RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 POTEGQ6S5H5 508 aa10.13□□□□□ -0.79
HPS4-215ENST00000491142 CWC27Q6UX04 472 aaKnown RBP10.13□□□□□ -0.79
HPS4-215ENST00000491142 ZNF365Q70YC5 407 aa10.13□□□□□ -0.79
HPS4-215ENST00000491142 FAM122AQ96E09 287 aa10.13□□□□□ -0.79
HPS4-215ENST00000491142 TMX3Q96JJ7 454 aa10.13□□□□□ -0.79
HPS4-215ENST00000491142 NECAB3Q96P71 396 aaPredicted RBP10.13□□□□□ -0.79
HPS4-215ENST00000491142 CRNKL1Q9BZJ0 848 aaKnown RBP10.13□□□□□ -0.79
HPS4-215ENST00000491142 TM6SF1Q9BZW5 370 aa10.13□□□□□ -0.79
HPS4-215ENST00000491142 ARHGEF10LQ9HCE6 1279 aa10.13□□□□□ -0.79
HPS4-215ENST00000491142 DCP1AQ9NPI6 582 aaPredicted RBP10.13□□□□□ -0.79
HPS4-215ENST00000491142 CNPY2Q9Y2B0 182 aa10.13□□□□□ -0.79
HPS4-215ENST00000491142 SNX14Q9Y5W7 946 aa10.13□□□□□ -0.79
HPS4-215ENST00000491142 ROBO3Q96MS0 1386 aa10.13□□□□□ -0.79
HPS4-215ENST00000491142 CCDC171Q6TFL3 1326 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 MOXD2PA6NHM9 499 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 VWA5AO00534 786 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 WDR46O15213 610 aaKnown RBP10.12□□□□□ -0.79
HPS4-215ENST00000491142 TRAK2O60296 914 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 STAT3P40763 770 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 ICA1Q05084 483 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 PPIGQ13427 754 aaKnown RBP eCLIP10.12□□□□□ -0.79
HPS4-215ENST00000491142 SLC9C2Q5TAH2 1124 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 LCORLQ8N3X6 602 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 REPS2Q8NFH8 660 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 TTC14Q96N46 770 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 PPP1R12CQ9BZL4 782 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 NKX2-4Q9H2Z4 354 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 SWAP70Q9UH65 585 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 ZNF214Q9UL59 606 aaPredicted RBP10.12□□□□□ -0.79
HPS4-215ENST00000491142 FAM184BQ9ULE4 1060 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 PLXNA1Q9UIW2 1896 aa10.12□□□□□ -0.79
HPS4-215ENST00000491142 ZNF532Q9HCE3 1301 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 BDP1A6H8Y1 2624 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 CYP2D7A0A087X1C5 515 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 ADCY6O43306 1168 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 PRKAB2O43741 272 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 BAG4O95429 457 aaKnown RBP10.11□□□□□ -0.79
HPS4-215ENST00000491142 ASGR1P07306 291 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 EEF2P13639 858 aaKnown RBP10.11□□□□□ -0.79
HPS4-215ENST00000491142 PDE6AP16499 860 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 CYP2C18P33260 490 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 NECTIN1Q15223 517 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 CCDC174Q6PII3 467 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 TMED8Q6PL24 325 aaPredicted RBP10.11□□□□□ -0.79
HPS4-215ENST00000491142 TMEM199Q8N511 208 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 VTI1AQ96AJ9 217 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 GLT1D1Q96MS3 346 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 HAUS7Q99871 368 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 SH2D4AQ9H788 454 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 ARMT1Q9H993 441 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 CXXC1Q9P0U4 656 aaPredicted RBP10.11□□□□□ -0.79
HPS4-215ENST00000491142 MSRAQ9UJ68 235 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 ZHX1Q9UKY1 873 aaPredicted RBP10.11□□□□□ -0.79
HPS4-215ENST00000491142 PPP1R9AQ9ULJ8 1098 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 YBX2Q9Y2T7 364 aaKnown RBP10.11□□□□□ -0.79
HPS4-215ENST00000491142 RIPK3Q9Y572 518 aa10.11□□□□□ -0.79
HPS4-215ENST00000491142 NAV1Q8NEY1 1877 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 ELP1O95163 1332 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 MROH7Q68CQ1 1323 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 COL11A1P12107 1806 aaPredicted RBP10.1□□□□□ -0.79
HPS4-215ENST00000491142 TCRBV5S4A2TA0A5A2 114 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 GOLGA6L22H0YM25 854 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 ARVCFO00192 962 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 DUSP11O75319 330 aaKnown RBP10.1□□□□□ -0.79
HPS4-215ENST00000491142 C6orf222P0C671 652 aaPredicted RBP10.1□□□□□ -0.79
HPS4-215ENST00000491142 BMP1P13497 986 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 CDK8P49336 464 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 TFF2Q03403 129 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 PTH1RQ03431 593 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 NMIQ13287 307 aaPredicted RBP10.1□□□□□ -0.79
HPS4-215ENST00000491142 SLFNL1Q499Z3 407 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 FAM83BQ5T0W9 1011 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 PSRC1Q6PGN9 363 aaPredicted RBP10.1□□□□□ -0.79
HPS4-215ENST00000491142 FAM126BQ8IXS8 530 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.1□□□□□ -0.79
HPS4-215ENST00000491142 HERVK_113Q902F9 699 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 MAP4K1Q92918 833 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 FSD1Q9BTV5 496 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 BOLA2Q9H3K6 86 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 ISY1Q9ULR0 285 aaKnown RBP10.1□□□□□ -0.79
HPS4-215ENST00000491142 PARP14Q460N5 1801 aa10.1□□□□□ -0.79
HPS4-215ENST00000491142 MYO9BQ13459 2157 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 SYNGAP1Q96PV0 1343 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 DNAJC25-GNG10A0A024R161 153 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 RAD21O60216 631 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 CD4P01730 458 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 FGBP02675 491 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 CST5P28325 142 aaPredicted RBP10.09□□□□□ -0.79
HPS4-215ENST00000491142 RABGGTBP53611 331 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 ACVR2BQ13705 512 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 RAB30Q15771 203 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 CCDC144BQ3MJ40 725 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 GNASQ5JWF2 1037 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 L1TD1Q5T7N2 865 aaKnown RBP10.09□□□□□ -0.79
HPS4-215ENST00000491142 MAMDC4Q6UXC1 1216 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 MICALL1Q8N3F8 863 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 MSL3Q8N5Y2 521 aaKnown RBP10.09□□□□□ -0.79
HPS4-215ENST00000491142 DDX11Q96FC9 970 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 CCDC17Q96LX7 622 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 NUP88Q99567 741 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms