RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 ANKRD33Q7Z3H0 272 aa11.45□□□□□ -0.58
TMEM39A-210ENST00000490099 CCDC144CPQ8IYA2 1237 aa11.45□□□□□ -0.58
TMEM39A-210ENST00000490099 TDHQ8IZJ6 230 aa11.45□□□□□ -0.58
TMEM39A-210ENST00000490099 ESR2Q92731 530 aa11.45□□□□□ -0.58
TMEM39A-210ENST00000490099 DIAPH3Q9NSV4 1193 aa11.45□□□□□ -0.58
TMEM39A-210ENST00000490099 CYP39A1Q9NYL5 469 aa11.45□□□□□ -0.58
TMEM39A-210ENST00000490099 ZSWIM5Q9P217 1185 aa11.45□□□□□ -0.58
TMEM39A-210ENST00000490099 PNMA2Q9UL42 364 aa11.45□□□□□ -0.58
TMEM39A-210ENST00000490099 CIZ1Q9ULV3 898 aaPredicted RBP11.45□□□□□ -0.58
TMEM39A-210ENST00000490099 SYNRGQ9UMZ2 1314 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 LOC102724159A0A0B4J2E5 919 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 MOXD2PA6NHM9 499 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 ALAS1P13196 640 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 SLC16A2P36021 539 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 CDK7P50613 346 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 ACLYP53396 1101 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 GJA9P57773 515 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 SNAP25P60880 206 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 TLE2Q04725 743 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 PWP2Q15269 919 aaKnown RBP11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 CCDC144BQ3MJ40 725 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 CCDC178Q5BJE1 867 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 CLEC4DQ8WXI8 215 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 FERMT2Q96AC1 680 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 LENG1Q96BZ8 264 aaPredicted RBP11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 TOX2Q96NM4 488 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 MAF1Q9H063 256 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 TOMM22Q9NS69 142 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 HOMER2Q9NSB8 354 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 CTNNA3Q9UI47 895 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 SZT2Q5T011 3432 aa11.44□□□□□ -0.58
TMEM39A-210ENST00000490099 ELP1O95163 1332 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 WDR19Q8NEZ3 1342 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 A0A1W2PQ45 241 aaPredicted RBP11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 A0A1W2PQY0 241 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 MYADML2A6NDP7 307 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 ASB14A6NK59 587 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 KIAA0355O15063 1070 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 SLC4A3P48751 1232 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 IKQ13123 557 aaPredicted RBP11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 KCNA10Q16322 511 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 TRIM60Q495X7 471 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 GPATCH4Q5T3I0 446 aaKnown RBP11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 TAPT1Q6NXT6 567 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 CCDC174Q6PII3 467 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 RGS22Q8NE09 1264 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 CHMP4CQ96CF2 233 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 UBE2OQ9C0C9 1292 aaKnown RBP11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 GPCPD1Q9NPB8 672 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 PDLIM7Q9NR12 457 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 CCPG1Q9ULG6 757 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 GNEQ9Y223 722 aaKnown RBP11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 LAMA3Q16787 3333 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 MCM3APO60318 1980 aa11.43□□□□□ -0.58
TMEM39A-210ENST00000490099 TRIM43BA6NCK2 446 aa11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 B4E1Z4 1266 aa11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 KDM4AO75164 1064 aa11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 CHMLP26374 656 aa11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 IRX5P78411 483 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 MDM2Q00987 491 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 BAATQ14032 418 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 IMMTQ16891 758 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 CCDC96Q2M329 555 aa11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 IQSEC1Q6DN90 963 aa11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 SH3RF1Q7Z6J0 888 aa11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 IQCA1Q86XH1 822 aa11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 ENAHQ8N8S7 591 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 TRIM43Q96BQ3 446 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 LRCH3Q96II8 777 aa11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 ZSCAN10Q96SZ4 725 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 LBHD1Q9BQE6 289 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 ZHX1Q9UKY1 873 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 ATP11BQ9Y2G3 1177 aa11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 Q9Y3F1 56 aa11.42□□□□□ -0.58
TMEM39A-210ENST00000490099 FRMPD2Q68DX3 1309 aaPredicted RBP11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 RAD50Q92878 1312 aa11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 RBM47A0AV96 593 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 NFIBO00712 420 aa11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 EDNRBP24530 442 aa11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 ITGB8P26012 769 aa11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 SEC23AQ15436 765 aa11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 SLC43A3Q8NBI5 491 aa11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 PCSK9Q8NBP7 692 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 PNMA1Q8ND90 353 aa11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 NUP133Q8WUM0 1156 aa11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 PURBQ96QR8 312 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 ZKSCAN3Q9BRR0 538 aa11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 KRT23Q9C075 422 aa11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 CNNM2Q9H8M5 875 aa11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 ISY1Q9ULR0 285 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-210ENST00000490099 LAMA4Q16363 1823 aa11.4□□□□□ -0.58
TMEM39A-210ENST00000490099 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.4□□□□□ -0.58
TMEM39A-210ENST00000490099 SMPD1P17405 629 aa11.4□□□□□ -0.58
TMEM39A-210ENST00000490099 TNFAIP2Q03169 654 aa11.4□□□□□ -0.58
TMEM39A-210ENST00000490099 FAAP100Q0VG06 881 aa11.4□□□□□ -0.58
TMEM39A-210ENST00000490099 ASPRV1Q53RT3 343 aa11.4□□□□□ -0.58
TMEM39A-210ENST00000490099 VTA1Q9NP79 307 aa11.4□□□□□ -0.58
TMEM39A-210ENST00000490099 PDGFCQ9NRA1 345 aa11.4□□□□□ -0.58
TMEM39A-210ENST00000490099 TBX21Q9UL17 535 aa11.4□□□□□ -0.58
TMEM39A-210ENST00000490099 MTMR7Q9Y216 660 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms