RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 NCOA7Q8NI08 942 aa23.1■■□□□ 1.29
SMC4-222ENST00000490207 ESYT1Q9BSJ8 1104 aa23.1■■□□□ 1.29
SMC4-222ENST00000490207 UBA5Q9GZZ9 404 aa23.1■■□□□ 1.29
SMC4-222ENST00000490207 SYNRGQ9UMZ2 1314 aa23.09■■□□□ 1.29
SMC4-222ENST00000490207 SYN1P17600 705 aa23.09■■□□□ 1.29
SMC4-222ENST00000490207 CDC37Q16543 378 aaPredicted RBP23.09■■□□□ 1.29
SMC4-222ENST00000490207 STOX1Q6ZVD7 989 aa23.09■■□□□ 1.29
SMC4-222ENST00000490207 LSG1Q9H089 658 aaKnown RBP23.09■■□□□ 1.29
SMC4-222ENST00000490207 RBM27Q9P2N5 1060 aaKnown RBP23.09■■□□□ 1.29
SMC4-222ENST00000490207 ASTN1O14525 1302 aa23.08■■□□□ 1.29
SMC4-222ENST00000490207 SLC34A2O95436 690 aa23.08■■□□□ 1.29
SMC4-222ENST00000490207 CCDC136Q96JN2 1154 aa23.08■■□□□ 1.29
SMC4-222ENST00000490207 KATNBL1Q9H079 304 aa23.08■■□□□ 1.29
SMC4-222ENST00000490207 PRO3102Q9H379 93 aa23.08■■□□□ 1.29
SMC4-222ENST00000490207 DNAH12Q6ZR08 3092 aa23.08■■□□□ 1.29
SMC4-222ENST00000490207 ERICH2A1L162 156 aa23.07■■□□□ 1.28
SMC4-222ENST00000490207 PTPDC1A2A3K4 754 aa23.07■■□□□ 1.28
SMC4-222ENST00000490207 IFIT3O14879 490 aaKnown RBP23.07■■□□□ 1.28
SMC4-222ENST00000490207 DHX16O60231 1041 aaKnown RBP23.07■■□□□ 1.28
SMC4-222ENST00000490207 ADAMTS4O75173 837 aa23.07■■□□□ 1.28
SMC4-222ENST00000490207 ADCYAP1R1P41586 468 aa23.07■■□□□ 1.28
SMC4-222ENST00000490207 RTP1P59025 263 aa23.07■■□□□ 1.28
SMC4-222ENST00000490207 BAATQ14032 418 aaPredicted RBP23.07■■□□□ 1.28
SMC4-222ENST00000490207 CCDC144BQ3MJ40 725 aa23.07■■□□□ 1.28
SMC4-222ENST00000490207 USH1GQ495M9 461 aa23.07■■□□□ 1.28
SMC4-222ENST00000490207 SLC30A10Q6XR72 485 aa23.07■■□□□ 1.28
SMC4-222ENST00000490207 ADGRF4Q8IZF3 695 aa23.07■■□□□ 1.28
SMC4-222ENST00000490207 CLEC4DQ8WXI8 215 aa23.07■■□□□ 1.28
SMC4-222ENST00000490207 PHF24Q9UPV7 400 aa23.07■■□□□ 1.28
SMC4-222ENST00000490207 ADCY6O43306 1168 aa23.06■■□□□ 1.28
SMC4-222ENST00000490207 DUSP11O75319 330 aaKnown RBP23.06■■□□□ 1.28
SMC4-222ENST00000490207 SART3Q15020 963 aaKnown RBP23.06■■□□□ 1.28
SMC4-222ENST00000490207 FERMT2Q96AC1 680 aa23.06■■□□□ 1.28
SMC4-222ENST00000490207 PURBQ96QR8 312 aaKnown RBP23.06■■□□□ 1.28
SMC4-222ENST00000490207 ADD3Q9UEY8 706 aaKnown RBP23.06■■□□□ 1.28
SMC4-222ENST00000490207 LTBP2Q14767 1821 aa23.05■■□□□ 1.28
SMC4-222ENST00000490207 ALDH5A1P51649 535 aaPredicted RBP23.05■■□□□ 1.28
SMC4-222ENST00000490207 WTAPQ15007 396 aa23.05■■□□□ 1.28
SMC4-222ENST00000490207 SLC39A5Q6ZMH5 540 aa23.05■■□□□ 1.28
SMC4-222ENST00000490207 RNF207Q6ZRF8 634 aa23.05■■□□□ 1.28
SMC4-222ENST00000490207 MB21D2Q8IYB1 491 aaPredicted RBP23.05■■□□□ 1.28
SMC4-222ENST00000490207 STAG2Q8N3U4 1231 aa23.05■■□□□ 1.28
SMC4-222ENST00000490207 ANO2Q9NQ90 1003 aa23.05■■□□□ 1.28
SMC4-222ENST00000490207 ATP11BQ9Y2G3 1177 aa23.05■■□□□ 1.28
SMC4-222ENST00000490207 DDX49Q9Y6V7 483 aaKnown RBP23.05■■□□□ 1.28
SMC4-222ENST00000490207 CALML3P27482 149 aa23.04■■□□□ 1.28
SMC4-222ENST00000490207 SNX17Q15036 470 aa23.04■■□□□ 1.28
SMC4-222ENST00000490207 CHST3Q7LGC8 479 aa23.04■■□□□ 1.28
SMC4-222ENST00000490207 ABCB11O95342 1321 aa23.04■■□□□ 1.28
SMC4-222ENST00000490207 TRIOBPQ9H2D6 2365 aa23.03■■□□□ 1.28
SMC4-222ENST00000490207 A0A1W2PQ45 241 aaPredicted RBP23.03■■□□□ 1.28
SMC4-222ENST00000490207 A0A1W2PQY0 241 aa23.03■■□□□ 1.28
SMC4-222ENST00000490207 NEFLP07196 543 aa23.03■■□□□ 1.28
SMC4-222ENST00000490207 ANTXR2P58335 489 aa23.03■■□□□ 1.28
SMC4-222ENST00000490207 RPS6P62753 249 aaKnown RBP23.03■■□□□ 1.28
SMC4-222ENST00000490207 QRICH1Q2TAL8 776 aa23.03■■□□□ 1.28
SMC4-222ENST00000490207 TMEM67Q5HYA8 995 aa23.03■■□□□ 1.28
SMC4-222ENST00000490207 FBXO16Q8IX29 292 aaPredicted RBP23.03■■□□□ 1.28
SMC4-222ENST00000490207 MORC4Q8TE76 937 aa23.03■■□□□ 1.28
SMC4-222ENST00000490207 GDF15Q99988 308 aa23.03■■□□□ 1.28
SMC4-222ENST00000490207 TSEN34Q9BSV6 310 aaKnown RBP23.03■■□□□ 1.28
SMC4-222ENST00000490207 JMJD4Q9H9V9 463 aa23.03■■□□□ 1.28
SMC4-222ENST00000490207 SPC25Q9HBM1 224 aa23.03■■□□□ 1.28
SMC4-222ENST00000490207 SENP2Q9HC62 589 aa23.03■■□□□ 1.28
SMC4-222ENST00000490207 MAD2L2Q9UI95 211 aa23.03■■□□□ 1.28
SMC4-222ENST00000490207 LOC102724159A0A0B4J2E5 919 aa23.02■■□□□ 1.28
SMC4-222ENST00000490207 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.02■■□□□ 1.28
SMC4-222ENST00000490207 MYADML2A6NDP7 307 aa23.02■■□□□ 1.28
SMC4-222ENST00000490207 SLC27A2O14975 620 aa23.02■■□□□ 1.28
SMC4-222ENST00000490207 C6orf222P0C671 652 aaPredicted RBP23.02■■□□□ 1.28
SMC4-222ENST00000490207 CST5P28325 142 aaPredicted RBP23.02■■□□□ 1.28
SMC4-222ENST00000490207 MAGEA10P43363 369 aaPredicted RBP23.02■■□□□ 1.28
SMC4-222ENST00000490207 TNFAIP2Q03169 654 aa23.02■■□□□ 1.28
SMC4-222ENST00000490207 GRM4Q14833 912 aa23.02■■□□□ 1.28
SMC4-222ENST00000490207 PWP2Q15269 919 aaKnown RBP23.02■■□□□ 1.28
SMC4-222ENST00000490207 TRIM60Q495X7 471 aa23.02■■□□□ 1.28
SMC4-222ENST00000490207 CASC1Q6TDU7 716 aa23.02■■□□□ 1.28
SMC4-222ENST00000490207 EEPD1Q7L9B9 569 aa23.02■■□□□ 1.28
SMC4-222ENST00000490207 KLHDC9Q8NEP7 349 aa23.02■■□□□ 1.28
SMC4-222ENST00000490207 UPF3AQ9H1J1 476 aaKnown RBP23.02■■□□□ 1.28
SMC4-222ENST00000490207 VAT1LQ9HCJ6 419 aa23.02■■□□□ 1.28
SMC4-222ENST00000490207 VTA1Q9NP79 307 aa23.02■■□□□ 1.28
SMC4-222ENST00000490207 PCDH10Q9P2E7 1040 aa23.02■■□□□ 1.28
SMC4-222ENST00000490207 A0A1W2PPC1 479 aa23.01■■□□□ 1.27
SMC4-222ENST00000490207 MOXD2PA6NHM9 499 aa23.01■■□□□ 1.27
SMC4-222ENST00000490207 KLRF2D3W0D1 207 aa23.01■■□□□ 1.27
SMC4-222ENST00000490207 CDC45O75419 566 aa23.01■■□□□ 1.27
SMC4-222ENST00000490207 FXR1P51114 621 aaKnown RBP eCLIP23.01■■□□□ 1.27
SMC4-222ENST00000490207 GJA9P57773 515 aa23.01■■□□□ 1.27
SMC4-222ENST00000490207 CREB3L3Q68CJ9 461 aa23.01■■□□□ 1.27
SMC4-222ENST00000490207 FBXO11Q86XK2 927 aa23.01■■□□□ 1.27
SMC4-222ENST00000490207 PALM3A6NDB9 673 aaPredicted RBP23■■□□□ 1.27
SMC4-222ENST00000490207 ACLYP53396 1101 aa23■■□□□ 1.27
SMC4-222ENST00000490207 IRX5P78411 483 aaPredicted RBP23■■□□□ 1.27
SMC4-222ENST00000490207 C1orf53Q5VUE5 145 aa23■■□□□ 1.27
SMC4-222ENST00000490207 NOL8Q76FK4 1167 aaKnown RBP23■■□□□ 1.27
SMC4-222ENST00000490207 MPHOSPH6Q99547 160 aaKnown RBP23■■□□□ 1.27
SMC4-222ENST00000490207 PRKAG2Q9UGJ0 569 aa23■■□□□ 1.27
SMC4-222ENST00000490207 RANBP2P49792 3224 aaKnown RBP23■■□□□ 1.27
SMC4-222ENST00000490207 PRC1O43663 620 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms