RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 RIPOR3Q96MK2 946 aa9.42□□□□□ -0.9
RTCB-205ENST00000487704 SAMD11Q96NU1 681 aa9.42□□□□□ -0.9
RTCB-205ENST00000487704 C17orf80Q9BSJ5 609 aa9.42□□□□□ -0.9
RTCB-205ENST00000487704 AATFQ9NY61 560 aaKnown RBP eCLIP9.42□□□□□ -0.9
RTCB-205ENST00000487704 RAI14Q9P0K7 980 aa9.42□□□□□ -0.9
RTCB-205ENST00000487704 HMG20BQ9P0W2 317 aa9.42□□□□□ -0.9
RTCB-205ENST00000487704 ZNF214Q9UL59 606 aaPredicted RBP9.42□□□□□ -0.9
RTCB-205ENST00000487704 INSL6Q9Y581 213 aa9.42□□□□□ -0.9
RTCB-205ENST00000487704 FAM208BQ5VWN6 2430 aa9.42□□□□□ -0.9
RTCB-205ENST00000487704 CEP250Q9BV73 2442 aa9.42□□□□□ -0.9
RTCB-205ENST00000487704 PTPRSQ13332 1948 aa9.41□□□□□ -0.9
RTCB-205ENST00000487704 ABHD14A-ACY1A0A1B0GW23 586 aa9.41□□□□□ -0.9
RTCB-205ENST00000487704 EYA4O95677 639 aa9.41□□□□□ -0.9
RTCB-205ENST00000487704 TIMM10P62072 90 aa9.41□□□□□ -0.9
RTCB-205ENST00000487704 DEFB103AP81534 67 aa9.41□□□□□ -0.9
RTCB-205ENST00000487704 SEPT2Q15019 361 aa9.41□□□□□ -0.9
RTCB-205ENST00000487704 TBC1D9Q6ZT07 1266 aa9.41□□□□□ -0.9
RTCB-205ENST00000487704 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.41□□□□□ -0.9
RTCB-205ENST00000487704 SAP30BPQ9UHR5 308 aaKnown RBP9.41□□□□□ -0.9
RTCB-205ENST00000487704 Q9Y3F1 56 aa9.41□□□□□ -0.9
RTCB-205ENST00000487704 CDK5RAP2Q96SN8 1893 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 COL11A1P12107 1806 aaPredicted RBP9.4□□□□□ -0.9
RTCB-205ENST00000487704 VWA5AO00534 786 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 EFCAB14O75071 495 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 ICAM3P32942 547 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 IL15P40933 162 aaPredicted RBP9.4□□□□□ -0.9
RTCB-205ENST00000487704 BFSP2Q13515 415 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 MVPQ14764 893 aaKnown RBP9.4□□□□□ -0.9
RTCB-205ENST00000487704 GPNMBQ14956 572 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 EPC2Q52LR7 807 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.4□□□□□ -0.9
RTCB-205ENST00000487704 ARMCX2Q7L311 632 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 TLK2Q86UE8 772 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 SPATA5Q8NB90 893 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 SP7Q8TDD2 431 aaPredicted RBP9.4□□□□□ -0.9
RTCB-205ENST00000487704 FGD4Q96M96 766 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 CRBNQ96SW2 442 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 AP5M1Q9H0R1 490 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 SEMA4AQ9H3S1 761 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 CD207Q9UJ71 328 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 FRYLO94915 3013 aa9.4□□□□□ -0.9
RTCB-205ENST00000487704 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.39□□□□□ -0.91
RTCB-205ENST00000487704 WDR46O15213 610 aaKnown RBP9.39□□□□□ -0.91
RTCB-205ENST00000487704 DYNC1LI2O43237 492 aaPredicted RBP9.39□□□□□ -0.91
RTCB-205ENST00000487704 IGSF3O75054 1194 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 PARNO95453 639 aaKnown RBP9.39□□□□□ -0.91
RTCB-205ENST00000487704 SHMT1P34896 483 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 MCAMP43121 646 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 HTRA4P83105 476 aaPredicted RBP9.39□□□□□ -0.91
RTCB-205ENST00000487704 GPM6BQ13491 265 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 CLUL1Q15846 466 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 NAA16Q6N069 864 aaPredicted RBP9.39□□□□□ -0.91
RTCB-205ENST00000487704 CNKSR3Q6P9H4 555 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 NOL8Q76FK4 1167 aaKnown RBP9.39□□□□□ -0.91
RTCB-205ENST00000487704 TTC6Q86TZ1 520 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 TMEM105Q8N8V8 129 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 REPS2Q8NFH8 660 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 XAGE2Q96GT9 111 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 PCGF6Q9BYE7 350 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 LRP2BPQ9P2M1 347 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 TMX2Q9Y320 296 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 GPR179Q6PRD1 2367 aa9.39□□□□□ -0.91
RTCB-205ENST00000487704 FOCADQ5VW36 1801 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 IL16Q14005 1332 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 MYO7AQ13402 2215 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 TBX10O75333 385 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 PDGFBP01127 241 aaPredicted RBP9.38□□□□□ -0.91
RTCB-205ENST00000487704 CXCL10P02778 98 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 HYAL1Q12794 435 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 PTPN21Q16825 1174 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 CCDC27Q2M243 656 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 SIAH1Q8IUQ4 282 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 CCDC144CPQ8IYA2 1237 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 KIAA2013Q8IYS2 634 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 MSLNLQ96KJ4 702 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 TEX13BQ9BXU2 312 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 USP44Q9H0E7 712 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 VCPKMTQ9H867 229 aa9.38□□□□□ -0.91
RTCB-205ENST00000487704 RALYQ9UKM9 306 aaKnown RBP9.38□□□□□ -0.91
RTCB-205ENST00000487704 SPTBN2O15020 2390 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 SETXQ7Z333 2677 aaKnown RBP9.37□□□□□ -0.91
RTCB-205ENST00000487704 LMNAP02545 664 aaKnown RBP9.37□□□□□ -0.91
RTCB-205ENST00000487704 SMPD1P17405 629 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 PTPN11Q06124 597 aaPredicted RBP9.37□□□□□ -0.91
RTCB-205ENST00000487704 MKRN4PQ13434 485 aaPredicted RBP9.37□□□□□ -0.91
RTCB-205ENST00000487704 ADAM15Q13444 863 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 IKBKEQ14164 716 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 IQSEC1Q6DN90 963 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 NFRKBQ6P4R8 1299 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 PI16Q6UXB8 463 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 ADGRA1Q86SQ6 560 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 SPICE1Q8N0Z3 855 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 SMRP1Q8NCR6 262 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 AFAP1L1Q8TED9 768 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 PHF7Q9BWX1 381 aaPredicted RBP9.37□□□□□ -0.91
RTCB-205ENST00000487704 POLR3EQ9NVU0 708 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 PPP1R9AQ9ULJ8 1098 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 PCDHGC5Q9Y5F6 944 aa9.37□□□□□ -0.91
RTCB-205ENST00000487704 PARP14Q460N5 1801 aa9.36□□□□□ -0.91
RTCB-205ENST00000487704 ATP2A1O14983 1001 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms