RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ANKS1AQ92625 1134 aa20.65■□□□□ 0.9
COL6A1-204ENST00000486023 ABHD16BQ9H3Z7 469 aa20.65■□□□□ 0.9
COL6A1-204ENST00000486023 CYP39A1Q9NYL5 469 aa20.65■□□□□ 0.9
COL6A1-204ENST00000486023 ATP11BQ9Y2G3 1177 aa20.65■□□□□ 0.9
COL6A1-204ENST00000486023 ERICH2A1L162 156 aa20.64■□□□□ 0.89
COL6A1-204ENST00000486023 CCDC144BQ3MJ40 725 aa20.64■□□□□ 0.89
COL6A1-204ENST00000486023 NCOA7Q8NI08 942 aa20.64■□□□□ 0.89
COL6A1-204ENST00000486023 MAP4K1Q92918 833 aa20.64■□□□□ 0.89
COL6A1-204ENST00000486023 ANO2Q9NQ90 1003 aa20.64■□□□□ 0.89
COL6A1-204ENST00000486023 ASB14A6NK59 587 aa20.63■□□□□ 0.89
COL6A1-204ENST00000486023 ADGRF4Q8IZF3 695 aa20.63■□□□□ 0.89
COL6A1-204ENST00000486023 ESYT1Q9BSJ8 1104 aa20.63■□□□□ 0.89
COL6A1-204ENST00000486023 NEFLP07196 543 aa20.62■□□□□ 0.89
COL6A1-204ENST00000486023 RTP1P59025 263 aa20.62■□□□□ 0.89
COL6A1-204ENST00000486023 CDC37Q16543 378 aaPredicted RBP20.62■□□□□ 0.89
COL6A1-204ENST00000486023 ASPRV1Q53RT3 343 aa20.62■□□□□ 0.89
COL6A1-204ENST00000486023 SLC39A5Q6ZMH5 540 aa20.62■□□□□ 0.89
COL6A1-204ENST00000486023 RNF207Q6ZRF8 634 aa20.62■□□□□ 0.89
COL6A1-204ENST00000486023 STOX1Q6ZVD7 989 aa20.62■□□□□ 0.89
COL6A1-204ENST00000486023 STAG2Q8N3U4 1231 aa20.62■□□□□ 0.89
COL6A1-204ENST00000486023 IRX5P78411 483 aaPredicted RBP20.61■□□□□ 0.89
COL6A1-204ENST00000486023 WTAPQ15007 396 aa20.61■□□□□ 0.89
COL6A1-204ENST00000486023 SART3Q15020 963 aaKnown RBP20.61■□□□□ 0.89
COL6A1-204ENST00000486023 SEC23AQ15436 765 aa20.61■□□□□ 0.89
COL6A1-204ENST00000486023 SLC30A10Q6XR72 485 aa20.61■□□□□ 0.89
COL6A1-204ENST00000486023 VTI1AQ96AJ9 217 aa20.61■□□□□ 0.89
COL6A1-204ENST00000486023 SENP2Q9HC62 589 aa20.61■□□□□ 0.89
COL6A1-204ENST00000486023 ASTN1O14525 1302 aa20.6■□□□□ 0.89
COL6A1-204ENST00000486023 SYNRGQ9UMZ2 1314 aa20.6■□□□□ 0.89
COL6A1-204ENST00000486023 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.6■□□□□ 0.89
COL6A1-204ENST00000486023 C6orf222P0C671 652 aaPredicted RBP20.6■□□□□ 0.89
COL6A1-204ENST00000486023 MDM2Q00987 491 aaPredicted RBP20.6■□□□□ 0.89
COL6A1-204ENST00000486023 TMEM67Q5HYA8 995 aa20.6■□□□□ 0.89
COL6A1-204ENST00000486023 FBXO16Q8IX29 292 aaPredicted RBP20.6■□□□□ 0.89
COL6A1-204ENST00000486023 CLEC4DQ8WXI8 215 aa20.6■□□□□ 0.89
COL6A1-204ENST00000486023 LSG1Q9H089 658 aaKnown RBP20.6■□□□□ 0.89
COL6A1-204ENST00000486023 SPC25Q9HBM1 224 aa20.6■□□□□ 0.89
COL6A1-204ENST00000486023 PRDM5Q9NQX1 630 aaPredicted RBP20.6■□□□□ 0.89
COL6A1-204ENST00000486023 PDGFCQ9NRA1 345 aa20.6■□□□□ 0.89
COL6A1-204ENST00000486023 PRKAG2Q9UGJ0 569 aa20.6■□□□□ 0.89
COL6A1-204ENST00000486023 PNMA2Q9UL42 364 aa20.6■□□□□ 0.89
COL6A1-204ENST00000486023 PLXNA1Q9UIW2 1896 aa20.59■□□□□ 0.89
COL6A1-204ENST00000486023 MYADML2A6NDP7 307 aa20.59■□□□□ 0.89
COL6A1-204ENST00000486023 KLRF2D3W0D1 207 aa20.59■□□□□ 0.89
COL6A1-204ENST00000486023 ADCY6O43306 1168 aa20.59■□□□□ 0.89
COL6A1-204ENST00000486023 DUSP11O75319 330 aaKnown RBP20.59■□□□□ 0.89
COL6A1-204ENST00000486023 MAGEA10P43363 369 aaPredicted RBP20.59■□□□□ 0.89
COL6A1-204ENST00000486023 TNFAIP2Q03169 654 aa20.59■□□□□ 0.89
COL6A1-204ENST00000486023 KCNA10Q16322 511 aa20.59■□□□□ 0.89
COL6A1-204ENST00000486023 QRICH1Q2TAL8 776 aa20.59■□□□□ 0.89
COL6A1-204ENST00000486023 TRIM60Q495X7 471 aa20.59■□□□□ 0.89
COL6A1-204ENST00000486023 BMP2KLQ5H9B9 411 aa20.59■□□□□ 0.89
COL6A1-204ENST00000486023 JMJD4Q9H9V9 463 aa20.59■□□□□ 0.89
COL6A1-204ENST00000486023 ADD3Q9UEY8 706 aaKnown RBP20.59■□□□□ 0.89
COL6A1-204ENST00000486023 ADAMTS4O75173 837 aa20.58■□□□□ 0.89
COL6A1-204ENST00000486023 PTGS1P23219 599 aa20.58■□□□□ 0.89
COL6A1-204ENST00000486023 RPS6P62753 249 aaKnown RBP20.58■□□□□ 0.89
COL6A1-204ENST00000486023 CASC1Q6TDU7 716 aa20.58■□□□□ 0.89
COL6A1-204ENST00000486023 FBXO11Q86XK2 927 aa20.58■□□□□ 0.89
COL6A1-204ENST00000486023 HOMER1Q86YM7 354 aa20.58■□□□□ 0.89
COL6A1-204ENST00000486023 NUP133Q8WUM0 1156 aa20.58■□□□□ 0.89
COL6A1-204ENST00000486023 TBC1D5Q92609 795 aa20.58■□□□□ 0.89
COL6A1-204ENST00000486023 PHF24Q9UPV7 400 aa20.58■□□□□ 0.89
COL6A1-204ENST00000486023 LAMA4Q16363 1823 aa20.57■□□□□ 0.88
COL6A1-204ENST00000486023 DNAH12Q6ZR08 3092 aa20.57■□□□□ 0.88
COL6A1-204ENST00000486023 WDR19Q8NEZ3 1342 aa20.57■□□□□ 0.88
COL6A1-204ENST00000486023 A0A1W2PQ45 241 aaPredicted RBP20.57■□□□□ 0.88
COL6A1-204ENST00000486023 A0A1W2PQY0 241 aa20.57■□□□□ 0.88
COL6A1-204ENST00000486023 SLC27A2O14975 620 aa20.57■□□□□ 0.88
COL6A1-204ENST00000486023 ALDH5A1P51649 535 aaPredicted RBP20.57■□□□□ 0.88
COL6A1-204ENST00000486023 ACLYP53396 1101 aa20.57■□□□□ 0.88
COL6A1-204ENST00000486023 BEX3Q00994 111 aa20.57■□□□□ 0.88
COL6A1-204ENST00000486023 GNASQ5JWF2 1037 aa20.57■□□□□ 0.88
COL6A1-204ENST00000486023 CATIPQ7Z7H3 387 aa20.57■□□□□ 0.88
COL6A1-204ENST00000486023 PIBF1Q8WXW3 757 aa20.57■□□□□ 0.88
COL6A1-204ENST00000486023 LBHD1Q9BQE6 289 aaPredicted RBP20.57■□□□□ 0.88
COL6A1-204ENST00000486023 KATNBL1Q9H079 304 aa20.57■□□□□ 0.88
COL6A1-204ENST00000486023 GPHNQ9NQX3 736 aaPredicted RBP20.57■□□□□ 0.88
COL6A1-204ENST00000486023 MAD2L2Q9UI95 211 aa20.57■□□□□ 0.88
COL6A1-204ENST00000486023 DYNC1LI2O43237 492 aaPredicted RBP20.56■□□□□ 0.88
COL6A1-204ENST00000486023 ANTXR2P58335 489 aa20.56■□□□□ 0.88
COL6A1-204ENST00000486023 TMEM63BQ5T3F8 832 aa20.56■□□□□ 0.88
COL6A1-204ENST00000486023 CREB3L3Q68CJ9 461 aa20.56■□□□□ 0.88
COL6A1-204ENST00000486023 NFXL1Q6ZNB6 911 aa20.56■□□□□ 0.88
COL6A1-204ENST00000486023 MB21D2Q8IYB1 491 aaPredicted RBP20.56■□□□□ 0.88
COL6A1-204ENST00000486023 UBE2OQ9C0C9 1292 aaKnown RBP20.56■□□□□ 0.88
COL6A1-204ENST00000486023 AP5M1Q9H0R1 490 aa20.56■□□□□ 0.88
COL6A1-204ENST00000486023 STARD7Q9NQZ5 370 aa20.56■□□□□ 0.88
COL6A1-204ENST00000486023 SMCHD1A6NHR9 2005 aa20.56■□□□□ 0.88
COL6A1-204ENST00000486023 ABCB11O95342 1321 aa20.55■□□□□ 0.88
COL6A1-204ENST00000486023 PRC1O43663 620 aa20.55■□□□□ 0.88
COL6A1-204ENST00000486023 PQBP1O60828 265 aaKnown RBP20.55■□□□□ 0.88
COL6A1-204ENST00000486023 SMPD1P17405 629 aa20.55■□□□□ 0.88
COL6A1-204ENST00000486023 FXR1P51114 621 aaKnown RBP eCLIP20.55■□□□□ 0.88
COL6A1-204ENST00000486023 TLE2Q04725 743 aa20.55■□□□□ 0.88
COL6A1-204ENST00000486023 PDE4DQ08499 809 aa20.55■□□□□ 0.88
COL6A1-204ENST00000486023 KLHDC9Q8NEP7 349 aa20.55■□□□□ 0.88
COL6A1-204ENST00000486023 GDF15Q99988 308 aa20.55■□□□□ 0.88
COL6A1-204ENST00000486023 MYL10Q9BUA6 226 aa20.55■□□□□ 0.88
COL6A1-204ENST00000486023 MRPL11Q9Y3B7 192 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms