RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 VAT1LQ9HCJ6 419 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 SEC63Q9UGP8 760 aaKnown RBP10.88□□□□□ -0.67
LCN2-205ENST00000487719 ZNF536O15090 1300 aa10.87□□□□□ -0.67
LCN2-205ENST00000487719 SH2B2O14492 632 aaPredicted RBP10.87□□□□□ -0.67
LCN2-205ENST00000487719 CYP2C19P33261 490 aa10.87□□□□□ -0.67
LCN2-205ENST00000487719 HSPA4P34932 840 aa10.87□□□□□ -0.67
LCN2-205ENST00000487719 SNAP25P60880 206 aa10.87□□□□□ -0.67
LCN2-205ENST00000487719 ZNF792Q3KQV3 632 aa10.87□□□□□ -0.67
LCN2-205ENST00000487719 RNF207Q6ZRF8 634 aa10.87□□□□□ -0.67
LCN2-205ENST00000487719 IGDCC4Q8TDY8 1250 aa10.87□□□□□ -0.67
LCN2-205ENST00000487719 JAKMIP1Q96N16 626 aaKnown RBP10.87□□□□□ -0.67
LCN2-205ENST00000487719 AMNQ9BXJ7 453 aa10.87□□□□□ -0.67
LCN2-205ENST00000487719 LY9Q9HBG7 655 aa10.87□□□□□ -0.67
LCN2-205ENST00000487719 A1CFQ9NQ94 594 aaKnown RBP10.87□□□□□ -0.67
LCN2-205ENST00000487719 FLRT1Q9NZU1 646 aa10.87□□□□□ -0.67
LCN2-205ENST00000487719 DDX20Q9UHI6 824 aaKnown RBP10.87□□□□□ -0.67
LCN2-205ENST00000487719 NAP1L2Q9ULW6 460 aaPredicted RBP10.87□□□□□ -0.67
LCN2-205ENST00000487719 MRPL11Q9Y3B7 192 aaKnown RBP10.87□□□□□ -0.67
LCN2-205ENST00000487719 LOC102724159A0A0B4J2E5 919 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 PALM3A6NDB9 673 aaPredicted RBP10.86□□□□□ -0.67
LCN2-205ENST00000487719 ZBTB5O15062 677 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 SEPT4O43236 478 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 RARBP10826 455 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 CYBAP13498 195 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 AKR1A1P14550 325 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 CCND3P30281 292 aaPredicted RBP10.86□□□□□ -0.67
LCN2-205ENST00000487719 ANTXR2P58335 489 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 TRIM32Q13049 653 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 PWP2Q15269 919 aaKnown RBP10.86□□□□□ -0.67
LCN2-205ENST00000487719 NECAB2Q7Z6G3 386 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 HOMER1Q86YM7 354 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 ARRDC4Q8NCT1 418 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 RRP36Q96EU6 259 aaKnown RBP10.86□□□□□ -0.67
LCN2-205ENST00000487719 ABHD16BQ9H3Z7 469 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 SPC25Q9HBM1 224 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 RBM28Q9NW13 759 aaKnown RBP10.86□□□□□ -0.67
LCN2-205ENST00000487719 CYP39A1Q9NYL5 469 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 MAD2L2Q9UI95 211 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 TAF6LQ9Y6J9 622 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 LRRC37A2A6NM11 1700 aa10.86□□□□□ -0.67
LCN2-205ENST00000487719 DNAJC25-GNG10A0A024R161 153 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 CCDC196A0A1B0GTZ2 297 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 KBTBD13C9JR72 458 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 CASTP20810 708 aaKnown RBP10.85□□□□□ -0.67
LCN2-205ENST00000487719 CALML3P27482 149 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 TROAPQ12815 778 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 QRICH1Q2TAL8 776 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 MAMDC4Q6UXC1 1216 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 ARMCX2Q7L311 632 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 SGMS1Q86VZ5 419 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 MICU3Q86XE3 530 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 SAMD3Q8N6K7 520 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 RGS22Q8NE09 1264 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 CRISPLD2Q9H0B8 497 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 JMJD4Q9H9V9 463 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 ZHX1Q9UKY1 873 aaPredicted RBP10.85□□□□□ -0.67
LCN2-205ENST00000487719 CYP46A1Q9Y6A2 500 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 ALPK3Q96L96 1907 aa10.85□□□□□ -0.67
LCN2-205ENST00000487719 KAT6AQ92794 2004 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 PNMA6FA0A0J9YX94 578 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 NFIBO00712 420 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 ZBTB43O43298 467 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 MYCNP04198 464 aaPredicted RBP10.84□□□□□ -0.67
LCN2-205ENST00000487719 SMARCA1P28370 1054 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 RCAN1P53805 252 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 PDE4DQ08499 809 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 PPP2R5BQ15173 497 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 MUM1L1Q5H9M0 696 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 NOL8Q76FK4 1167 aaKnown RBP10.84□□□□□ -0.67
LCN2-205ENST00000487719 RASEFQ8IZ41 740 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 STAG2Q8N3U4 1231 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 FAM133AQ8N9E0 248 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 DNERQ8NFT8 737 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 CUL5Q93034 780 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 SHISA4Q96DD7 197 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 MYL10Q9BUA6 226 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 SPZ1Q9BXG8 430 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 LRRC2Q9BYS8 371 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 CPVLQ9H3G5 476 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.84□□□□□ -0.67
LCN2-205ENST00000487719 MAP3K20Q9NYL2 800 aaKnown RBP10.84□□□□□ -0.67
LCN2-205ENST00000487719 OGDHLQ9ULD0 1010 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 FAM184BQ9ULE4 1060 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 PCDHA1Q9Y5I3 950 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 SNX14Q9Y5W7 946 aa10.84□□□□□ -0.67
LCN2-205ENST00000487719 MKI67P46013 3256 aaKnown RBP10.84□□□□□ -0.67
LCN2-205ENST00000487719 RPS6P62753 249 aaKnown RBP10.83□□□□□ -0.68
LCN2-205ENST00000487719 BAATQ14032 418 aaPredicted RBP10.83□□□□□ -0.68
LCN2-205ENST00000487719 RTN1Q16799 776 aa10.83□□□□□ -0.68
LCN2-205ENST00000487719 RNF180Q86T96 592 aa10.83□□□□□ -0.68
LCN2-205ENST00000487719 CCDC144CPQ8IYA2 1237 aa10.83□□□□□ -0.68
LCN2-205ENST00000487719 FANCBQ8NB91 859 aa10.83□□□□□ -0.68
LCN2-205ENST00000487719 DPF3Q92784 378 aa10.83□□□□□ -0.68
LCN2-205ENST00000487719 KCNB2Q92953 911 aa10.83□□□□□ -0.68
LCN2-205ENST00000487719 RIOX1Q9H6W3 641 aa10.83□□□□□ -0.68
LCN2-205ENST00000487719 SENP2Q9HC62 589 aa10.83□□□□□ -0.68
LCN2-205ENST00000487719 XPNPEP3Q9NQH7 507 aa10.83□□□□□ -0.68
LCN2-205ENST00000487719 NR2E3Q9Y5X4 410 aa10.83□□□□□ -0.68
LCN2-205ENST00000487719 TNRC18O15417 2968 aaPredicted RBP10.82□□□□□ -0.68
LCN2-205ENST00000487719 KLF18A0A0U1RQI7 1052 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms