RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 KCTD2Q14681 263 aa27.39■■□□□ 1.98
ABCF3-216ENST00000485921 RAET1EQ8TD07 263 aa27.39■■□□□ 1.98
ABCF3-216ENST00000485921 USP6NLQ92738 828 aa27.39■■□□□ 1.98
ABCF3-216ENST00000485921 SEC63Q9UGP8 760 aaKnown RBP27.39■■□□□ 1.98
ABCF3-216ENST00000485921 CNTNAP5Q8WYK1 1306 aa27.39■■□□□ 1.97
ABCF3-216ENST00000485921 ADORA2AP29274 412 aa27.38■■□□□ 1.97
ABCF3-216ENST00000485921 MAP2K5Q13163 448 aa27.38■■□□□ 1.97
ABCF3-216ENST00000485921 FBXO46Q6PJ61 603 aaPredicted RBP27.38■■□□□ 1.97
ABCF3-216ENST00000485921 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.38■■□□□ 1.97
ABCF3-216ENST00000485921 SLKQ9H2G2 1235 aaPredicted RBP27.38■■□□□ 1.97
ABCF3-216ENST00000485921 PTCH2Q9Y6C5 1203 aa27.38■■□□□ 1.97
ABCF3-216ENST00000485921 ABCB11O95342 1321 aa27.38■■□□□ 1.97
ABCF3-216ENST00000485921 hCG_1642624A0A1W2PR95 340 aa27.37■■□□□ 1.97
ABCF3-216ENST00000485921 PFKFB2O60825 505 aa27.37■■□□□ 1.97
ABCF3-216ENST00000485921 CYP2B6P20813 491 aa27.37■■□□□ 1.97
ABCF3-216ENST00000485921 RGS2P41220 211 aa27.37■■□□□ 1.97
ABCF3-216ENST00000485921 ANKRD35Q8N283 1001 aa27.37■■□□□ 1.97
ABCF3-216ENST00000485921 SMCHD1A6NHR9 2005 aa27.36■■□□□ 1.97
ABCF3-216ENST00000485921 TRAF1Q13077 416 aa27.36■■□□□ 1.97
ABCF3-216ENST00000485921 IRF5Q13568 498 aa27.36■■□□□ 1.97
ABCF3-216ENST00000485921 DPP9Q86TI2 863 aa27.36■■□□□ 1.97
ABCF3-216ENST00000485921 IL27Q8NEV9 243 aa27.36■■□□□ 1.97
ABCF3-216ENST00000485921 CLEC4DQ8WXI8 215 aa27.36■■□□□ 1.97
ABCF3-216ENST00000485921 DDX11Q96FC9 970 aa27.36■■□□□ 1.97
ABCF3-216ENST00000485921 MCOLN1Q9GZU1 580 aa27.36■■□□□ 1.97
ABCF3-216ENST00000485921 MRPL11Q9Y3B7 192 aaKnown RBP27.36■■□□□ 1.97
ABCF3-216ENST00000485921 PCDHA1Q9Y5I3 950 aa27.36■■□□□ 1.97
ABCF3-216ENST00000485921 V9GY48 417 aaPredicted RBP27.36■■□□□ 1.97
ABCF3-216ENST00000485921 PLXNB2O15031 1838 aa27.36■■□□□ 1.97
ABCF3-216ENST00000485921 NFIBO00712 420 aa27.35■■□□□ 1.97
ABCF3-216ENST00000485921 ST18O60284 1047 aa27.35■■□□□ 1.97
ABCF3-216ENST00000485921 COBLO75128 1261 aa27.35■■□□□ 1.97
ABCF3-216ENST00000485921 SCRN1Q12765 414 aa27.35■■□□□ 1.97
ABCF3-216ENST00000485921 NTRK3Q16288 839 aa27.35■■□□□ 1.97
ABCF3-216ENST00000485921 ME3Q16798 604 aa27.35■■□□□ 1.97
ABCF3-216ENST00000485921 A1CFQ9NQ94 594 aaKnown RBP27.35■■□□□ 1.97
ABCF3-216ENST00000485921 LIMCH1Q9UPQ0 1083 aa27.35■■□□□ 1.97
ABCF3-216ENST00000485921 MYH6P13533 1939 aa27.34■■□□□ 1.97
ABCF3-216ENST00000485921 CPLX1O14810 134 aa27.34■■□□□ 1.97
ABCF3-216ENST00000485921 LARGE1O95461 756 aa27.34■■□□□ 1.97
ABCF3-216ENST00000485921 PGK2P07205 417 aa27.34■■□□□ 1.97
ABCF3-216ENST00000485921 XRCC5P13010 732 aaKnown RBP27.34■■□□□ 1.97
ABCF3-216ENST00000485921 NSMFQ6X4W1 530 aa27.34■■□□□ 1.97
ABCF3-216ENST00000485921 APBA2Q99767 749 aa27.34■■□□□ 1.97
ABCF3-216ENST00000485921 ADCY3O60266 1144 aa27.33■■□□□ 1.97
ABCF3-216ENST00000485921 HOXC6P09630 235 aa27.33■■□□□ 1.97
ABCF3-216ENST00000485921 IFNAR1P17181 557 aa27.33■■□□□ 1.97
ABCF3-216ENST00000485921 SLC5A4Q9NY91 659 aa27.33■■□□□ 1.97
ABCF3-216ENST00000485921 CPLX2Q6PUV4 134 aaKnown RBP27.32■■□□□ 1.96
ABCF3-216ENST00000485921 NECAB1Q8N987 351 aa27.32■■□□□ 1.96
ABCF3-216ENST00000485921 NPLOC4Q8TAT6 608 aa27.32■■□□□ 1.96
ABCF3-216ENST00000485921 PHKBQ93100 1093 aa27.32■■□□□ 1.96
ABCF3-216ENST00000485921 CYP39A1Q9NYL5 469 aa27.32■■□□□ 1.96
ABCF3-216ENST00000485921 PFASO15067 1338 aa27.32■■□□□ 1.96
ABCF3-216ENST00000485921 ZNF236Q9UL36 1845 aa27.32■■□□□ 1.96
ABCF3-216ENST00000485921 DNAJC25-GNG10A0A024R161 153 aa27.31■■□□□ 1.96
ABCF3-216ENST00000485921 PRPF3O43395 683 aaKnown RBP27.31■■□□□ 1.96
ABCF3-216ENST00000485921 PPFIA3O75145 1194 aa27.31■■□□□ 1.96
ABCF3-216ENST00000485921 BAATQ14032 418 aaPredicted RBP27.31■■□□□ 1.96
ABCF3-216ENST00000485921 SLC26A6Q9BXS9 759 aa27.31■■□□□ 1.96
ABCF3-216ENST00000485921 ZNFX1Q9P2E3 1918 aaKnown RBP27.3■■□□□ 1.96
ABCF3-216ENST00000485921 PTPDC1A2A3K4 754 aa27.3■■□□□ 1.96
ABCF3-216ENST00000485921 ELNP15502 786 aa27.3■■□□□ 1.96
ABCF3-216ENST00000485921 GRK4P32298 578 aa27.3■■□□□ 1.96
ABCF3-216ENST00000485921 AKAP17AQ02040 695 aaKnown RBP27.3■■□□□ 1.96
ABCF3-216ENST00000485921 ZNF792Q3KQV3 632 aa27.3■■□□□ 1.96
ABCF3-216ENST00000485921 RNF207Q6ZRF8 634 aa27.3■■□□□ 1.96
ABCF3-216ENST00000485921 HEATR3Q7Z4Q2 680 aa27.3■■□□□ 1.96
ABCF3-216ENST00000485921 MCF2L2Q86YR7 1114 aa27.3■■□□□ 1.96
ABCF3-216ENST00000485921 SLAIN1Q8ND83 568 aa27.3■■□□□ 1.96
ABCF3-216ENST00000485921 RGS22Q8NE09 1264 aa27.3■■□□□ 1.96
ABCF3-216ENST00000485921 PXYLP1Q8TE99 480 aa27.3■■□□□ 1.96
ABCF3-216ENST00000485921 GTF3C6Q969F1 213 aa27.3■■□□□ 1.96
ABCF3-216ENST00000485921 ZSCAN31Q96LW9 406 aaPredicted RBP27.3■■□□□ 1.96
ABCF3-216ENST00000485921 RBM27Q9P2N5 1060 aaKnown RBP27.3■■□□□ 1.96
ABCF3-216ENST00000485921 POTEB2H3BUK9 544 aa27.29■■□□□ 1.96
ABCF3-216ENST00000485921 SSRP1Q08945 709 aaKnown RBP27.29■■□□□ 1.96
ABCF3-216ENST00000485921 CCL14Q16627 93 aa27.29■■□□□ 1.96
ABCF3-216ENST00000485921 TRMT44Q8IYL2 757 aaKnown RBP27.29■■□□□ 1.96
ABCF3-216ENST00000485921 TBC1D5Q92609 795 aa27.29■■□□□ 1.96
ABCF3-216ENST00000485921 RNF26Q9BY78 433 aaPredicted RBP27.29■■□□□ 1.96
ABCF3-216ENST00000485921 DIS3Q9Y2L1 958 aaKnown RBP27.29■■□□□ 1.96
ABCF3-216ENST00000485921 OPLAHO14841 1288 aa27.28■■□□□ 1.96
ABCF3-216ENST00000485921 CDKL5O76039 1030 aa27.28■■□□□ 1.96
ABCF3-216ENST00000485921 RPS6P62753 249 aaKnown RBP27.28■■□□□ 1.96
ABCF3-216ENST00000485921 PFKFB3Q16875 520 aaPredicted RBP27.28■■□□□ 1.96
ABCF3-216ENST00000485921 SLC9C1Q4G0N8 1177 aa27.28■■□□□ 1.96
ABCF3-216ENST00000485921 TRIM22Q8IYM9 498 aa27.28■■□□□ 1.96
ABCF3-216ENST00000485921 FAM133AQ8N9E0 248 aa27.28■■□□□ 1.96
ABCF3-216ENST00000485921 SH3TC2Q8TF17 1288 aa27.28■■□□□ 1.96
ABCF3-216ENST00000485921 TRIB2Q92519 343 aa27.28■■□□□ 1.96
ABCF3-216ENST00000485921 GPKOWQ92917 476 aaPredicted RBP eCLIP27.28■■□□□ 1.96
ABCF3-216ENST00000485921 MAF1Q9H063 256 aa27.28■■□□□ 1.96
ABCF3-216ENST00000485921 CD2BP2O95400 341 aaKnown RBP27.27■■□□□ 1.96
ABCF3-216ENST00000485921 CALML3P27482 149 aa27.27■■□□□ 1.96
ABCF3-216ENST00000485921 CNTN2Q02246 1040 aa27.27■■□□□ 1.96
ABCF3-216ENST00000485921 WWC2Q6AWC2 1192 aa27.27■■□□□ 1.96
ABCF3-216ENST00000485921 SLC30A10Q6XR72 485 aa27.27■■□□□ 1.96
ABCF3-216ENST00000485921 MAML3Q96JK9 1138 aa27.27■■□□□ 1.96
ABCF3-216ENST00000485921 SH2B1Q9NRF2 756 aaPredicted RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms