RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 SAMD3Q8N6K7 520 aa20.22■□□□□ 0.83
ERCC3-207ENST00000490062 CLEC4DQ8WXI8 215 aa20.22■□□□□ 0.83
ERCC3-207ENST00000490062 RRP36Q96EU6 259 aaKnown RBP20.22■□□□□ 0.83
ERCC3-207ENST00000490062 TRERF1Q96PN7 1200 aa20.22■□□□□ 0.83
ERCC3-207ENST00000490062 PIGSQ96S52 555 aa20.22■□□□□ 0.83
ERCC3-207ENST00000490062 VAT1LQ9HCJ6 419 aa20.22■□□□□ 0.83
ERCC3-207ENST00000490062 RBM27Q9P2N5 1060 aaKnown RBP20.22■□□□□ 0.83
ERCC3-207ENST00000490062 GABRQQ9UN88 632 aa20.22■□□□□ 0.83
ERCC3-207ENST00000490062 PPP1R11O60927 126 aaPredicted RBP20.21■□□□□ 0.83
ERCC3-207ENST00000490062 ALAS1P13196 640 aa20.21■□□□□ 0.83
ERCC3-207ENST00000490062 ADORA2AP29274 412 aa20.21■□□□□ 0.83
ERCC3-207ENST00000490062 KCTD2Q14681 263 aa20.21■□□□□ 0.83
ERCC3-207ENST00000490062 TEX2Q8IWB9 1127 aa20.21■□□□□ 0.83
ERCC3-207ENST00000490062 TRMT44Q8IYL2 757 aaKnown RBP20.21■□□□□ 0.83
ERCC3-207ENST00000490062 MMP19Q99542 508 aa20.21■□□□□ 0.83
ERCC3-207ENST00000490062 APBA2Q99767 749 aa20.21■□□□□ 0.83
ERCC3-207ENST00000490062 PFASO15067 1338 aa20.21■□□□□ 0.83
ERCC3-207ENST00000490062 hCG_1984214I3L0E3 225 aa20.2■□□□□ 0.82
ERCC3-207ENST00000490062 ZNF713Q8N859 430 aaPredicted RBP20.2■□□□□ 0.82
ERCC3-207ENST00000490062 RNF26Q9BY78 433 aaPredicted RBP20.2■□□□□ 0.82
ERCC3-207ENST00000490062 CWC22Q9HCG8 908 aaKnown RBP20.2■□□□□ 0.82
ERCC3-207ENST00000490062 A1CFQ9NQ94 594 aaKnown RBP20.2■□□□□ 0.82
ERCC3-207ENST00000490062 MAP3K20Q9NYL2 800 aaKnown RBP20.2■□□□□ 0.82
ERCC3-207ENST00000490062 MRPL11Q9Y3B7 192 aaKnown RBP20.2■□□□□ 0.82
ERCC3-207ENST00000490062 PTCH2Q9Y6C5 1203 aa20.2■□□□□ 0.82
ERCC3-207ENST00000490062 ZNF792Q3KQV3 632 aa20.19■□□□□ 0.82
ERCC3-207ENST00000490062 MUM1L1Q5H9M0 696 aa20.19■□□□□ 0.82
ERCC3-207ENST00000490062 COL13A1Q5TAT6 717 aaPredicted RBP20.19■□□□□ 0.82
ERCC3-207ENST00000490062 WDR78Q5VTH9 848 aa20.19■□□□□ 0.82
ERCC3-207ENST00000490062 SLAIN1Q8ND83 568 aa20.19■□□□□ 0.82
ERCC3-207ENST00000490062 MCOLN1Q9GZU1 580 aa20.19■□□□□ 0.82
ERCC3-207ENST00000490062 SLC5A4Q9NY91 659 aa20.19■□□□□ 0.82
ERCC3-207ENST00000490062 SEC63Q9UGP8 760 aaKnown RBP20.19■□□□□ 0.82
ERCC3-207ENST00000490062 LIMCH1Q9UPQ0 1083 aa20.19■□□□□ 0.82
ERCC3-207ENST00000490062 HTTP42858 3142 aa20.18■□□□□ 0.82
ERCC3-207ENST00000490062 LOC102724159A0A0B4J2E5 919 aa20.18■□□□□ 0.82
ERCC3-207ENST00000490062 PRPF3O43395 683 aaKnown RBP20.18■□□□□ 0.82
ERCC3-207ENST00000490062 ST18O60284 1047 aa20.18■□□□□ 0.82
ERCC3-207ENST00000490062 COBLO75128 1261 aa20.18■□□□□ 0.82
ERCC3-207ENST00000490062 SCRN1Q12765 414 aa20.18■□□□□ 0.82
ERCC3-207ENST00000490062 PWP2Q15269 919 aaKnown RBP20.18■□□□□ 0.82
ERCC3-207ENST00000490062 ME3Q16798 604 aa20.18■□□□□ 0.82
ERCC3-207ENST00000490062 OLFML2BQ68BL8 750 aa20.18■□□□□ 0.82
ERCC3-207ENST00000490062 ZNF467Q7Z7K2 595 aaPredicted RBP20.18■□□□□ 0.82
ERCC3-207ENST00000490062 HOMER1Q86YM7 354 aa20.18■□□□□ 0.82
ERCC3-207ENST00000490062 CMTR1Q8N1G2 835 aaKnown RBP20.18■□□□□ 0.82
ERCC3-207ENST00000490062 MSL3Q8N5Y2 521 aaKnown RBP20.18■□□□□ 0.82
ERCC3-207ENST00000490062 FAM133AQ8N9E0 248 aa20.18■□□□□ 0.82
ERCC3-207ENST00000490062 RAET1EQ8TD07 263 aa20.18■□□□□ 0.82
ERCC3-207ENST00000490062 SLKQ9H2G2 1235 aaPredicted RBP20.18■□□□□ 0.82
ERCC3-207ENST00000490062 CYP39A1Q9NYL5 469 aa20.18■□□□□ 0.82
ERCC3-207ENST00000490062 NAP1L2Q9ULW6 460 aaPredicted RBP20.18■□□□□ 0.82
ERCC3-207ENST00000490062 PCDHA1Q9Y5I3 950 aa20.18■□□□□ 0.82
ERCC3-207ENST00000490062 RBBP6Q7Z6E9 1792 aaKnown RBP20.17■□□□□ 0.82
ERCC3-207ENST00000490062 NFIBO00712 420 aa20.17■□□□□ 0.82
ERCC3-207ENST00000490062 OPLAHO14841 1288 aa20.17■□□□□ 0.82
ERCC3-207ENST00000490062 MCM2P49736 904 aa20.17■□□□□ 0.82
ERCC3-207ENST00000490062 CCT2P78371 535 aaKnown RBP20.17■□□□□ 0.82
ERCC3-207ENST00000490062 CPLX2Q6PUV4 134 aaKnown RBP20.17■□□□□ 0.82
ERCC3-207ENST00000490062 MCF2L2Q86YR7 1114 aa20.17■□□□□ 0.82
ERCC3-207ENST00000490062 ANKRD35Q8N283 1001 aa20.17■□□□□ 0.82
ERCC3-207ENST00000490062 GTF3C6Q969F1 213 aa20.17■□□□□ 0.82
ERCC3-207ENST00000490062 ARMC5Q96C12 935 aa20.17■□□□□ 0.82
ERCC3-207ENST00000490062 ZSCAN31Q96LW9 406 aaPredicted RBP20.17■□□□□ 0.82
ERCC3-207ENST00000490062 NCOA5Q9HCD5 579 aaKnown RBP20.17■□□□□ 0.82
ERCC3-207ENST00000490062 HOMER2Q9NSB8 354 aa20.17■□□□□ 0.82
ERCC3-207ENST00000490062 PLXNA1Q9UIW2 1896 aa20.16■□□□□ 0.82
ERCC3-207ENST00000490062 ADCY3O60266 1144 aa20.16■□□□□ 0.82
ERCC3-207ENST00000490062 GRK4P32298 578 aa20.16■□□□□ 0.82
ERCC3-207ENST00000490062 PFKFB3Q16875 520 aaPredicted RBP20.16■□□□□ 0.82
ERCC3-207ENST00000490062 USH1GQ495M9 461 aa20.16■□□□□ 0.82
ERCC3-207ENST00000490062 PPP1R18Q6NYC8 613 aa20.16■□□□□ 0.82
ERCC3-207ENST00000490062 DPP9Q86TI2 863 aa20.16■□□□□ 0.82
ERCC3-207ENST00000490062 FAM177A1Q8N128 213 aaPredicted RBP20.16■□□□□ 0.82
ERCC3-207ENST00000490062 NPLOC4Q8TAT6 608 aa20.16■□□□□ 0.82
ERCC3-207ENST00000490062 DDX11Q96FC9 970 aa20.16■□□□□ 0.82
ERCC3-207ENST00000490062 LARP6Q9BRS8 491 aaKnown RBP20.16■□□□□ 0.82
ERCC3-207ENST00000490062 SH2B1Q9NRF2 756 aaPredicted RBP20.16■□□□□ 0.82
ERCC3-207ENST00000490062 V9GY48 417 aaPredicted RBP20.16■□□□□ 0.82
ERCC3-207ENST00000490062 CDKL5O76039 1030 aa20.15■□□□□ 0.82
ERCC3-207ENST00000490062 ECM2O94769 699 aaPredicted RBP20.15■□□□□ 0.82
ERCC3-207ENST00000490062 LARGE1O95461 756 aa20.15■□□□□ 0.82
ERCC3-207ENST00000490062 TAL1P17542 331 aaPredicted RBP20.15■□□□□ 0.82
ERCC3-207ENST00000490062 CYP2B6P20813 491 aa20.15■□□□□ 0.82
ERCC3-207ENST00000490062 HSD17B4P51659 736 aa20.15■□□□□ 0.82
ERCC3-207ENST00000490062 MAMDC4Q6UXC1 1216 aa20.15■□□□□ 0.82
ERCC3-207ENST00000490062 CCDC82Q8N4S0 544 aa20.15■□□□□ 0.82
ERCC3-207ENST00000490062 MAML3Q96JK9 1138 aa20.15■□□□□ 0.82
ERCC3-207ENST00000490062 FGD4Q96M96 766 aa20.15■□□□□ 0.82
ERCC3-207ENST00000490062 STK36Q9NRP7 1315 aa20.15■□□□□ 0.82
ERCC3-207ENST00000490062 LCTP09848 1927 aa20.15■□□□□ 0.82
ERCC3-207ENST00000490062 CPLX1O14810 134 aa20.14■□□□□ 0.81
ERCC3-207ENST00000490062 HMGCRP04035 888 aa20.14■□□□□ 0.81
ERCC3-207ENST00000490062 SLC4A3P48751 1232 aa20.14■□□□□ 0.81
ERCC3-207ENST00000490062 RPS6P62753 249 aaKnown RBP20.14■□□□□ 0.81
ERCC3-207ENST00000490062 PKN1Q16512 942 aa20.14■□□□□ 0.81
ERCC3-207ENST00000490062 MAP3K21Q5TCX8 1036 aa20.14■□□□□ 0.81
ERCC3-207ENST00000490062 RNF207Q6ZRF8 634 aa20.14■□□□□ 0.81
ERCC3-207ENST00000490062 TRIB2Q92519 343 aa20.14■□□□□ 0.81
ERCC3-207ENST00000490062 BARHL2Q9NY43 387 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms