RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 ACAD9Q9H845 621 aa18.31■□□□□ 0.52
SCAMP3-208ENST00000490999 RNF146Q9NTX7 359 aa18.31■□□□□ 0.52
SCAMP3-208ENST00000490999 FEM1BQ9UK73 627 aa18.31■□□□□ 0.52
SCAMP3-208ENST00000490999 EPOPA6NHQ4 379 aa18.3■□□□□ 0.52
SCAMP3-208ENST00000490999 GSG1L2A8MUP6 293 aa18.3■□□□□ 0.52
SCAMP3-208ENST00000490999 DYNC1LI2O43237 492 aaPredicted RBP18.3■□□□□ 0.52
SCAMP3-208ENST00000490999 CA3P07451 260 aa18.3■□□□□ 0.52
SCAMP3-208ENST00000490999 ATP2A2P16615 1042 aaKnown RBP18.3■□□□□ 0.52
SCAMP3-208ENST00000490999 SNAP25P60880 206 aa18.3■□□□□ 0.52
SCAMP3-208ENST00000490999 NKX3-2P78367 333 aa18.3■□□□□ 0.52
SCAMP3-208ENST00000490999 TTLL4Q14679 1199 aa18.3■□□□□ 0.52
SCAMP3-208ENST00000490999 RASGRP2Q7LDG7 609 aa18.3■□□□□ 0.52
SCAMP3-208ENST00000490999 STRBPQ96SI9 672 aaKnown RBP18.3■□□□□ 0.52
SCAMP3-208ENST00000490999 MYH7P12883 1935 aa18.29■□□□□ 0.52
SCAMP3-208ENST00000490999 HMMRO75330 724 aa18.29■□□□□ 0.52
SCAMP3-208ENST00000490999 ARHGEF15O94989 841 aa18.29■□□□□ 0.52
SCAMP3-208ENST00000490999 CYP2C9P11712 490 aa18.29■□□□□ 0.52
SCAMP3-208ENST00000490999 OAZ1P54368 228 aa18.29■□□□□ 0.52
SCAMP3-208ENST00000490999 SBK1Q52WX2 424 aa18.29■□□□□ 0.52
SCAMP3-208ENST00000490999 DEFB128Q7Z7B8 93 aa18.29■□□□□ 0.52
SCAMP3-208ENST00000490999 PPP1R13LQ8WUF5 828 aa18.29■□□□□ 0.52
SCAMP3-208ENST00000490999 PURBQ96QR8 312 aaKnown RBP18.29■□□□□ 0.52
SCAMP3-208ENST00000490999 AP5M1Q9H0R1 490 aa18.29■□□□□ 0.52
SCAMP3-208ENST00000490999 TRMT13Q9NUP7 481 aaKnown RBP18.29■□□□□ 0.52
SCAMP3-208ENST00000490999 PCDHA11Q9Y5I1 949 aa18.29■□□□□ 0.52
SCAMP3-208ENST00000490999 TCF20Q9UGU0 1960 aaKnown RBP18.29■□□□□ 0.52
SCAMP3-208ENST00000490999 ZNF536O15090 1300 aa18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 TMEM232C9JQI7 657 aa18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 SMARCA5O60264 1052 aaPredicted RBP18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 CABYRO75952 493 aa18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 BMP3P12645 472 aa18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 TDO2P48775 406 aa18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 IKQ13123 557 aaPredicted RBP18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 SLFN13Q68D06 897 aa18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 ZSCAN25Q6NSZ9 544 aa18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 GMCL1P1Q8NEA9 526 aa18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 C1QTNF1Q9BXJ1 281 aa18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 ALDH8A1Q9H2A2 487 aaPredicted RBP18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 EPHX3Q9H6B9 360 aa18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 MTMR4Q9NYA4 1195 aa18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 COG6Q9Y2V7 657 aa18.28■□□□□ 0.52
SCAMP3-208ENST00000490999 RAB11FIP3O75154 756 aa18.27■□□□□ 0.52
SCAMP3-208ENST00000490999 ALAS1P13196 640 aa18.27■□□□□ 0.52
SCAMP3-208ENST00000490999 HNRNPUQ00839 825 aaKnown RBP eCLIP18.27■□□□□ 0.52
SCAMP3-208ENST00000490999 TSHZ3Q63HK5 1081 aa18.27■□□□□ 0.52
SCAMP3-208ENST00000490999 OSBP2Q969R2 916 aa18.27■□□□□ 0.52
SCAMP3-208ENST00000490999 MTCH2Q9Y6C9 303 aa18.27■□□□□ 0.52
SCAMP3-208ENST00000490999 MYH4Q9Y623 1939 aa18.27■□□□□ 0.51
SCAMP3-208ENST00000490999 ASB14A6NK59 587 aa18.26■□□□□ 0.51
SCAMP3-208ENST00000490999 M0R2C6 588 aa18.26■□□□□ 0.51
SCAMP3-208ENST00000490999 ERC2O15083 957 aa18.26■□□□□ 0.51
SCAMP3-208ENST00000490999 TTLL1O95922 423 aa18.26■□□□□ 0.51
SCAMP3-208ENST00000490999 STAT2P52630 851 aa18.26■□□□□ 0.51
SCAMP3-208ENST00000490999 MUM1L1Q5H9M0 696 aa18.26■□□□□ 0.51
SCAMP3-208ENST00000490999 TAPT1Q6NXT6 567 aa18.26■□□□□ 0.51
SCAMP3-208ENST00000490999 SPRED2Q7Z698 418 aa18.26■□□□□ 0.51
SCAMP3-208ENST00000490999 RPAP2Q8IXW5 612 aaPredicted RBP18.26■□□□□ 0.51
SCAMP3-208ENST00000490999 TRERF1Q96PN7 1200 aa18.26■□□□□ 0.51
SCAMP3-208ENST00000490999 PRRC2BQ5JSZ5 2229 aaKnown RBP18.26■□□□□ 0.51
SCAMP3-208ENST00000490999 RBAK-RBAKDNI3L0D1 243 aa18.25■□□□□ 0.51
SCAMP3-208ENST00000490999 GPAA1O43292 621 aa18.25■□□□□ 0.51
SCAMP3-208ENST00000490999 ZEB2O60315 1214 aa18.25■□□□□ 0.51
SCAMP3-208ENST00000490999 HOXD11P31277 338 aaPredicted RBP18.25■□□□□ 0.51
SCAMP3-208ENST00000490999 AAK1Q2M2I8 961 aa18.25■□□□□ 0.51
SCAMP3-208ENST00000490999 TMEM67Q5HYA8 995 aa18.25■□□□□ 0.51
SCAMP3-208ENST00000490999 RPUSD2Q8IZ73 545 aaKnown RBP18.25■□□□□ 0.51
SCAMP3-208ENST00000490999 ZNF444Q8N0Y2 327 aaPredicted RBP18.25■□□□□ 0.51
SCAMP3-208ENST00000490999 ARNTL2Q8WYA1 636 aa18.25■□□□□ 0.51
SCAMP3-208ENST00000490999 MKL1Q969V6 931 aa18.25■□□□□ 0.51
SCAMP3-208ENST00000490999 LRFN3Q9BTN0 628 aa18.25■□□□□ 0.51
SCAMP3-208ENST00000490999 PLIN4Q96Q06 1357 aa18.25■□□□□ 0.51
SCAMP3-208ENST00000490999 TNKSO95271 1327 aa18.24■□□□□ 0.51
SCAMP3-208ENST00000490999 FAM86C2PA6NEL3 165 aa18.24■□□□□ 0.51
SCAMP3-208ENST00000490999 GTPBP6O43824 516 aaPredicted RBP18.24■□□□□ 0.51
SCAMP3-208ENST00000490999 APPP05067 770 aa18.24■□□□□ 0.51
SCAMP3-208ENST00000490999 TSPY3P0CV98 308 aa18.24■□□□□ 0.51
SCAMP3-208ENST00000490999 TSPY8P0CW00 308 aa18.24■□□□□ 0.51
SCAMP3-208ENST00000490999 NSMFQ6X4W1 530 aa18.24■□□□□ 0.51
SCAMP3-208ENST00000490999 KCTD1Q719H9 257 aa18.24■□□□□ 0.51
SCAMP3-208ENST00000490999 CYP39A1Q9NYL5 469 aa18.24■□□□□ 0.51
SCAMP3-208ENST00000490999 COL4A4P53420 1690 aaPredicted RBP18.23■□□□□ 0.51
SCAMP3-208ENST00000490999 MYL3P08590 195 aa18.23■□□□□ 0.51
SCAMP3-208ENST00000490999 MCCP23508 829 aa18.23■□□□□ 0.51
SCAMP3-208ENST00000490999 SLC1A4P43007 532 aa18.23■□□□□ 0.51
SCAMP3-208ENST00000490999 FAM47CQ5HY64 1035 aa18.23■□□□□ 0.51
SCAMP3-208ENST00000490999 GIMAP6Q6P9H5 292 aa18.23■□□□□ 0.51
SCAMP3-208ENST00000490999 KIAA1211Q6ZU35 1233 aa18.23■□□□□ 0.51
SCAMP3-208ENST00000490999 APPBP2Q92624 585 aa18.23■□□□□ 0.51
SCAMP3-208ENST00000490999 KHSRPQ92945 711 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCAMP3-208ENST00000490999 ZBTB40Q9NUA8 1239 aa18.23■□□□□ 0.51
SCAMP3-208ENST00000490999 MTMR7Q9Y216 660 aa18.23■□□□□ 0.51
SCAMP3-208ENST00000490999 HCN4Q9Y3Q4 1203 aa18.23■□□□□ 0.51
SCAMP3-208ENST00000490999 LCTP09848 1927 aa18.23■□□□□ 0.51
SCAMP3-208ENST00000490999 TAP1Q03518 808 aa18.22■□□□□ 0.51
SCAMP3-208ENST00000490999 SYNPO2Q9UMS6 1093 aa18.22■□□□□ 0.51
SCAMP3-208ENST00000490999 PURAQ00577 322 aaKnown RBP18.21■□□□□ 0.51
SCAMP3-208ENST00000490999 IQSEC1Q6DN90 963 aa18.21■□□□□ 0.51
SCAMP3-208ENST00000490999 TMCO2Q7Z6W1 182 aaPredicted RBP18.21■□□□□ 0.51
SCAMP3-208ENST00000490999 FAM160B2Q86V87 743 aa18.21■□□□□ 0.51
SCAMP3-208ENST00000490999 KBTBD3Q8NAB2 608 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms