RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 HMGB1P1B2RPK0 211 aaPredicted RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 EXOC5O00471 708 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 TSPY3P0CV98 308 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 TSPY8P0CW00 308 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 SCG2P13521 617 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 MCAMP43121 646 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 TRAPPC10P48553 1259 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 ERVK-24P63145 666 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 SCARF1Q14162 830 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 ASIC2Q16515 512 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 DAAM2Q86T65 1068 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 ELOA2Q8IYF1 753 aaPredicted RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 BLIDQ8IZY5 108 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 STRBPQ96SI9 672 aaKnown RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 POLD4Q9HCU8 107 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 INTS13Q9NVM9 706 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 MTRF1LQ9UGC7 380 aaKnown RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 ACTN4O43707 911 aaKnown RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 PRKAB2O43741 272 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 CCNT1O60563 726 aaKnown RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 PDE8BO95263 885 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 IKQ13123 557 aaPredicted RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 PTPROQ16827 1216 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 IFT74Q96LB3 600 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 PIH1D3Q9NQM4 214 aaKnown RBP8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 ANKRD26Q9UPS8 1709 aa8.47□□□□□ -1.05
COL6A4P1-202ENST00000487147 CDHR2Q9BYE9 1310 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 NCAPD2Q15021 1401 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 GNA11P29992 359 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 TXKP42681 527 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 GUCY1A3Q02108 690 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 VWA3BQ502W6 1294 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 NFRKBQ6P4R8 1299 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 CCDC25Q86WR0 208 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 WHAMMQ8TF30 809 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 OSBPL9Q96SU4 736 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 MAP3K14Q99558 947 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 SLC39A2Q9NP94 309 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 KLC4Q9NSK0 619 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 MCM9Q9NXL9 1143 aa8.46□□□□□ -1.05
COL6A4P1-202ENST00000487147 ESYT3A0FGR9 886 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 KIF1CO43896 1103 aaKnown RBP8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 HIBCHQ6NVY1 386 aaPredicted RBP8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 TRAPPC11Q7Z392 1133 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 PEX26Q7Z412 305 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 CCDC63Q8NA47 563 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 TCP11Q8WWU5 503 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 MLXIPQ9HAP2 919 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 TFR2Q9UP52 801 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 G3V3G9 751 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 KRIT1O00522 736 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 HGSO14964 777 aaPredicted RBP8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 PDE8AO60658 829 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 RPS6KA5O75582 802 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 FTCDO95954 541 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 PCCAP05165 728 aaPredicted RBP8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 CCNE1P24864 410 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 PEX19P40855 299 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 INF2Q27J81 1249 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 GLE1Q53GS7 698 aaKnown RBP8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 DCAF8Q5TAQ9 597 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 NLRP14Q86W24 1093 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 TACO1Q9BSH4 297 aaKnown RBP8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 GREM2Q9H772 168 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 SENP2Q9HC62 589 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 KCNK9Q9NPC2 374 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 CAPN11Q9UMQ6 739 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 SNX12Q9UMY4 172 aa8.46□□□□□ -1.06
COL6A4P1-202ENST00000487147 A0A1W2PQC6 194 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 MYO1FO00160 1098 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 PPP1R37O75864 691 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 FOXO4P98177 505 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 ATP11AP98196 1134 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 KRT26Q7Z3Y9 468 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 PIK3R5Q8WYR1 880 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 SUFUQ9UMX1 484 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 IFT172Q9UG01 1749 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 PTPRUQ92729 1446 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 ERBB3P21860 1342 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 DPYDQ12882 1025 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 ARMC9Q7Z3E5 817 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 SUGP1Q8IWZ8 645 aaKnown RBP8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 ZBTB38Q8NAP3 1195 aaPredicted RBP8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 CCDC197Q8NCU1 140 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 IGDCC4Q8TDY8 1250 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 SMCR8Q8TEV9 937 aaPredicted RBP8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 DPH5Q9H2P9 285 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 PLAAQ9Y263 795 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 A0A0U1RQJ8 604 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 PRPF3O43395 683 aaKnown RBP8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 KRT14P02533 472 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 PRPHP41219 470 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 UBE4AQ14139 1066 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 CCDC6Q16204 474 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 FAM47AQ5JRC9 791 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 TMEM139Q8IV31 216 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 CTNNBL1Q8WYA6 563 aaPredicted RBP8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 LSM14BQ9BX40 385 aaKnown RBP8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 FAM205CA6NFA0 338 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms