RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 STOX1Q6ZVD7 989 aa20.76■□□□□ 0.91
ITGB1-215ENST00000488494 MAP4K1Q92918 833 aa20.76■□□□□ 0.91
ITGB1-215ENST00000488494 ESYT1Q9BSJ8 1104 aa20.76■□□□□ 0.91
ITGB1-215ENST00000488494 ABHD16BQ9H3Z7 469 aa20.76■□□□□ 0.91
ITGB1-215ENST00000488494 PCDH10Q9P2E7 1040 aa20.76■□□□□ 0.91
ITGB1-215ENST00000488494 E7EWF7 191 aa20.75■□□□□ 0.91
ITGB1-215ENST00000488494 PARP1P09874 1014 aaKnown RBP20.75■□□□□ 0.91
ITGB1-215ENST00000488494 ADCYAP1R1P41586 468 aa20.75■□□□□ 0.91
ITGB1-215ENST00000488494 CDC37Q16543 378 aaPredicted RBP20.75■□□□□ 0.91
ITGB1-215ENST00000488494 RNF180Q86T96 592 aa20.75■□□□□ 0.91
ITGB1-215ENST00000488494 CLEC4DQ8WXI8 215 aa20.75■□□□□ 0.91
ITGB1-215ENST00000488494 FERMT2Q96AC1 680 aa20.75■□□□□ 0.91
ITGB1-215ENST00000488494 PURBQ96QR8 312 aaKnown RBP20.75■□□□□ 0.91
ITGB1-215ENST00000488494 KATNBL1Q9H079 304 aa20.75■□□□□ 0.91
ITGB1-215ENST00000488494 PRO3102Q9H379 93 aa20.75■□□□□ 0.91
ITGB1-215ENST00000488494 PNMA2Q9UL42 364 aa20.75■□□□□ 0.91
ITGB1-215ENST00000488494 TRIOBPQ9H2D6 2365 aa20.75■□□□□ 0.91
ITGB1-215ENST00000488494 PTPDC1A2A3K4 754 aa20.74■□□□□ 0.91
ITGB1-215ENST00000488494 ASB14A6NK59 587 aa20.74■□□□□ 0.91
ITGB1-215ENST00000488494 ADCY6O43306 1168 aa20.74■□□□□ 0.91
ITGB1-215ENST00000488494 ADAMTS4O75173 837 aa20.74■□□□□ 0.91
ITGB1-215ENST00000488494 RTP1P59025 263 aa20.74■□□□□ 0.91
ITGB1-215ENST00000488494 BAATQ14032 418 aaPredicted RBP20.74■□□□□ 0.91
ITGB1-215ENST00000488494 CCDC144BQ3MJ40 725 aa20.74■□□□□ 0.91
ITGB1-215ENST00000488494 USH1GQ495M9 461 aa20.74■□□□□ 0.91
ITGB1-215ENST00000488494 KIAA1211Q6ZU35 1233 aa20.74■□□□□ 0.91
ITGB1-215ENST00000488494 NCOA7Q8NI08 942 aa20.74■□□□□ 0.91
ITGB1-215ENST00000488494 PHF24Q9UPV7 400 aa20.74■□□□□ 0.91
ITGB1-215ENST00000488494 SMCHD1A6NHR9 2005 aa20.73■□□□□ 0.91
ITGB1-215ENST00000488494 DHX16O60231 1041 aaKnown RBP20.73■□□□□ 0.91
ITGB1-215ENST00000488494 ADGRF4Q8IZF3 695 aa20.73■□□□□ 0.91
ITGB1-215ENST00000488494 CCDC136Q96JN2 1154 aa20.73■□□□□ 0.91
ITGB1-215ENST00000488494 LSG1Q9H089 658 aaKnown RBP20.73■□□□□ 0.91
ITGB1-215ENST00000488494 ATP11BQ9Y2G3 1177 aa20.73■□□□□ 0.91
ITGB1-215ENST00000488494 IFIT3O14879 490 aaKnown RBP20.72■□□□□ 0.91
ITGB1-215ENST00000488494 DUSP11O75319 330 aaKnown RBP20.72■□□□□ 0.91
ITGB1-215ENST00000488494 CALML3P27482 149 aa20.72■□□□□ 0.91
ITGB1-215ENST00000488494 CHST3Q7LGC8 479 aa20.72■□□□□ 0.91
ITGB1-215ENST00000488494 FBXO16Q8IX29 292 aaPredicted RBP20.72■□□□□ 0.91
ITGB1-215ENST00000488494 ANO2Q9NQ90 1003 aa20.72■□□□□ 0.91
ITGB1-215ENST00000488494 A0A1W2PQ45 241 aaPredicted RBP20.71■□□□□ 0.91
ITGB1-215ENST00000488494 A0A1W2PQY0 241 aa20.71■□□□□ 0.91
ITGB1-215ENST00000488494 ERICH2A1L162 156 aa20.71■□□□□ 0.91
ITGB1-215ENST00000488494 MYADML2A6NDP7 307 aa20.71■□□□□ 0.91
ITGB1-215ENST00000488494 MAGEA10P43363 369 aaPredicted RBP20.71■□□□□ 0.91
ITGB1-215ENST00000488494 FXR1P51114 621 aaKnown RBP eCLIP20.71■□□□□ 0.91
ITGB1-215ENST00000488494 ANTXR2P58335 489 aa20.71■□□□□ 0.91
ITGB1-215ENST00000488494 SART3Q15020 963 aaKnown RBP20.71■□□□□ 0.91
ITGB1-215ENST00000488494 TRIM60Q495X7 471 aa20.71■□□□□ 0.91
ITGB1-215ENST00000488494 SLC39A5Q6ZMH5 540 aa20.71■□□□□ 0.91
ITGB1-215ENST00000488494 RNF207Q6ZRF8 634 aa20.71■□□□□ 0.91
ITGB1-215ENST00000488494 MB21D2Q8IYB1 491 aaPredicted RBP20.71■□□□□ 0.91
ITGB1-215ENST00000488494 STAG2Q8N3U4 1231 aa20.71■□□□□ 0.91
ITGB1-215ENST00000488494 SENP2Q9HC62 589 aa20.71■□□□□ 0.91
ITGB1-215ENST00000488494 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.7■□□□□ 0.9
ITGB1-215ENST00000488494 C6orf222P0C671 652 aaPredicted RBP20.7■□□□□ 0.9
ITGB1-215ENST00000488494 ALDH5A1P51649 535 aaPredicted RBP20.7■□□□□ 0.9
ITGB1-215ENST00000488494 RPS6P62753 249 aaKnown RBP20.7■□□□□ 0.9
ITGB1-215ENST00000488494 WTAPQ15007 396 aa20.7■□□□□ 0.9
ITGB1-215ENST00000488494 SNX17Q15036 470 aa20.7■□□□□ 0.9
ITGB1-215ENST00000488494 QRICH1Q2TAL8 776 aa20.7■□□□□ 0.9
ITGB1-215ENST00000488494 TMEM67Q5HYA8 995 aa20.7■□□□□ 0.9
ITGB1-215ENST00000488494 EEPD1Q7L9B9 569 aa20.7■□□□□ 0.9
ITGB1-215ENST00000488494 GDF15Q99988 308 aa20.7■□□□□ 0.9
ITGB1-215ENST00000488494 JMJD4Q9H9V9 463 aa20.7■□□□□ 0.9
ITGB1-215ENST00000488494 ADD3Q9UEY8 706 aaKnown RBP20.7■□□□□ 0.9
ITGB1-215ENST00000488494 ABCB11O95342 1321 aa20.7■□□□□ 0.9
ITGB1-215ENST00000488494 ACLYP53396 1101 aa20.69■□□□□ 0.9
ITGB1-215ENST00000488494 IRX5P78411 483 aaPredicted RBP20.69■□□□□ 0.9
ITGB1-215ENST00000488494 NOL8Q76FK4 1167 aaKnown RBP20.69■□□□□ 0.9
ITGB1-215ENST00000488494 KLHDC9Q8NEP7 349 aa20.69■□□□□ 0.9
ITGB1-215ENST00000488494 MORC4Q8TE76 937 aa20.69■□□□□ 0.9
ITGB1-215ENST00000488494 UPF3AQ9H1J1 476 aaKnown RBP20.69■□□□□ 0.9
ITGB1-215ENST00000488494 VAT1LQ9HCJ6 419 aa20.69■□□□□ 0.9
ITGB1-215ENST00000488494 MAD2L2Q9UI95 211 aa20.69■□□□□ 0.9
ITGB1-215ENST00000488494 LTBP2Q14767 1821 aa20.69■□□□□ 0.9
ITGB1-215ENST00000488494 KLRF2D3W0D1 207 aa20.68■□□□□ 0.9
ITGB1-215ENST00000488494 SLC27A2O14975 620 aa20.68■□□□□ 0.9
ITGB1-215ENST00000488494 CST5P28325 142 aaPredicted RBP20.68■□□□□ 0.9
ITGB1-215ENST00000488494 TNFAIP2Q03169 654 aa20.68■□□□□ 0.9
ITGB1-215ENST00000488494 GRM4Q14833 912 aa20.68■□□□□ 0.9
ITGB1-215ENST00000488494 TSEN34Q9BSV6 310 aaKnown RBP20.68■□□□□ 0.9
ITGB1-215ENST00000488494 SPC25Q9HBM1 224 aa20.68■□□□□ 0.9
ITGB1-215ENST00000488494 VTA1Q9NP79 307 aa20.68■□□□□ 0.9
ITGB1-215ENST00000488494 PDGFCQ9NRA1 345 aa20.68■□□□□ 0.9
ITGB1-215ENST00000488494 MOXD2PA6NHM9 499 aa20.67■□□□□ 0.9
ITGB1-215ENST00000488494 CDC45O75419 566 aa20.67■□□□□ 0.9
ITGB1-215ENST00000488494 NEFLP07196 543 aa20.67■□□□□ 0.9
ITGB1-215ENST00000488494 PTGS1P23219 599 aa20.67■□□□□ 0.9
ITGB1-215ENST00000488494 GJA9P57773 515 aa20.67■□□□□ 0.9
ITGB1-215ENST00000488494 KCNA10Q16322 511 aa20.67■□□□□ 0.9
ITGB1-215ENST00000488494 CREB3L3Q68CJ9 461 aa20.67■□□□□ 0.9
ITGB1-215ENST00000488494 CCSAPQ6IQ19 270 aaPredicted RBP20.67■□□□□ 0.9
ITGB1-215ENST00000488494 TLK2Q86UE8 772 aa20.67■□□□□ 0.9
ITGB1-215ENST00000488494 FBXO11Q86XK2 927 aa20.67■□□□□ 0.9
ITGB1-215ENST00000488494 PRDM5Q9NQX1 630 aaPredicted RBP20.67■□□□□ 0.9
ITGB1-215ENST00000488494 LOC102724159A0A0B4J2E5 919 aa20.66■□□□□ 0.9
ITGB1-215ENST00000488494 A0A1W2PPC1 479 aa20.66■□□□□ 0.9
ITGB1-215ENST00000488494 PALM3A6NDB9 673 aaPredicted RBP20.66■□□□□ 0.9
ITGB1-215ENST00000488494 PRC1O43663 620 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms