RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 BRMS1Q9HCU9 246 aa14.91□□□□□ -0.02
TNXB-206ENST00000490077 SALL4Q9UJQ4 1053 aa14.91□□□□□ -0.02
TNXB-206ENST00000490077 LRRC10BA6NIK2 292 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 RAD21O60216 631 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 NDUFA10O95299 355 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 UBA7P41226 1012 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 TTI2Q6NXR4 508 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 FCHSD1Q86WN1 690 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 GPR161Q8N6U8 529 aaKnown RBP14.9□□□□□ -0.02
TNXB-206ENST00000490077 ZNF507Q8TCN5 953 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 GOLGA1Q92805 767 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 NGLY1Q96IV0 654 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 SEMA6BQ9H3T3 888 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 ARFGAP3Q9NP61 516 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 KCNQ5Q9NR82 932 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 FAM207AQ9NSI2 230 aaPredicted RBP14.9□□□□□ -0.02
TNXB-206ENST00000490077 NPHP3-ACAD11A0A0J9YXS1 232 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 NCK2O43639 380 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 LDHBP07195 334 aaKnown RBP14.9□□□□□ -0.02
TNXB-206ENST00000490077 CAPN2P17655 700 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 CACNB3P54284 484 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 IKZF4Q9H2S9 585 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 GPCPD1Q9NPB8 672 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 LRRC4BQ9NT99 713 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 MYH10P35580 1976 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 SMCO2A6NFE2 343 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 AMPD2Q01433 879 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 BARGINQ6ZT62 677 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 VPS18Q9P253 973 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 ZNF652Q9Y2D9 606 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 FAN1Q9Y2M0 1017 aa14.9□□□□□ -0.02
TNXB-206ENST00000490077 MATR3P43243 847 aaKnown RBP eCLIP14.89□□□□□ -0.03
TNXB-206ENST00000490077 BTDP43251 543 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 CDK8P49336 464 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 NAPAP54920 295 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 PDE4DQ08499 809 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 TBCKQ8TEA7 893 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 CTAGE9A4FU28 777 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 ASIC1P78348 528 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 FILIP1LQ4L180 1135 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 MIIPQ5JXC2 388 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 CSGALNACT2Q8N6G5 542 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 RABGGTAQ92696 567 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 PCMTD1Q96MG8 357 aaPredicted RBP14.89□□□□□ -0.03
TNXB-206ENST00000490077 TUBGCP2Q9BSJ2 902 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 EHD4Q9H223 541 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 ADAM21Q9UKJ8 722 aa14.89□□□□□ -0.03
TNXB-206ENST00000490077 LMAN1P49257 510 aa14.88□□□□□ -0.03
TNXB-206ENST00000490077 SLC7A5Q01650 507 aa14.88□□□□□ -0.03
TNXB-206ENST00000490077 CRACR2AQ9BSW2 395 aa14.88□□□□□ -0.03
TNXB-206ENST00000490077 ATP8A2Q9NTI2 1148 aa14.88□□□□□ -0.03
TNXB-206ENST00000490077 TRIM66O15016 1216 aa14.88□□□□□ -0.03
TNXB-206ENST00000490077 C2orf54Q08AI8 447 aa14.88□□□□□ -0.03
TNXB-206ENST00000490077 GRM4Q14833 912 aa14.88□□□□□ -0.03
TNXB-206ENST00000490077 FAM196AQ6ZSG2 479 aa14.88□□□□□ -0.03
TNXB-206ENST00000490077 CABP7Q86V35 215 aa14.88□□□□□ -0.03
TNXB-206ENST00000490077 ZFPM1Q8IX07 1006 aa14.88□□□□□ -0.03
TNXB-206ENST00000490077 ZNF444Q8N0Y2 327 aaPredicted RBP14.88□□□□□ -0.03
TNXB-206ENST00000490077 COG1Q8WTW3 980 aa14.88□□□□□ -0.03
TNXB-206ENST00000490077 MYMKA6NI61 221 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 PPP1R11O60927 126 aaPredicted RBP14.87□□□□□ -0.03
TNXB-206ENST00000490077 SCNN1DP51172 638 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 RNASE9P60153 205 aaKnown RBP14.87□□□□□ -0.03
TNXB-206ENST00000490077 CCDC122Q5T0U0 273 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 EYA3Q99504 573 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 RTFDC1Q9BY42 306 aaPredicted RBP14.87□□□□□ -0.03
TNXB-206ENST00000490077 TRIM9Q9C026 710 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 DDX4Q9NQI0 724 aaKnown RBP14.87□□□□□ -0.03
TNXB-206ENST00000490077 KBTBD4Q9NVX7 518 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 BARHL2Q9NY43 387 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 POLLQ9UGP5 575 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 NARFQ9UHQ1 456 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 CCNL1Q9UK58 526 aaPredicted RBP14.87□□□□□ -0.03
TNXB-206ENST00000490077 CAPN6Q9Y6Q1 641 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 PALM3A6NDB9 673 aaPredicted RBP14.87□□□□□ -0.03
TNXB-206ENST00000490077 VGLL3A8MV65 326 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 CCP110O43303 1012 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 FAM193AP78312 1265 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 TBC1D8BQ0IIM8 1120 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 CLEC4GQ6UXB4 293 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 CNOT6LQ96LI5 555 aaKnown RBP14.87□□□□□ -0.03
TNXB-206ENST00000490077 NAPGQ99747 312 aaPredicted RBP14.87□□□□□ -0.03
TNXB-206ENST00000490077 LRWD1Q9UFC0 647 aa14.87□□□□□ -0.03
TNXB-206ENST00000490077 SLC10A5Q5PT55 438 aa14.86□□□□□ -0.03
TNXB-206ENST00000490077 CNGA4Q8IV77 575 aa14.86□□□□□ -0.03
TNXB-206ENST00000490077 GOLPH3Q9H4A6 298 aa14.86□□□□□ -0.03
TNXB-206ENST00000490077 BLOC1S4Q9NUP1 217 aa14.86□□□□□ -0.03
TNXB-206ENST00000490077 ARGLU1Q9NWB6 273 aaPredicted RBP14.86□□□□□ -0.03
TNXB-206ENST00000490077 ARPP21Q9UBL0 812 aaPredicted RBP14.86□□□□□ -0.03
TNXB-206ENST00000490077 MYO6Q9UM54 1294 aa14.86□□□□□ -0.03
TNXB-206ENST00000490077 L1RE1Q9UN81 338 aa14.86□□□□□ -0.03
TNXB-206ENST00000490077 LGALS16A8MUM7 142 aa14.86□□□□□ -0.03
TNXB-206ENST00000490077 CALM1P0DP23 149 aa14.86□□□□□ -0.03
TNXB-206ENST00000490077 CALM2P0DP24 149 aa14.86□□□□□ -0.03
TNXB-206ENST00000490077 CALM3P0DP25 149 aa14.86□□□□□ -0.03
TNXB-206ENST00000490077 IDEP14735 1019 aa14.86□□□□□ -0.03
TNXB-206ENST00000490077 RCAN1P53805 252 aa14.86□□□□□ -0.03
TNXB-206ENST00000490077 TRADDQ15628 312 aa14.86□□□□□ -0.03
TNXB-206ENST00000490077 TTC19Q6DKK2 380 aaPredicted RBP14.86□□□□□ -0.03
TNXB-206ENST00000490077 CYP26C1Q6V0L0 522 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms