RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CETN3O15182 167 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 FMR1Q06787 632 aaKnown RBP eCLIP14.73□□□□□ -0.052e-6■□□□□ 10.3
HMGN1-216ENST00000486741 SEPT2Q15019 361 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 NTRK3Q16288 839 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 AOC3Q16853 763 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 KMT5BQ4FZB7 885 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 LEKR1Q6ZMV7 388 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 MYCT1Q8N699 235 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 TUBGCP2Q9BSJ2 902 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 NBPF3Q9H094 633 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 DISC1Q9NRI5 854 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 NALCNQ8IZF0 1738 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 CETN1Q12798 172 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 TRAF1Q13077 416 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 EHBP1Q8NDI1 1231 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 FLAD1Q8NFF5 587 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 GDAP1L1Q96MZ0 367 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 MRPL44Q9H9J2 332 aaKnown RBP14.73□□□□□ -0.05
HMGN1-216ENST00000486741 GH2P01242 217 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 POLD1P28340 1107 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 RASGRP2Q7LDG7 609 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 ACRBPQ8NEB7 543 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 LARP4BQ92615 738 aaKnown RBP14.73□□□□□ -0.05
HMGN1-216ENST00000486741 DAGLAQ9Y4D2 1042 aa14.73□□□□□ -0.05
HMGN1-216ENST00000486741 ALAS1P13196 640 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 RXRBP28702 533 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 GPATCH4Q5T3I0 446 aaKnown RBP14.72□□□□□ -0.05
HMGN1-216ENST00000486741 JAKMIP2Q96AA8 810 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 NAPGQ99747 312 aaPredicted RBP14.72□□□□□ -0.05
HMGN1-216ENST00000486741 HPS3Q969F9 1004 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 MASTLQ96GX5 879 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 CNOT6LQ96LI5 555 aaKnown RBP14.72□□□□□ -0.05
HMGN1-216ENST00000486741 PHF20Q9BVI0 1012 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.72□□□□□ -0.05
HMGN1-216ENST00000486741 CNTNAP4Q9C0A0 1308 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 ADRA2BP18089 450 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 MYOCDQ8IZQ8 938 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 CEP112Q8N8E3 955 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 CCDC17Q96LX7 622 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 KANSL2Q9H9L4 492 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 PANK4Q9NVE7 773 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 PI4KBQ9UBF8 816 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 VGLL3A8MV65 326 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 BACH1O14867 736 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 TUBB4AP04350 444 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 TOB1P50616 345 aaPredicted RBP14.72□□□□□ -0.05
HMGN1-216ENST00000486741 ZNF658Q5TYW1 1059 aaPredicted RBP14.72□□□□□ -0.05
HMGN1-216ENST00000486741 NBPF11Q86T75 865 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 AMNQ9BXJ7 453 aa14.72□□□□□ -0.05
HMGN1-216ENST00000486741 ENC1O14682 589 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 KRT13P13646 458 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 GRM4Q14833 912 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 KRT31Q15323 416 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 FAM26FQ5R3K3 315 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 ARMCX5Q6P1M9 558 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 GJA10Q969M2 543 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 FAM217BQ9NTX9 383 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-216ENST00000486741 FLT1P17948 1338 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 STX10O60499 249 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 TDP2O95551 362 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 MAGEA1P43355 309 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 PTPAQ15257 358 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 MTA3Q9BTC8 594 aa14.71□□□□□ -0.05
HMGN1-216ENST00000486741 GAS7O60861 476 aa14.71□□□□□ -0.06
HMGN1-216ENST00000486741 RASA1P20936 1047 aa14.71□□□□□ -0.06
HMGN1-216ENST00000486741 PRCPP42785 496 aa14.71□□□□□ -0.06
HMGN1-216ENST00000486741 NEDD1Q8NHV4 660 aa14.71□□□□□ -0.06
HMGN1-216ENST00000486741 ATF5Q9Y2D1 282 aaPredicted RBP14.71□□□□□ -0.06
HMGN1-216ENST00000486741 SLIT3O75094 1523 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 ARHGEF35A5YM69 484 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 CCDC169A6NNP5 214 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 LMAN1P49257 510 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 PPARDQ03181 441 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 TRIM14Q14142 442 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 ZNF579Q8NAF0 562 aaKnown RBP14.7□□□□□ -0.06
HMGN1-216ENST00000486741 SCLT1Q96NL6 688 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.7□□□□□ -0.06
HMGN1-216ENST00000486741 XRN1Q8IZH2 1706 aaKnown RBP14.7□□□□□ -0.06
HMGN1-216ENST00000486741 MED1Q15648 1581 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-216ENST00000486741 MAP9Q49MG5 647 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 CC2D2BQ6DHV5 1058 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 SUPT20HQ8NEM7 779 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 BARHL2Q9NY43 387 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 POLLQ9UGP5 575 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 SWAP70Q9UH65 585 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 RIC1Q4ADV7 1423 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 TMEM110-MUSTN1A8MSY1 372 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 GYS1P13807 737 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 DNM2P50570 870 aa14.7□□□□□ -0.06
HMGN1-216ENST00000486741 CDC37Q16543 378 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-216ENST00000486741 EARS2Q5JPH6 523 aaKnown RBP14.7□□□□□ -0.06
HMGN1-216ENST00000486741 PSDA5PKW4 1024 aaPredicted RBP14.69□□□□□ -0.06
HMGN1-216ENST00000486741 GOLGA6L10A6NI86 522 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 EEF2P13639 858 aaKnown RBP14.69□□□□□ -0.06
HMGN1-216ENST00000486741 SMCR8Q8TEV9 937 aaPredicted RBP14.69□□□□□ -0.06
HMGN1-216ENST00000486741 TCHPQ9BT92 498 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 GLT8D2Q9H1C3 349 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 SH2D4AQ9H788 454 aa14.69□□□□□ -0.06
HMGN1-216ENST00000486741 EPN1Q9Y6I3 576 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms