RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 FAM151AQ8WW52 585 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 MKL1Q969V6 931 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 CLIC6Q96NY7 704 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 TDRD3Q9H7E2 651 aaKnown RBP11.05□□□□□ -0.64
NOD1-208ENST00000489614 MYOZ2Q9NPC6 264 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 SYNPO2Q9UMS6 1093 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
NOD1-208ENST00000489614 G3V3G9 751 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 WNT10BO00744 389 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 CALM1P0DP23 149 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 CALM2P0DP24 149 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 CALM3P0DP25 149 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 DCAF8Q5TAQ9 597 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 TMTC3Q6ZXV5 915 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 SERPINB13Q9UIV8 391 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 EGFRP00533 1210 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 PDCP20941 246 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 SMARCA1P28370 1054 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 IRX1P78414 480 aaPredicted RBP11.04□□□□□ -0.64
NOD1-208ENST00000489614 JAG1P78504 1218 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 FMNL3Q8IVF7 1028 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 ETAA1Q9NY74 926 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 ODF2LQ9ULJ1 636 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 SLC12A7Q9Y666 1083 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 VPS37CA5D8V6 355 aaPredicted RBP11.04□□□□□ -0.64
NOD1-208ENST00000489614 NEMFO60524 1076 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 AKR1B1P15121 316 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 NPY5RQ15761 445 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 IQCA1Q86XH1 822 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 TMEM47Q9BQJ4 181 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 ZNF287Q9HBT7 754 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 MTMR4Q9NYA4 1195 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 PI4KBQ9UBF8 816 aa11.04□□□□□ -0.64
NOD1-208ENST00000489614 GOLGA6L4A6NEF3 574 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 EFCAB8A8MWE9 144 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 PRPF3O43395 683 aaKnown RBP11.03□□□□□ -0.64
NOD1-208ENST00000489614 PPFIA4O75335 1185 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 POLR3DP05423 398 aaPredicted RBP11.03□□□□□ -0.64
NOD1-208ENST00000489614 MYBL2P10244 700 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 LMNB1P20700 586 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 GCKP35557 465 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 IFIT1BQ5T764 474 aaKnown RBP11.03□□□□□ -0.64
NOD1-208ENST00000489614 FOXP4Q8IVH2 680 aaPredicted RBP11.03□□□□□ -0.64
NOD1-208ENST00000489614 UBAC1Q9BSL1 405 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 MYL10Q9BUA6 226 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 RNF26Q9BY78 433 aaPredicted RBP11.03□□□□□ -0.64
NOD1-208ENST00000489614 LCTP09848 1927 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 GOLGA8AA7E2F4 631 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 CCT5P48643 541 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 FERMT3Q86UX7 667 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 CENPHQ9H3R5 247 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 HDAC9Q9UKV0 1011 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 UBE2Q2LH0YL09 131 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 MYO1FO00160 1098 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 GCFC2P16383 781 aaKnown RBP11.03□□□□□ -0.64
NOD1-208ENST00000489614 CACNB3P54284 484 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 RTN1Q16799 776 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 RRP12Q5JTH9 1297 aaKnown RBP11.03□□□□□ -0.64
NOD1-208ENST00000489614 AMOTL1Q8IY63 956 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 GPC2Q8N158 579 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 SRBD1Q8N5C6 995 aaKnown RBP11.03□□□□□ -0.64
NOD1-208ENST00000489614 ZNF483Q8TF39 744 aaPredicted RBP11.03□□□□□ -0.64
NOD1-208ENST00000489614 CEP95Q96GE4 821 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 KIF9Q9HAQ2 790 aa11.03□□□□□ -0.64
NOD1-208ENST00000489614 MYH7BA7E2Y1 1941 aa11.02□□□□□ -0.64
NOD1-208ENST00000489614 PHF20L1A8MW92 1017 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 BECN2A8MW95 431 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 ETF1P62495 437 aaKnown RBP11.02□□□□□ -0.65
NOD1-208ENST00000489614 ACTN3Q08043 901 aaPredicted RBP11.02□□□□□ -0.65
NOD1-208ENST00000489614 PICALMQ13492 652 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 HSP90B2PQ58FF3 399 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 LARP1BQ659C4 914 aaKnown RBP11.02□□□□□ -0.65
NOD1-208ENST00000489614 TNFRSF25Q93038 417 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 TATDN2Q93075 761 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 MTMR8Q96EF0 704 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 HERC5Q9UII4 1024 aaKnown RBP11.02□□□□□ -0.65
NOD1-208ENST00000489614 G3BP2Q9UN86 482 aaKnown RBP11.02□□□□□ -0.65
NOD1-208ENST00000489614 CAPN7Q9Y6W3 813 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 ZC3H4Q9UPT8 1303 aaKnown RBP11.02□□□□□ -0.65
NOD1-208ENST00000489614 M0R2N6 131 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 RPS6KA5O75582 802 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 CDKL5O76039 1030 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 PLEKHA8P1O95397 391 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 SLURP2P0DP57 97 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 RXRAP19793 462 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 GMPSP49915 693 aaPredicted RBP11.02□□□□□ -0.65
NOD1-208ENST00000489614 CEP57Q86XR8 500 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 CCDC17Q96LX7 622 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 FAM204AQ9H8W3 233 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 PRDM16Q9HAZ2 1276 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 PICK1Q9NRD5 415 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 BIN2Q9UBW5 565 aaPredicted RBP11.02□□□□□ -0.65
NOD1-208ENST00000489614 FAM169AQ9Y6X4 670 aa11.02□□□□□ -0.65
NOD1-208ENST00000489614 TSPY2A6NKD2 308 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 CYTH3O43739 400 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 CLNS1AP54105 237 aaKnown RBP11.01□□□□□ -0.65
NOD1-208ENST00000489614 MICU3Q86XE3 530 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 PARD3BQ8TEW8 1205 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 JDP2Q8WYK2 163 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 ZBTB10Q96DT7 871 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms