RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 CLEC4DQ8WXI8 215 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 BRF1Q92994 677 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 CWC22Q9HCG8 908 aaKnown RBP13.56□□□□□ -0.24
CLIP2-207ENST00000487447 KLF18A0A0U1RQI7 1052 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 ZBTB5O15062 677 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 ZBTB43O43298 467 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 PPP1R11O60927 126 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-207ENST00000487447 ELNP15502 786 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 RBM25P49756 843 aaKnown RBP13.55□□□□□ -0.24
CLIP2-207ENST00000487447 FUT2Q10981 343 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 MUM1L1Q5H9M0 696 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 HABP4Q5JVS0 413 aaKnown RBP13.55□□□□□ -0.24
CLIP2-207ENST00000487447 ZNF467Q7Z7K2 595 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-207ENST00000487447 FAM133AQ8N9E0 248 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 RGS22Q8NE09 1264 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 NUP133Q8WUM0 1156 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 MAML3Q96JK9 1138 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 FGD4Q96M96 766 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 TRERF1Q96PN7 1200 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 A1CFQ9NQ94 594 aaKnown RBP13.55□□□□□ -0.24
CLIP2-207ENST00000487447 FAM217BQ9NTX9 383 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-207ENST00000487447 RBM28Q9NW13 759 aaKnown RBP13.55□□□□□ -0.24
CLIP2-207ENST00000487447 FLRT1Q9NZU1 646 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 PFASO15067 1338 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 ABCB11O95342 1321 aa13.55□□□□□ -0.24
CLIP2-207ENST00000487447 BRCA2P51587 3418 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 PLEKHA8P1O95397 391 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 INHAP05111 366 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 ALAS1P13196 640 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 RXRAP19793 462 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 APOBRQ0VD83 1088 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 CCL14Q16627 93 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 MAMDC4Q6UXC1 1216 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 SYNE3Q6ZMZ3 975 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 DPP9Q86TI2 863 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 MICU3Q86XE3 530 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 SRBD1Q8N5C6 995 aaKnown RBP13.54□□□□□ -0.24
CLIP2-207ENST00000487447 MSL3Q8N5Y2 521 aaKnown RBP13.54□□□□□ -0.24
CLIP2-207ENST00000487447 AMNQ9BXJ7 453 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 UPF3BQ9BZI7 483 aaKnown RBP13.54□□□□□ -0.24
CLIP2-207ENST00000487447 SLC5A4Q9NY91 659 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 CYP39A1Q9NYL5 469 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 CNTNAP5Q8WYK1 1306 aa13.54□□□□□ -0.24
CLIP2-207ENST00000487447 PNMA6FA0A0J9YX94 578 aa13.53□□□□□ -0.24
CLIP2-207ENST00000487447 NFIBO00712 420 aa13.53□□□□□ -0.24
CLIP2-207ENST00000487447 PGK2P07205 417 aa13.53□□□□□ -0.24
CLIP2-207ENST00000487447 TAL1P17542 331 aaPredicted RBP13.53□□□□□ -0.24
CLIP2-207ENST00000487447 UBXN2AP68543 259 aa13.53□□□□□ -0.24
CLIP2-207ENST00000487447 TRAF1Q13077 416 aa13.53□□□□□ -0.24
CLIP2-207ENST00000487447 RTN1Q16799 776 aa13.53□□□□□ -0.24
CLIP2-207ENST00000487447 FBXO11Q86XK2 927 aa13.53□□□□□ -0.24
CLIP2-207ENST00000487447 ANKRD35Q8N283 1001 aa13.53□□□□□ -0.24
CLIP2-207ENST00000487447 ZNF274Q96GC6 653 aaPredicted RBP13.53□□□□□ -0.24
CLIP2-207ENST00000487447 PIGSQ96S52 555 aa13.53□□□□□ -0.24
CLIP2-207ENST00000487447 KIF2CQ99661 725 aa13.53□□□□□ -0.24
CLIP2-207ENST00000487447 PAK6Q9NQU5 681 aaPredicted RBP13.53□□□□□ -0.24
CLIP2-207ENST00000487447 LOC102724159A0A0B4J2E5 919 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 GOLGA8AA7E2F4 631 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 GOLGA8BA8MQT2 603 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 OPLAHO14841 1288 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 PDIA3P30101 505 aaKnown RBP13.52□□□□□ -0.25
CLIP2-207ENST00000487447 CDC27P30260 824 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 TRIM32Q13049 653 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 PWP2Q15269 919 aaKnown RBP13.52□□□□□ -0.25
CLIP2-207ENST00000487447 CCDC144CPQ8IYA2 1237 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 SAMD3Q8N6K7 520 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 DDX11Q96FC9 970 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 VAT1LQ9HCJ6 419 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 HOMER2Q9NSB8 354 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 PDRG1Q9NUG6 133 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 NRBP1Q9UHY1 535 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 ASTN1O14525 1302 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 SYNGAP1Q96PV0 1343 aa13.52□□□□□ -0.25
CLIP2-207ENST00000487447 BAZ2BQ9UIF8 2168 aaKnown RBP13.51□□□□□ -0.25
CLIP2-207ENST00000487447 MCM3APO60318 1980 aa13.51□□□□□ -0.25
CLIP2-207ENST00000487447 RPTORQ8N122 1335 aa13.51□□□□□ -0.25
CLIP2-207ENST00000487447 SOWAHBA6NEL2 793 aa13.51□□□□□ -0.25
CLIP2-207ENST00000487447 DHX16O60231 1041 aaKnown RBP13.51□□□□□ -0.25
CLIP2-207ENST00000487447 CYBAP13498 195 aa13.51□□□□□ -0.25
CLIP2-207ENST00000487447 CCL5P13501 91 aa13.51□□□□□ -0.25
CLIP2-207ENST00000487447 CAPN2P17655 700 aa13.51□□□□□ -0.25
CLIP2-207ENST00000487447 METAP2P50579 478 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLIP2-207ENST00000487447 FGD1P98174 961 aa13.51□□□□□ -0.25
CLIP2-207ENST00000487447 CACNB2Q08289 660 aaPredicted RBP13.51□□□□□ -0.25
CLIP2-207ENST00000487447 MTFR1Q15390 333 aa13.51□□□□□ -0.25
CLIP2-207ENST00000487447 NTRK3Q16288 839 aa13.51□□□□□ -0.25
CLIP2-207ENST00000487447 RAB11FIP4Q86YS3 637 aa13.51□□□□□ -0.25
CLIP2-207ENST00000487447 MORC4Q8TE76 937 aa13.51□□□□□ -0.25
CLIP2-207ENST00000487447 TINF2Q9BSI4 451 aa13.51□□□□□ -0.25
CLIP2-207ENST00000487447 C22orf23Q9BZE7 217 aa13.51□□□□□ -0.25
CLIP2-207ENST00000487447 MAP3K20Q9NYL2 800 aaKnown RBP13.51□□□□□ -0.25
CLIP2-207ENST00000487447 MRPL11Q9Y3B7 192 aaKnown RBP13.51□□□□□ -0.25
CLIP2-207ENST00000487447 CCDC196A0A1B0GTZ2 297 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 POTEB2H3BUK9 544 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 GJB1P08034 283 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 PRKAR2AP13861 404 aaKnown RBP13.5□□□□□ -0.25
CLIP2-207ENST00000487447 SLC4A3P48751 1232 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 HSD17B4P51659 736 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 BAATQ14032 418 aaPredicted RBP13.5□□□□□ -0.25
CLIP2-207ENST00000487447 ANKRD1Q15327 319 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms