RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CUL4BQ13620 913 aa13.52□□□□□ -0.25
PKP4-213ENST00000486254 PDIA5Q14554 519 aa13.52□□□□□ -0.25
PKP4-213ENST00000486254 ARHGEF10LQ9HCE6 1279 aa13.52□□□□□ -0.25
PKP4-213ENST00000486254 VAT1LQ9HCJ6 419 aa13.52□□□□□ -0.25
PKP4-213ENST00000486254 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
PKP4-213ENST00000486254 CD2APQ9Y5K6 639 aa13.52□□□□□ -0.25
PKP4-213ENST00000486254 MYH7BA7E2Y1 1941 aa13.52□□□□□ -0.25
PKP4-213ENST00000486254 CCNT1O60563 726 aaKnown RBP13.51□□□□□ -0.25
PKP4-213ENST00000486254 NDUFB10O96000 172 aa13.51□□□□□ -0.25
PKP4-213ENST00000486254 PPP1R2P41236 205 aa13.51□□□□□ -0.25
PKP4-213ENST00000486254 ZNF280AP59817 542 aaPredicted RBP13.51□□□□□ -0.25
PKP4-213ENST00000486254 NOLC1Q14978 699 aaKnown RBP eCLIP13.51□□□□□ -0.25
PKP4-213ENST00000486254 TNIP1Q15025 636 aa13.51□□□□□ -0.25
PKP4-213ENST00000486254 QRICH1Q2TAL8 776 aa13.51□□□□□ -0.25
PKP4-213ENST00000486254 LETM2Q2VYF4 491 aa13.51□□□□□ -0.25
PKP4-213ENST00000486254 NAALADL2Q58DX5 795 aa13.51□□□□□ -0.25
PKP4-213ENST00000486254 LRRC8AQ8IWT6 810 aa13.51□□□□□ -0.25
PKP4-213ENST00000486254 MBOAT7Q96N66 472 aa13.51□□□□□ -0.25
PKP4-213ENST00000486254 XPO4Q9C0E2 1151 aaKnown RBP13.51□□□□□ -0.25
PKP4-213ENST00000486254 SH2D4AQ9H788 454 aa13.51□□□□□ -0.25
PKP4-213ENST00000486254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.51□□□□□ -0.25
PKP4-213ENST00000486254 IFNKQ9P0W0 207 aa13.51□□□□□ -0.25
PKP4-213ENST00000486254 STK17AQ9UEE5 414 aa13.51□□□□□ -0.25
PKP4-213ENST00000486254 CYP3A7-CYP3A51PA0A087WV96 503 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 USP17L10C9JJH3 530 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 RAD17O75943 681 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 FOSP01100 380 aaPredicted RBP13.5□□□□□ -0.25
PKP4-213ENST00000486254 GH2P01242 217 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 CYP3A7P24462 503 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 LMOD1P29536 600 aaPredicted RBP13.5□□□□□ -0.25
PKP4-213ENST00000486254 USP11P51784 963 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 CDC37Q16543 378 aaPredicted RBP13.5□□□□□ -0.25
PKP4-213ENST00000486254 TMEM266Q2M3C6 531 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 CCDC144BQ3MJ40 725 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 COBLL1Q53SF7 1204 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 ZNF658Q5TYW1 1059 aaPredicted RBP13.5□□□□□ -0.25
PKP4-213ENST00000486254 SPATA1Q5VX52 437 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 RRAGBQ5VZM2 374 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 CIAPIN1Q6FI81 312 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 TTBK2Q6IQ55 1244 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 CNNM4Q6P4Q7 775 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 KCTD1Q719H9 257 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 GRAMD1CQ8IYS0 662 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 COA7Q96BR5 231 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 MTRQ99707 1265 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 AMNQ9BXJ7 453 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 PSTPIP2Q9H939 334 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 BIN2Q9UBW5 565 aaPredicted RBP13.5□□□□□ -0.25
PKP4-213ENST00000486254 PGAP2Q9UHJ9 254 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 TMX2Q9Y320 296 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 NFE2L3Q9Y4A8 694 aa13.5□□□□□ -0.25
PKP4-213ENST00000486254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.49□□□□□ -0.25
PKP4-213ENST00000486254 FAM196BA6NMK8 535 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 NRDCO43847 1150 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 BMP3P12645 472 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 AFMP43652 599 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 ATP2B2Q01814 1243 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 CXCL9Q07325 125 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 SYDE2Q5VT97 1194 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 JAKMIP3Q5VZ66 844 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 CRYGNQ8WXF5 182 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 JDP2Q8WYK2 163 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 GOPCQ9HD26 462 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 FANCLQ9NW38 375 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 ZBTB21Q9ULJ3 1066 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 SYNRGQ9UMZ2 1314 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 PPP1R3GB7ZBB8 358 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 PIK3CDO00329 1044 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 EDIL3O43854 480 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 RHOBTB3O94955 611 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 TNNI2P48788 182 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 UBASH3AP57075 661 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 AMPD3Q01432 767 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 FMR1Q06787 632 aaKnown RBP eCLIP13.49□□□□□ -0.25
PKP4-213ENST00000486254 TNFAIP1Q13829 316 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 KARSQ15046 597 aaKnown RBP13.49□□□□□ -0.25
PKP4-213ENST00000486254 CALCRLQ16602 461 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 CDKAL1Q5VV42 579 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 CABP7Q86V35 215 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 VSTM4Q8IW00 320 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 CCDC112Q8NEF3 446 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 CACTINQ8WUQ7 758 aaKnown RBP13.49□□□□□ -0.25
PKP4-213ENST00000486254 CTAGE1Q96RT6 745 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 SGIP1Q9BQI5 828 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 NRBP1Q9UHY1 535 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 RWDD2AQ9UIY3 292 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 PCDHA1Q9Y5I3 950 aa13.49□□□□□ -0.25
PKP4-213ENST00000486254 TBX3O15119 743 aa13.48□□□□□ -0.25
PKP4-213ENST00000486254 GDF11O95390 407 aa13.48□□□□□ -0.25
PKP4-213ENST00000486254 SERPINC1P01008 464 aa13.48□□□□□ -0.25
PKP4-213ENST00000486254 RPN1P04843 607 aaKnown RBP13.48□□□□□ -0.25
PKP4-213ENST00000486254 ATP1A3P13637 1013 aa13.48□□□□□ -0.25
PKP4-213ENST00000486254 SPAG1Q07617 926 aa13.48□□□□□ -0.25
PKP4-213ENST00000486254 ISM2Q6H9L7 571 aa13.48□□□□□ -0.25
PKP4-213ENST00000486254 KCTD17Q8N5Z5 321 aa13.48□□□□□ -0.25
PKP4-213ENST00000486254 DPF2Q92785 391 aa13.48□□□□□ -0.25
PKP4-213ENST00000486254 CALML4Q96GE6 196 aa13.48□□□□□ -0.25
PKP4-213ENST00000486254 ZNF830Q96NB3 372 aaPredicted RBP13.48□□□□□ -0.25
PKP4-213ENST00000486254 MED15Q96RN5 788 aa13.48□□□□□ -0.25
PKP4-213ENST00000486254 C7orf25Q9BPX7 421 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms