RNA–Protein interactions for RNA: ENST00000487168.1

KRIT1-223, Transcript of KRIT1, ankyrin repeat containing, human

TSL 2

Gene KRIT1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRIT1-223	ENST00000487168	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	UBAC1	Q9BSL1	405 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	TOMM22	Q9NS69	142 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	OGDHL	Q9ULD0	1010 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	TACC3	Q9Y6A5	838 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	RAD21	O60216	631 aa		11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	NMT2	O60551	498 aa		11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	KDM4A	O75164	1064 aa		11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	EN2	P19622	333 aa	Predicted RBP	11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	MCC	P23508	829 aa		11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	ZNF543	Q08ER8	600 aa		11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	RRP12	Q5JTH9	1297 aa	Known RBP	11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	WDR78	Q5VTH9	848 aa		11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	PRPF38B	Q5VTL8	546 aa	Known RBP	11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	MAMDC4	Q6UXC1	1216 aa		11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	SPNS2	Q8IVW8	549 aa		11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	OXER1	Q8TDS5	423 aa		11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	KIFC2	Q96AC6	838 aa		11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	MAML3	Q96JK9	1138 aa		11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	MMP19	Q99542	508 aa		11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	NUP88	Q99567	741 aa	Predicted RBP	11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	HTATIP2	Q9BUP3	242 aa		11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	RANBP17	Q9H2T7	1088 aa	Known RBP	11.62	□□□□□ -0.55
KRIT1-223	ENST00000487168	ICAM1	P05362	532 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	CYP21A2	P08686	494 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	CYBA	P13498	195 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	CACNB2	Q08289	660 aa	Predicted RBP	11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	TRAF1	Q13077	416 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	MMRN1	Q13201	1228 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	ZNF792	Q3KQV3	632 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	RALYL	Q86SE5	291 aa	Known RBP	11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	ENAH	Q8N8S7	591 aa	Predicted RBP	11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	PNMA1	Q8ND90	353 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	DEFB118	Q96PH6	123 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	MAP3K14	Q99558	947 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	ESYT1	Q9BSJ8	1104 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	IL25	Q9H293	177 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	ACAD9	Q9H845	621 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	KAT14	Q9H8E8	782 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	ZSWIM5	Q9P217	1185 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	PRR12	Q9ULL5	1215 aa		11.61	□□□□□ -0.55
KRIT1-223	ENST00000487168	TNKS	O95271	1327 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	FAM205C	A6NFA0	338 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	SEPT4	O43236	478 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	PEX10	O60683	326 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	COBL	O75128	1261 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	CDC45	O75419	566 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	FARP2	O94887	1054 aa	Predicted RBP	11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	IK	Q13123	557 aa	Predicted RBP	11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	SYDE2	Q5VT97	1194 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	RNF20	Q5VTR2	975 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	PARP9	Q8IXQ6	854 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	TMTC2	Q8N394	836 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	RGS22	Q8NE09	1264 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	NCOA7	Q8NI08	942 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	TINF2	Q9BSI4	451 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	INCENP	Q9NQS7	918 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	ZNF536	O15090	1300 aa		11.6	□□□□□ -0.55
KRIT1-223	ENST00000487168	PLXNA1	Q9UIW2	1896 aa		11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	ERICH2	A1L162	156 aa		11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168		B4E1Z4	1266 aa		11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	TFRC	P02786	760 aa	Known RBP	11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	PTH1R	Q03431	593 aa		11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	SEC23A	Q15436	765 aa		11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	CCDC96	Q2M329	555 aa		11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	TSGA10IP	Q3SY00	556 aa		11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	IFIT1B	Q5T764	474 aa	Known RBP	11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	NECAB2	Q7Z6G3	386 aa		11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	TEX2	Q8IWB9	1127 aa		11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	SAMD3	Q8N6K7	520 aa		11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	NPLOC4	Q8TAT6	608 aa		11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	DDX11	Q96FC9	970 aa		11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	LSG1	Q9H089	658 aa	Known RBP	11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168	DDX20	Q9UHI6	824 aa	Known RBP	11.59	□□□□□ -0.55
KRIT1-223	ENST00000487168		E7EWF7	191 aa		11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	EIF5B	O60841	1220 aa	Known RBP	11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	KRT32	Q14532	448 aa		11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	CCL14	Q16627	93 aa		11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	KCTD1	Q719H9	257 aa		11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	ANKRD35	Q8N283	1001 aa		11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	FAM133A	Q8N9E0	248 aa		11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	TMEM87B	Q96K49	555 aa		11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	HS3ST6	Q96QI5	342 aa		11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	RNF146	Q9NTX7	359 aa		11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	PPP4R2	Q9NY27	417 aa		11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	FLRT1	Q9NZU1	646 aa		11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	CNPY2	Q9Y2B0	182 aa		11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	RBM8A	Q9Y5S9	174 aa	Known RBP	11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	FRMPD3	Q5JV73	1810 aa		11.58	□□□□□ -0.56
KRIT1-223	ENST00000487168	ASB14	A6NK59	587 aa		11.57	□□□□□ -0.56
KRIT1-223	ENST00000487168	DNM1L	O00429	736 aa		11.57	□□□□□ -0.56
KRIT1-223	ENST00000487168	HMGB1	P09429	215 aa	Known RBP	11.57	□□□□□ -0.56
KRIT1-223	ENST00000487168	PARP1	P09874	1014 aa	Known RBP	11.57	□□□□□ -0.56
KRIT1-223	ENST00000487168	COL6A1	P12109	1028 aa		11.57	□□□□□ -0.56
KRIT1-223	ENST00000487168	SMARCA1	P28370	1054 aa		11.57	□□□□□ -0.56
KRIT1-223	ENST00000487168	MCM5	P33992	734 aa		11.57	□□□□□ -0.56
KRIT1-223	ENST00000487168	LIFR	P42702	1097 aa		11.57	□□□□□ -0.56
KRIT1-223	ENST00000487168	NKX3-2	P78367	333 aa		11.57	□□□□□ -0.56
KRIT1-223	ENST00000487168	NECTIN1	Q15223	517 aa		11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms