RNA–Protein interactions for RNA: ENST00000486078.1

GTF2B-206, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-206ENST00000486078 UBXN2AP68543 259 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 LACTBP83111 547 aaPredicted RBP6.41□□□□□ -1.38
GTF2B-206ENST00000486078 SQSTM1Q13501 440 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 DCTN1Q14203 1278 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 TAF7Q15545 349 aaPredicted RBP6.41□□□□□ -1.38
GTF2B-206ENST00000486078 CCDC85BQ15834 202 aaPredicted RBP6.41□□□□□ -1.38
GTF2B-206ENST00000486078 DDR2Q16832 855 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 C2orf27AQ580R0 203 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 BRDTQ58F21 947 aaPredicted RBP6.41□□□□□ -1.38
GTF2B-206ENST00000486078 PCNX4Q63HM2 1172 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 NLRP10Q86W26 655 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 C7orf61Q8IZ16 206 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 RAET1EQ8TD07 263 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 SNX29Q8TEQ0 813 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 THAP3Q8WTV1 239 aaPredicted RBP6.41□□□□□ -1.38
GTF2B-206ENST00000486078 U2AF1L4Q8WU68 220 aaKnown RBP6.41□□□□□ -1.38
GTF2B-206ENST00000486078 TSR2Q969E8 191 aaKnown RBP6.41□□□□□ -1.38
GTF2B-206ENST00000486078 OPTNQ96CV9 577 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 ITPKCQ96DU7 683 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 TRIM47Q96LD4 638 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 APBA2Q99767 749 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 MXD3Q9BW11 206 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 UBE2OQ9C0C9 1292 aaKnown RBP6.41□□□□□ -1.38
GTF2B-206ENST00000486078 DEFB129Q9H1M3 183 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 PGPEP1Q9NXJ5 209 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 PPP4R2Q9NY27 417 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 GGA1Q9UJY5 639 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 PLAAQ9Y263 795 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 LEMD3Q9Y2U8 911 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 SH3TC1Q8TE82 1336 aa6.41□□□□□ -1.38
GTF2B-206ENST00000486078 CCL15-CCL14A0A0B4J2E2 113 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 ALG1L2C9J202 215 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 GADD45BO75293 160 aaPredicted RBP6.4□□□□□ -1.38
GTF2B-206ENST00000486078 WDHD1O75717 1129 aaPredicted RBP6.4□□□□□ -1.38
GTF2B-206ENST00000486078 SYN1P17600 705 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 MAGEA10P43363 369 aaPredicted RBP6.4□□□□□ -1.38
GTF2B-206ENST00000486078 IREB2P48200 963 aaKnown RBP6.4□□□□□ -1.38
GTF2B-206ENST00000486078 EPHB1P54762 984 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 RPS8P62241 208 aaKnown RBP6.4□□□□□ -1.38
GTF2B-206ENST00000486078 TEAD4Q15561 434 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 CCL15Q16663 113 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 TKFCQ3LXA3 575 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 FAM109BQ6ICB4 259 aaPredicted RBP6.4□□□□□ -1.38
GTF2B-206ENST00000486078 TRIM46Q7Z4K8 759 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 MAFAQ8NHW3 353 aaPredicted RBP6.4□□□□□ -1.38
GTF2B-206ENST00000486078 BRI3BPQ8WY22 251 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 THUMPD2Q9BTF0 503 aaKnown RBP6.4□□□□□ -1.38
GTF2B-206ENST00000486078 ELP3Q9H9T3 547 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 SRRDQ9UH36 339 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 HCN4Q9Y3Q4 1203 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 KNSTRNQ9Y448 316 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 SUPT16HQ9Y5B9 1047 aaKnown RBP6.4□□□□□ -1.38
GTF2B-206ENST00000486078 PSME4Q14997 1843 aa6.4□□□□□ -1.38
GTF2B-206ENST00000486078 TLR2O60603 784 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 USP2O75604 605 aaPredicted RBP6.39□□□□□ -1.39
GTF2B-206ENST00000486078 ALDH1L1O75891 902 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 HOXD10P28358 340 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 PSMC4P43686 418 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 CDKN1CP49918 316 aaPredicted RBP6.39□□□□□ -1.39
GTF2B-206ENST00000486078 GTF2A2P52657 109 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 APOBRQ0VD83 1088 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 MAP3K12Q12852 859 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 SF3B3Q15393 1217 aaKnown RBP6.39□□□□□ -1.39
GTF2B-206ENST00000486078 FOXD4L6Q3SYB3 417 aaPredicted RBP6.39□□□□□ -1.39
GTF2B-206ENST00000486078 SUPT20HL1Q3ZLR7 823 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 MTERF2Q49AM1 385 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 HSP90AB3PQ58FF7 597 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 DACT2Q5SW24 774 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 MRPL14Q6P1L8 145 aaKnown RBP6.39□□□□□ -1.39
GTF2B-206ENST00000486078 FOXD4L3Q6VB84 417 aaPredicted RBP6.39□□□□□ -1.39
GTF2B-206ENST00000486078 PODNQ7Z5L7 613 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 C11orf96Q7Z7L8 435 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 JAMLQ86YT9 394 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 FAM43AQ8N2R8 423 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 CELF2-AS1Q8N7Q2 184 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 CHAC2Q8WUX2 184 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 SHDQ96IW2 340 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 PAWRQ96IZ0 340 aaKnown RBP6.39□□□□□ -1.39
GTF2B-206ENST00000486078 RBSNQ9H1K0 784 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 ZFAND3Q9H8U3 227 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 NPHS2Q9NP85 383 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 ST7Q9NRC1 585 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 FOXD3Q9UJU5 478 aaPredicted RBP6.39□□□□□ -1.39
GTF2B-206ENST00000486078 PNMA2Q9UL42 364 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 MAPK8IP1Q9UQF2 711 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 LAS1LQ9Y4W2 734 aaKnown RBP6.39□□□□□ -1.39
GTF2B-206ENST00000486078 LAMA3Q16787 3333 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 COL1A1P02452 1464 aaPredicted RBP6.39□□□□□ -1.39
GTF2B-206ENST00000486078 SSC5DA1L4H1 1573 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 COL4A1P02462 1669 aa6.39□□□□□ -1.39
GTF2B-206ENST00000486078 F6X3S4 739 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 TSPAN6O43657 245 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 PHACTR2O75167 634 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 CTGFP29279 349 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 PMLP29590 882 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 PRKAR2BP31323 418 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 HLTFQ14527 1009 aaKnown RBP eCLIP6.38□□□□□ -1.39
GTF2B-206ENST00000486078 BRD3Q15059 726 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 PPP2R5AQ15172 486 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 TLR1Q15399 786 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms