RNA–Protein interactions for RNA: ENST00000488632.1

LBR-208, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-208ENST00000488632 NKD1Q969G9 470 aa3.04□□□□□ -1.92
LBR-208ENST00000488632 MISP3Q96FF7 219 aa3.04□□□□□ -1.92
LBR-208ENST00000488632 WDR18Q9BV38 432 aa3.04□□□□□ -1.92
LBR-208ENST00000488632 EMILIN2Q9BXX0 1053 aa3.04□□□□□ -1.92
LBR-208ENST00000488632 KRTAP4-9Q9BYQ8 210 aa3.04□□□□□ -1.92
LBR-208ENST00000488632 PNNQ9H307 717 aaKnown RBP3.04□□□□□ -1.92
LBR-208ENST00000488632 ZSWIM4Q9H7M6 989 aa3.04□□□□□ -1.92
LBR-208ENST00000488632 SIRPGQ9P1W8 387 aa3.04□□□□□ -1.92
LBR-208ENST00000488632 GPN3Q9UHW5 284 aaPredicted RBP3.04□□□□□ -1.92
LBR-208ENST00000488632 CYP8B1Q9UNU6 501 aa3.04□□□□□ -1.92
LBR-208ENST00000488632 EFR3BQ9Y2G0 817 aa3.04□□□□□ -1.92
LBR-208ENST00000488632 R3HCC1Q9Y3T6 440 aaKnown RBP3.04□□□□□ -1.92
LBR-208ENST00000488632 DAGLAQ9Y4D2 1042 aa3.04□□□□□ -1.92
LBR-208ENST00000488632 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.04□□□□□ -1.92
LBR-208ENST00000488632 PNPLA6Q8IY17 1366 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 TAF1LQ8IZX4 1826 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 MAP3K19Q56UN5 1328 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 SPATA31A3Q5VYP0 1347 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 BIN1O00499 593 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 ENC1O14682 589 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 TMPRSS2O15393 492 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 DYNC1LI2O43237 492 aaPredicted RBP3.03□□□□□ -1.92
LBR-208ENST00000488632 AOC2O75106 756 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 FBXO24O75426 580 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 PF4P02776 101 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 U2AF1L5P0DN76 240 aaPredicted RBP3.03□□□□□ -1.92
LBR-208ENST00000488632 IMPDH2P12268 514 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 NME2P22392 152 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 ASPAP45381 313 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 NASPP49321 788 aaPredicted RBP3.03□□□□□ -1.92
LBR-208ENST00000488632 AMPHP49418 695 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 U2AF1Q01081 240 aaKnown RBP eCLIP3.03□□□□□ -1.92
LBR-208ENST00000488632 APOBRQ0VD83 1088 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 AP3B2Q13367 1082 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 RRS1Q15050 365 aaKnown RBP3.03□□□□□ -1.92
LBR-208ENST00000488632 MAP3K11Q16584 847 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 TNNI3KQ59H18 835 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 OGFOD3Q6PK18 319 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 FAM196AQ6ZSG2 479 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 LRP10Q7Z4F1 713 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 SLITRK4Q8IW52 837 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 NGEFQ8N5V2 710 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 GOLM1Q8NBJ4 401 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 MRFAP1L1Q96HT8 127 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 EAF1Q96JC9 268 aaPredicted RBP3.03□□□□□ -1.92
LBR-208ENST00000488632 LRRC3Q9BY71 257 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 TRIM55Q9BYV6 548 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 MIR1-1HGQ9H1L0 117 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 LGR6Q9HBX8 967 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 RAD18Q9NS91 495 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 POLKQ9UBT6 870 aa3.03□□□□□ -1.92
LBR-208ENST00000488632 BTAF1O14981 1849 aa3.03□□□□□ -1.93
LBR-208ENST00000488632 NCAPD2Q15021 1401 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 ARFGEF2Q9Y6D5 1785 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 CPDO75976 1380 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 KDRP35968 1356 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 LRP6O75581 1613 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 TOM1O60784 492 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 BPNT1O95861 308 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 CELA3AP09093 270 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 FUT4P22083 530 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 GARTP22102 1010 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 ZNF165P49910 485 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 ZNF157P51786 506 aaPredicted RBP3.02□□□□□ -1.93
LBR-208ENST00000488632 CDK5R2Q13319 367 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 MPP2Q14168 576 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 PDE3AQ14432 1141 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 CWF19L2Q2TBE0 894 aaKnown RBP3.02□□□□□ -1.93
LBR-208ENST00000488632 CYP27C1Q4G0S4 372 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 ZNF648Q5T619 568 aaPredicted RBP3.02□□□□□ -1.93
LBR-208ENST00000488632 PCNX4Q63HM2 1172 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 ZNF746Q6NUN9 644 aaPredicted RBP3.02□□□□□ -1.93
LBR-208ENST00000488632 SPRED2Q7Z698 418 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 ATG4DQ86TL0 474 aaPredicted RBP3.02□□□□□ -1.93
LBR-208ENST00000488632 CCDC146Q8IYE0 955 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 REXO1Q8N1G1 1221 aaKnown RBP3.02□□□□□ -1.93
LBR-208ENST00000488632 PLD6Q8N2A8 252 aaKnown RBP3.02□□□□□ -1.93
LBR-208ENST00000488632 OR6P1Q8NGX9 317 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 GATAD2BQ8WXI9 593 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 FAM168AQ92567 244 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 RUNDC1Q96C34 613 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 CRBNQ96SW2 442 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 SRRTQ9BXP5 876 aaKnown RBP3.02□□□□□ -1.93
LBR-208ENST00000488632 TMX1Q9H3N1 280 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 ZNF408Q9H9D4 720 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 RC3H2Q9HBD1 1191 aaKnown RBP3.02□□□□□ -1.93
LBR-208ENST00000488632 GINM1Q9NU53 330 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 PRKAG3Q9UGI9 489 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 PPP1R9AQ9ULJ8 1098 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 TLR6Q9Y2C9 796 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 NUP98P52948 1817 aa3.02□□□□□ -1.93
LBR-208ENST00000488632 COL5A2P05997 1499 aaPredicted RBP3.02□□□□□ -1.93
LBR-208ENST00000488632 COL5A3P25940 1745 aaPredicted RBP3.02□□□□□ -1.93
LBR-208ENST00000488632 NHSQ6T4R5 1651 aa3.01□□□□□ -1.93
LBR-208ENST00000488632 KIAA0232Q92628 1395 aa3.01□□□□□ -1.93
LBR-208ENST00000488632 IGSF1Q8N6C5 1336 aa3.01□□□□□ -1.93
LBR-208ENST00000488632 ANKRD62A6NC57 917 aa3.01□□□□□ -1.93
LBR-208ENST00000488632 APAF1O14727 1248 aa3.01□□□□□ -1.93
LBR-208ENST00000488632 GCP02774 474 aa3.01□□□□□ -1.93
LBR-208ENST00000488632 FAM87AP0C7U9 286 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms