM67Q5HYA8 995 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 FOXD4L5Q5VV16 416 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-219ENST00000491747 FOXD4L4Q8WXT5 416 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-219ENST00000491747 APBA2Q99767 749 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 LRRC2Q9BYS8 371 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 LY9Q9HBG7 655 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 HOXC6P09630 235 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 FDX1P10109 184 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 FCER1AP12319 257 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 OAZ1P54368 228 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 MTERF4Q7Z6M4 381 aaKnown RBP10.87□□□□□ -0.67
BRCA1-219ENST00000491747 IL17RAQ96F46 866 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 MMP19Q99542 508 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 MAD2L2Q9UI95 211 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 CTDP1Q9Y5B0 961 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-219ENST00000491747 SNX14Q9Y5W7 946 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 UQCRHLA0A096LP55 91 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 SH2B2O14492 632 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-219ENST00000491747 HMGCRP04035 888 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 UQCRHP07919 91 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 EN2P19622 333 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-219ENST00000491747 SLC35G1Q2M3R5 365 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 MUM1L1Q5H9M0 696 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 GPATCH4Q5T3I0 446 aaKnown RBP10.87□□□□□ -0.67
BRCA1-219ENST00000491747 RNF20Q5VTR2 975 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 DPP9Q86TI2 863 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 ABRAQ8N0Z2 381 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 FAM184AQ8NB25 1140 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 RNF214Q8ND24 703 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 TCEANC2Q96MN5 208 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 NEK1Q96PY6 1258 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 HOMER2Q9NSB8 354 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 FRMPD3Q5JV73 1810 aa10.87□□□□□ -0.67
BRCA1-219ENST00000491747 ERICH2A1L162 156 aa10.86□□□□□ -0.67
BRCA1-219ENST00000491747 PTMAP06454 111 aaKnown RBP10.86□□□□□ -0.67
BRCA1-219ENST00000491747 PARP1P09874 1014 aaKnown RBP10.86□□□□□ -0.67
BRCA1-219ENST00000491747 CPA1P15085 419 aa10.86□□□□□ -0.67
BRCA1-219ENST00000491747 RGS19P49795 217 aa10.86□□□□□ -0.67
BRCA1-219ENST00000491747 UBXN2AP68543 259 aa10.86□□□□□ -0.67
BRCA1-219ENST00000491747 EXOSC10Q01780 885 aaKnown RBP10.86□□□□□ -0.67
BRCA1-219ENST00000491747 CACNB2Q08289 660 aaPredicted RBP10.86□□□□□ -0.67
BRCA1-219ENST00000491747 TROAPQ12815 778 aa10.86□□□□□ -0.67
BRCA1-219ENST00000491747 MAP3K21Q5TCX8 1036 aa10.86□□□□□ -0.67
BRCA1-219ENST00000491747 ADGRF4Q8IZF3 695 aa10.86□□□□□ -0.67
BRCA1-219ENST00000491747 CHAMP1Q96JM3 812 aa10.86□□□□□ -0.67
BRCA1-219ENST00000491747 MYL10Q9BUA6 226 aa10.86□□□□□ -0.67
BRCA1-219ENST00000491747 PALM3A6NDB9 673 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-219ENST00000491747 DYNC1I1O14576 645 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 ICAM1P05362 532 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 ALAS1P13196 640 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 ZKSCAN1P17029 563 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-219ENST00000491747 COPB2P35606 906 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 GRM4Q14833 912 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 ZNF792Q3KQV3 632 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 ASPRV1Q53RT3 343 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.85□□□□□ -0.67
BRCA1-219ENST00000491747 TRERF1Q96PN7 1200 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 RNF208Q9H0X6 261 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 MCM3APO60318 1980 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 TNRC18O15417 2968 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-219ENST00000491747 BAZ2BQ9UIF8 2168 aaKnown RBP10.85□□□□□ -0.67
BRCA1-219ENST00000491747 DNAJC25-GNG10A0A024R161 153 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 PRKAR2AP13861 404 aaKnown RBP10.85□□□□□ -0.67
BRCA1-219ENST00000491747 CCND3P30281 292 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-219ENST00000491747 CYP2C19P33261 490 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 KCTD2Q14681 263 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 SART3Q15020 963 aaKnown RBP10.85□□□□□ -0.67
BRCA1-219ENST00000491747 CHST13Q8NET6 341 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 SHISA4Q96DD7 197 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 MAML3Q96JK9 1138 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 TMEM87BQ96K49 555 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 TMEM106CQ9BVX2 250 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 JMJD4Q9H9V9 463 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 VAT1LQ9HCJ6 419 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 RNF146Q9NTX7 359 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 FAM13BQ9NYF5 915 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 CCPG1Q9ULG6 757 aa10.85□□□□□ -0.67
BRCA1-219ENST00000491747 KLRF2D3W0D1 207 aa10.84□□□□□ -0.67
BRCA1-219ENST00000491747 SASS6Q6UVJ0 657 aa10.84□□□□□ -0.67
BRCA1-219ENST00000491747 RAB11FIP4Q86YS3 637 aa10.84□□□□□ -0.67
BRCA1-219ENST00000491747 TRMT44Q8IYL2 757 aaKnown RBP10.84□□□□□ -0.67
BRCA1-219ENST00000491747 ZNF654Q8IZM8 581 aa10.84□□□□□ -0.67
BRCA1-219ENST00000491747 TRPV1Q8NER1 839 aa10.84□□□□□ -0.67
BRCA1-219ENST00000491747 FGD4Q96M96 766 aa10.84□□□□□ -0.67
BRCA1-219ENST00000491747 MTA3Q9BTC8 594 aa10.84□□□□□ -0.67
BRCA1-219ENST00000491747 PAK6Q9NQU5 681 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-219ENST00000491747 KIAA0100Q14667 2235 aaKnown RBP10.84□□□□□ -0.67
BRCA1-219ENST00000491747 RXRAP19793 462 aa10.84□□□□□ -0.67
BRCA1-219ENST00000491747 RBM10P98175 930 aaKnown RBP10.84□□□□□ -0.67
BRCA1-219ENST00000491747 UVSSAQ2YD98 709 aa10.84□□□□□ -0.67
BRCA1-219ENST00000491747 OLFML2BQ68BL8 750 aa10.84□□□□□ -0.67
BRCA1-219ENST00000491747 NOL8Q76FK4 1167 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms