RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 AGXT2Q9BYV1 514 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 SENP6Q9GZR1 1112 aaPredicted RBP12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 KAT14Q9H8E8 782 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 GPCPD1Q9NPB8 672 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 A1CFQ9NQ94 594 aaKnown RBP12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 ZSWIM5Q9P217 1185 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 CCPG1Q9ULG6 757 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 FRMPD2Q68DX3 1309 aaPredicted RBP12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 CEP290O15078 2479 aa12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 SNAI1O95863 264 aaPredicted RBP12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 TAL1P17542 331 aaPredicted RBP12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 SNAP25P60880 206 aa12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 TRDNQ13061 729 aa12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 TOB2Q14106 344 aaPredicted RBP12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 LRRC26Q2I0M4 334 aa12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 GJC2Q5T442 439 aaPredicted RBP12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 CHST3Q7LGC8 479 aa12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 FAM133AQ8N9E0 248 aa12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 PNMA1Q8ND90 353 aa12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 UBAC1Q9BSL1 405 aa12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 ALDH8A1Q9H2A2 487 aaPredicted RBP12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 ABHD16BQ9H3Z7 469 aa12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 XPNPEP3Q9NQH7 507 aa12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 DAXXQ9UER7 740 aaPredicted RBP12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 FAM184BQ9ULE4 1060 aa12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 FRMPD3Q5JV73 1810 aa12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 WDR19Q8NEZ3 1342 aa12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 ZNFX1Q9P2E3 1918 aaKnown RBP12.31□□□□□ -0.44
SCAMP4-208ENST00000489554 PRC1O43663 620 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 PSMA5P28066 241 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 NEK4P51957 841 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 ACVR2BQ13705 512 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 LRRC41Q15345 812 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 BLOC1S2Q6QNY1 142 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 ARMCX2Q7L311 632 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 DHX32Q7L7V1 743 aaKnown RBP12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 RNF180Q86T96 592 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 FBXL16Q8N461 479 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 ENAHQ8N8S7 591 aaPredicted RBP12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 IGDCC4Q8TDY8 1250 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 FGD4Q96M96 766 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 LRRC2Q9BYS8 371 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 PRO3102Q9H379 93 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 SENP2Q9HC62 589 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 ZHX1Q9UKY1 873 aaPredicted RBP12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 CYP46A1Q9Y6A2 500 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 TNKSO95271 1327 aa12.3□□□□□ -0.44
SCAMP4-208ENST00000489554 PLXNA1Q9UIW2 1896 aa12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 A0A1W2PPC1 479 aa12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 ASB14A6NK59 587 aa12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 SH2B2O14492 632 aaPredicted RBP12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 HMGB1P09429 215 aaKnown RBP12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 AK2P54819 239 aa12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 CNTN2Q02246 1040 aa12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 SEC23AQ15436 765 aa12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 ASPRV1Q53RT3 343 aa12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 MUM1L1Q5H9M0 696 aa12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 RALYLQ86SE5 291 aaKnown RBP12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 CCDC144CPQ8IYA2 1237 aa12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 CYP39A1Q9NYL5 469 aa12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 RBM27Q9P2N5 1060 aaKnown RBP12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 ZMYND8Q9ULU4 1186 aaPredicted RBP12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 ALPK3Q96L96 1907 aa12.29□□□□□ -0.44
SCAMP4-208ENST00000489554 SOWAHBA6NEL2 793 aa12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 DUSP11O75319 330 aaKnown RBP12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 PGK1P00558 417 aa12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 MCM5P33992 734 aa12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 ADCYAP1R1P41586 468 aa12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 ATN1P54259 1190 aaPredicted RBP12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 IFIT1BQ5T764 474 aaKnown RBP12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 NSMFQ6X4W1 530 aa12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 SLC39A5Q6ZMH5 540 aa12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 SNX21Q969T3 373 aa12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 TSEN34Q9BSV6 310 aaKnown RBP12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 LY9Q9HBG7 655 aa12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 PDRG1Q9NUG6 133 aa12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 ADD3Q9UEY8 706 aaKnown RBP12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 PHF24Q9UPV7 400 aa12.28□□□□□ -0.44
SCAMP4-208ENST00000489554 LOC102724159A0A0B4J2E5 919 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 ADAMTS4O75173 837 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 LARGE1O95461 756 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 PARP1P09874 1014 aaKnown RBP12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 GOLGA8HP0CJ92 632 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 SYN1P17600 705 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 BMP8BP34820 402 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 FXR1P51114 621 aaKnown RBP eCLIP12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 EVCP57679 992 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 RTP1P59025 263 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 SNX17Q15036 470 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 PWP2Q15269 919 aaKnown RBP12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 CCDC144BQ3MJ40 725 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 C1orf53Q5VUE5 145 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 Q6ZUG5 572 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 GDF15Q99988 308 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 MTA3Q9BTC8 594 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 MAF1Q9H063 256 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 KATNBL1Q9H079 304 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms