RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 ADORA2AP29274 412 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 SHMT1P34896 483 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 PLS1Q14651 629 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 SEPT2Q15019 361 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 GJC2Q5T442 439 aaPredicted RBP6.72□□□□□ -1.33
MACF1-221ENST00000487656 SLC9C2Q5TAH2 1124 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 RNF20Q5VTR2 975 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 AACSQ86V21 672 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 NCAPG2Q86XI2 1143 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 ITPRIPQ8IWB1 547 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.72□□□□□ -1.33
MACF1-221ENST00000487656 ABRAQ8N0Z2 381 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 FAM174AQ8TBP5 190 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 FAM161BQ96MY7 647 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 MOV10L1Q9BXT6 1211 aaKnown RBP6.72□□□□□ -1.33
MACF1-221ENST00000487656 SPATC1LQ9H0A9 340 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 SH2D4AQ9H788 454 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 VRTNQ9H8Y1 702 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 ARHGEF10LQ9HCE6 1279 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 MCM9Q9NXL9 1143 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 SWAP70Q9UH65 585 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 CDV3Q9UKY7 258 aaKnown RBP6.72□□□□□ -1.33
MACF1-221ENST00000487656 CUL9Q8IWT3 2517 aa6.72□□□□□ -1.33
MACF1-221ENST00000487656 COBLO75128 1261 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 FLOT1O75955 427 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 SLC25A27O95847 323 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 FCER1AP12319 257 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 ERCC3P19447 782 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 GUCY1A2P33402 732 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 ADCYAP1R1P41586 468 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 SKOR1P84550 965 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 GABPAQ06546 454 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 SHHQ15465 462 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 NBPF20Q3BBV1 942 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 MAP7D1Q3KQU3 841 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 TMEM179Q6ZVK1 233 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 AMOTL1Q8IY63 956 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 PHTF2Q8N3S3 785 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 TRPV1Q8NER1 839 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 CCDC17Q96LX7 622 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 RIOK1Q9BRS2 568 aaKnown RBP6.71□□□□□ -1.34
MACF1-221ENST00000487656 C1QTNF2Q9BXJ5 285 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 COL25A1Q9BXS0 654 aaPredicted RBP6.71□□□□□ -1.34
MACF1-221ENST00000487656 ANTXR1Q9H6X2 564 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 PRDM5Q9NQX1 630 aaPredicted RBP6.71□□□□□ -1.34
MACF1-221ENST00000487656 TLR7Q9NYK1 1049 aaKnown RBP6.71□□□□□ -1.34
MACF1-221ENST00000487656 NRBP1Q9UHY1 535 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 TACC3Q9Y6A5 838 aa6.71□□□□□ -1.34
MACF1-221ENST00000487656 LAMA3Q16787 3333 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 A0A1W2PRG0 241 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 LZTS3O60299 673 aaPredicted RBP6.7□□□□□ -1.34
MACF1-221ENST00000487656 IGHA2P01877 340 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 RARBP10826 455 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 SLC19A1P41440 591 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 SMAD3P84022 425 aaKnown RBP6.7□□□□□ -1.34
MACF1-221ENST00000487656 PDE4CQ08493 712 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 LRRC41Q15345 812 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 PRAMEF19Q5SWL8 479 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 C1orf53Q5VUE5 145 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 ANO1Q5XXA6 986 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 LIAT1Q6ZQX7 453 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 RNF180Q86T96 592 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 PLEKHM2Q8IWE5 1019 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 CLASRPQ8N2M8 674 aaKnown RBP6.7□□□□□ -1.34
MACF1-221ENST00000487656 PLPP7Q8NBV4 271 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 EHBP1Q8NDI1 1231 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 BADQ92934 168 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 FERMT2Q96AC1 680 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 GUCD1Q96NT3 240 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 CDX2Q99626 313 aaPredicted RBP6.7□□□□□ -1.34
MACF1-221ENST00000487656 SEMA6BQ9H3T3 888 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 DCP1AQ9NPI6 582 aaPredicted RBP6.7□□□□□ -1.34
MACF1-221ENST00000487656 ATP8A2Q9NTI2 1148 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 EXOC6BQ9Y2D4 811 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 TMX2Q9Y320 296 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 ZNF236Q9UL36 1845 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 NAV1Q8NEY1 1877 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 PLXNA1Q9UIW2 1896 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 ZNF532Q9HCE3 1301 aa6.7□□□□□ -1.34
MACF1-221ENST00000487656 BAZ2AQ9UIF9 1905 aaKnown RBP6.7□□□□□ -1.34
MACF1-221ENST00000487656 COL11A1P12107 1806 aaPredicted RBP6.69□□□□□ -1.34
MACF1-221ENST00000487656 LTBP2Q14767 1821 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 A0A0C4DFX4 3053 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 GOLIM4O00461 696 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 WDR46O15213 610 aaKnown RBP6.69□□□□□ -1.34
MACF1-221ENST00000487656 HMMRO75330 724 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 IFIT2P09913 472 aaKnown RBP6.69□□□□□ -1.34
MACF1-221ENST00000487656 RAG1P15918 1043 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 PDE6AP16499 860 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 TLE2Q04725 743 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 ICA1Q05084 483 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 KCTD2Q14681 263 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 SNX17Q15036 470 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 TRIM60Q495X7 471 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 CEP85Q6P2H3 762 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 DEPDC4Q8N2C3 294 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 MAFAQ8NHW3 353 aaPredicted RBP6.69□□□□□ -1.34
MACF1-221ENST00000487656 RHPN1Q8TCX5 695 aa6.69□□□□□ -1.34
MACF1-221ENST00000487656 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.69□□□□□ -1.34
MACF1-221ENST00000487656 SDR42E1Q8WUS8 393 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms