RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 TRAF1Q13077 416 aa25■■□□□ 1.59
VCPKMT-204ENST00000491402 MCTP1Q6DN14 999 aa25■■□□□ 1.59
VCPKMT-204ENST00000491402 POTEEQ6S8J3 1075 aa25■■□□□ 1.59
VCPKMT-204ENST00000491402 AGBL1Q96MI9 1066 aa25■■□□□ 1.59
VCPKMT-204ENST00000491402 RAVER2Q9HCJ3 691 aaKnown RBP25■■□□□ 1.59
VCPKMT-204ENST00000491402 ZNF214Q9UL59 606 aaPredicted RBP25■■□□□ 1.59
VCPKMT-204ENST00000491402 CCPG1Q9ULG6 757 aa25■■□□□ 1.59
VCPKMT-204ENST00000491402 ESYT2A0FGR8 921 aa24.99■■□□□ 1.59
VCPKMT-204ENST00000491402 TBC1D8O95759 1140 aa24.99■■□□□ 1.59
VCPKMT-204ENST00000491402 CALML3P27482 149 aa24.99■■□□□ 1.59
VCPKMT-204ENST00000491402 OAZ1P54368 228 aa24.99■■□□□ 1.59
VCPKMT-204ENST00000491402 CRHR2Q13324 411 aa24.99■■□□□ 1.59
VCPKMT-204ENST00000491402 TMEM132BQ14DG7 1078 aa24.99■■□□□ 1.59
VCPKMT-204ENST00000491402 SAFBQ15424 915 aaKnown RBP eCLIP24.99■■□□□ 1.59
VCPKMT-204ENST00000491402 FERMT3Q86UX7 667 aa24.99■■□□□ 1.59
VCPKMT-204ENST00000491402 MB21D1Q8N884 522 aa24.99■■□□□ 1.59
VCPKMT-204ENST00000491402 R3HDMLQ9H3Y0 253 aa24.99■■□□□ 1.59
VCPKMT-204ENST00000491402 SMCO2A6NFE2 343 aa24.98■■□□□ 1.59
VCPKMT-204ENST00000491402 CA12O43570 354 aa24.98■■□□□ 1.59
VCPKMT-204ENST00000491402 F13A1P00488 732 aa24.98■■□□□ 1.59
VCPKMT-204ENST00000491402 DIS3L2Q8IYB7 885 aaKnown RBP24.98■■□□□ 1.59
VCPKMT-204ENST00000491402 PARK7Q99497 189 aaKnown RBP24.98■■□□□ 1.59
VCPKMT-204ENST00000491402 ATP2A1O14983 1001 aa24.98■■□□□ 1.59
VCPKMT-204ENST00000491402 GALNT17Q6IS24 598 aa24.98■■□□□ 1.59
VCPKMT-204ENST00000491402 SMCR8Q8TEV9 937 aaPredicted RBP24.98■■□□□ 1.59
VCPKMT-204ENST00000491402 ZFYVE28Q9HCC9 887 aa24.98■■□□□ 1.59
VCPKMT-204ENST00000491402 BRMS1Q9HCU9 246 aa24.98■■□□□ 1.59
VCPKMT-204ENST00000491402 PNMA2Q9UL42 364 aa24.98■■□□□ 1.59
VCPKMT-204ENST00000491402 PCDHA4Q9UN74 947 aa24.98■■□□□ 1.59
VCPKMT-204ENST00000491402 BTBD18B2RXH4 712 aa24.97■■□□□ 1.59
VCPKMT-204ENST00000491402 GNA11P29992 359 aa24.97■■□□□ 1.59
VCPKMT-204ENST00000491402 KRT2P35908 639 aa24.97■■□□□ 1.59
VCPKMT-204ENST00000491402 OXER1Q8TDS5 423 aa24.97■■□□□ 1.59
VCPKMT-204ENST00000491402 C6orf50Q9HD87 102 aa24.97■■□□□ 1.59
VCPKMT-204ENST00000491402 ABCB11O95342 1321 aa24.97■■□□□ 1.59
VCPKMT-204ENST00000491402 KIF28PB7ZC32 967 aa24.96■■□□□ 1.59
VCPKMT-204ENST00000491402 RESTQ13127 1097 aa24.96■■□□□ 1.59
VCPKMT-204ENST00000491402 BLIDQ8IZY5 108 aa24.96■■□□□ 1.59
VCPKMT-204ENST00000491402 DAGLBQ8NCG7 672 aa24.96■■□□□ 1.59
VCPKMT-204ENST00000491402 TEX13BQ9BXU2 312 aa24.96■■□□□ 1.59
VCPKMT-204ENST00000491402 BTBD7Q9P203 1132 aa24.96■■□□□ 1.59
VCPKMT-204ENST00000491402 ADAMTS3O15072 1205 aa24.95■■□□□ 1.59
VCPKMT-204ENST00000491402 U2AF2P26368 475 aaKnown RBP eCLIP24.95■■□□□ 1.59
VCPKMT-204ENST00000491402 ADCY7P51828 1080 aa24.95■■□□□ 1.59
VCPKMT-204ENST00000491402 NR5A1Q13285 461 aa24.95■■□□□ 1.59
VCPKMT-204ENST00000491402 GNL2Q13823 731 aaKnown RBP24.95■■□□□ 1.59
VCPKMT-204ENST00000491402 SNRNP48Q6IEG0 339 aaKnown RBP24.95■■□□□ 1.59
VCPKMT-204ENST00000491402 FOXP1Q9H334 677 aaPredicted RBP24.95■■□□□ 1.59
VCPKMT-204ENST00000491402 PSTPIP2Q9H939 334 aa24.95■■□□□ 1.59
VCPKMT-204ENST00000491402 RIC8AQ9NPQ8 531 aa24.95■■□□□ 1.59
VCPKMT-204ENST00000491402 TSKSQ9UJT2 592 aa24.95■■□□□ 1.59
VCPKMT-204ENST00000491402 RBBP6Q7Z6E9 1792 aaKnown RBP24.95■■□□□ 1.59
VCPKMT-204ENST00000491402 MYH15Q9Y2K3 1946 aa24.95■■□□□ 1.58
VCPKMT-204ENST00000491402 OPLAHO14841 1288 aa24.95■■□□□ 1.58
VCPKMT-204ENST00000491402 PLS1Q14651 629 aa24.95■■□□□ 1.58
VCPKMT-204ENST00000491402 GTF3C2Q8WUA4 911 aaPredicted RBP24.95■■□□□ 1.58
VCPKMT-204ENST00000491402 CUL5Q93034 780 aa24.95■■□□□ 1.58
VCPKMT-204ENST00000491402 PAGR1Q9BTK6 254 aa24.95■■□□□ 1.58
VCPKMT-204ENST00000491402 ZSCAN16Q9H4T2 348 aaPredicted RBP24.95■■□□□ 1.58
VCPKMT-204ENST00000491402 MRPL11Q9Y3B7 192 aaKnown RBP24.95■■□□□ 1.58
VCPKMT-204ENST00000491402 TLR2O60603 784 aa24.94■■□□□ 1.58
VCPKMT-204ENST00000491402 PEX10O60683 326 aa24.94■■□□□ 1.58
VCPKMT-204ENST00000491402 ALAS1P13196 640 aa24.94■■□□□ 1.58
VCPKMT-204ENST00000491402 BICD2Q8TD16 824 aa24.94■■□□□ 1.58
VCPKMT-204ENST00000491402 SAGE1Q9NXZ1 904 aa24.94■■□□□ 1.58
VCPKMT-204ENST00000491402 CPA4Q9UI42 421 aa24.94■■□□□ 1.58
VCPKMT-204ENST00000491402 M0R2N6 131 aa24.93■■□□□ 1.58
VCPKMT-204ENST00000491402 CNMDO75829 334 aa24.93■■□□□ 1.58
VCPKMT-204ENST00000491402 STAT3P40763 770 aa24.93■■□□□ 1.58
VCPKMT-204ENST00000491402 TXNRD2Q9NNW7 524 aa24.93■■□□□ 1.58
VCPKMT-204ENST00000491402 HOMER2Q9NSB8 354 aa24.93■■□□□ 1.58
VCPKMT-204ENST00000491402 RBPJLQ9UBG7 517 aa24.93■■□□□ 1.58
VCPKMT-204ENST00000491402 RABGAP1Q9Y3P9 1069 aa24.93■■□□□ 1.58
VCPKMT-204ENST00000491402 RIPK3Q9Y572 518 aa24.93■■□□□ 1.58
VCPKMT-204ENST00000491402 MRPL12P52815 198 aaKnown RBP24.93■■□□□ 1.58
VCPKMT-204ENST00000491402 NOSTRINQ8IVI9 506 aa24.93■■□□□ 1.58
VCPKMT-204ENST00000491402 TNFRSF25Q93038 417 aa24.93■■□□□ 1.58
VCPKMT-204ENST00000491402 CFHR5Q9BXR6 569 aa24.93■■□□□ 1.58
VCPKMT-204ENST00000491402 GLT8D2Q9H1C3 349 aa24.93■■□□□ 1.58
VCPKMT-204ENST00000491402 BRAPQ7Z569 592 aa24.92■■□□□ 1.58
VCPKMT-204ENST00000491402 REXO1Q8N1G1 1221 aaKnown RBP24.92■■□□□ 1.58
VCPKMT-204ENST00000491402 RASGRP4Q8TDF6 673 aa24.92■■□□□ 1.58
VCPKMT-204ENST00000491402 CLEC4DQ8WXI8 215 aa24.92■■□□□ 1.58
VCPKMT-204ENST00000491402 TNPO1Q92973 898 aaKnown RBP24.92■■□□□ 1.58
VCPKMT-204ENST00000491402 SPATC1LQ9H0A9 340 aa24.92■■□□□ 1.58
VCPKMT-204ENST00000491402 ADGRA2Q96PE1 1338 aa24.92■■□□□ 1.58
VCPKMT-204ENST00000491402 ANKRD13CQ8N6S4 541 aa24.91■■□□□ 1.58
VCPKMT-204ENST00000491402 TRERF1Q96PN7 1200 aa24.91■■□□□ 1.58
VCPKMT-204ENST00000491402 RNF146Q9NTX7 359 aa24.91■■□□□ 1.58
VCPKMT-204ENST00000491402 PCDHA6Q9UN73 950 aa24.91■■□□□ 1.58
VCPKMT-204ENST00000491402 PCDHA8Q9Y5H6 950 aa24.91■■□□□ 1.58
VCPKMT-204ENST00000491402 NFIBO00712 420 aa24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 MEIS2O14770 477 aa24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 GCLCP48506 637 aaPredicted RBP24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 UBE2SQ16763 222 aa24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 MUM1L1Q5H9M0 696 aa24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 C17orf99Q6UX52 265 aa24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 ATP6V1DQ9Y5K8 247 aa24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 TCHHQ07283 1943 aa24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 CLK2P49760 499 aaKnown RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms