RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 TRIM32Q13049 653 aa20.68■□□□□ 0.9
SREBF1-213ENST00000485080 MAMDC4Q6UXC1 1216 aa20.68■□□□□ 0.9
SREBF1-213ENST00000485080 FAM133AQ8N9E0 248 aa20.68■□□□□ 0.9
SREBF1-213ENST00000485080 CLEC4DQ8WXI8 215 aa20.68■□□□□ 0.9
SREBF1-213ENST00000485080 HMX1Q9NP08 348 aaPredicted RBP20.68■□□□□ 0.9
SREBF1-213ENST00000485080 HOMER2Q9NSB8 354 aa20.68■□□□□ 0.9
SREBF1-213ENST00000485080 PLXNA1Q9UIW2 1896 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 ZBTB5O15062 677 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 CYTH3O43739 400 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 CAPN15O75808 1086 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 GJA8P48165 433 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 SOX10P56693 466 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 TRAF1Q13077 416 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 QRICH1Q2TAL8 776 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 MUM1L1Q5H9M0 696 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 APOA5Q6Q788 366 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 SYNE3Q6ZMZ3 975 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 FANCBQ8NB91 859 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 NUP133Q8WUM0 1156 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 TINF2Q9BSI4 451 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.67■□□□□ 0.9
SREBF1-213ENST00000485080 CYP39A1Q9NYL5 469 aa20.67■□□□□ 0.9
SREBF1-213ENST00000485080 POTEFA5A3E0 1075 aa20.66■□□□□ 0.9
SREBF1-213ENST00000485080 CASTP20810 708 aaKnown RBP20.66■□□□□ 0.9
SREBF1-213ENST00000485080 EVCP57679 992 aa20.66■□□□□ 0.9
SREBF1-213ENST00000485080 PPP2R5BQ15173 497 aa20.66■□□□□ 0.9
SREBF1-213ENST00000485080 C8orf34Q49A92 452 aa20.66■□□□□ 0.9
SREBF1-213ENST00000485080 RUFY3Q7L099 469 aa20.66■□□□□ 0.9
SREBF1-213ENST00000485080 FBXO11Q86XK2 927 aa20.66■□□□□ 0.9
SREBF1-213ENST00000485080 FGD4Q96M96 766 aa20.66■□□□□ 0.9
SREBF1-213ENST00000485080 TCEANC2Q96MN5 208 aa20.66■□□□□ 0.9
SREBF1-213ENST00000485080 MYL10Q9BUA6 226 aa20.66■□□□□ 0.9
SREBF1-213ENST00000485080 CRISPLD2Q9H0B8 497 aa20.66■□□□□ 0.9
SREBF1-213ENST00000485080 VAT1LQ9HCJ6 419 aa20.66■□□□□ 0.9
SREBF1-213ENST00000485080 ABCB11O95342 1321 aa20.66■□□□□ 0.9
SREBF1-213ENST00000485080 SYNGAP1Q96PV0 1343 aa20.66■□□□□ 0.9
SREBF1-213ENST00000485080 LOC102724159A0A0B4J2E5 919 aa20.65■□□□□ 0.9
SREBF1-213ENST00000485080 POTEB2H3BUK9 544 aa20.65■□□□□ 0.9
SREBF1-213ENST00000485080 DHX16O60231 1041 aaKnown RBP20.65■□□□□ 0.9
SREBF1-213ENST00000485080 SGPL1O95470 568 aa20.65■□□□□ 0.9
SREBF1-213ENST00000485080 CYP2C19P33261 490 aa20.65■□□□□ 0.9
SREBF1-213ENST00000485080 PWP2Q15269 919 aaKnown RBP20.65■□□□□ 0.9
SREBF1-213ENST00000485080 Q6ZUG5 572 aa20.65■□□□□ 0.9
SREBF1-213ENST00000485080 AMNQ9BXJ7 453 aa20.65■□□□□ 0.9
SREBF1-213ENST00000485080 BRPF3Q9ULD4 1205 aa20.65■□□□□ 0.9
SREBF1-213ENST00000485080 CYP46A1Q9Y6A2 500 aa20.65■□□□□ 0.9
SREBF1-213ENST00000485080 MYH6P13533 1939 aa20.65■□□□□ 0.9
SREBF1-213ENST00000485080 PNMA6FA0A0J9YX94 578 aa20.64■□□□□ 0.89
SREBF1-213ENST00000485080 NFIBO00712 420 aa20.64■□□□□ 0.89
SREBF1-213ENST00000485080 ZBTB43O43298 467 aa20.64■□□□□ 0.89
SREBF1-213ENST00000485080 CYBAP13498 195 aa20.64■□□□□ 0.89
SREBF1-213ENST00000485080 CPA1P15085 419 aa20.64■□□□□ 0.89
SREBF1-213ENST00000485080 GHRHRQ02643 423 aa20.64■□□□□ 0.89
SREBF1-213ENST00000485080 U2AF1L4Q8WU68 220 aaKnown RBP20.64■□□□□ 0.89
SREBF1-213ENST00000485080 RBM28Q9NW13 759 aaKnown RBP20.64■□□□□ 0.89
SREBF1-213ENST00000485080 MRPL11Q9Y3B7 192 aaKnown RBP20.64■□□□□ 0.89
SREBF1-213ENST00000485080 NID2Q14112 1375 aa20.63■□□□□ 0.89
SREBF1-213ENST00000485080 SEC24BO95487 1268 aa20.63■□□□□ 0.89
SREBF1-213ENST00000485080 MYCP01106 439 aaPredicted RBP20.63■□□□□ 0.89
SREBF1-213ENST00000485080 TAL1P17542 331 aaPredicted RBP20.63■□□□□ 0.89
SREBF1-213ENST00000485080 FGD1P98174 961 aa20.63■□□□□ 0.89
SREBF1-213ENST00000485080 TMTC3Q6ZXV5 915 aa20.63■□□□□ 0.89
SREBF1-213ENST00000485080 MICU3Q86XE3 530 aa20.63■□□□□ 0.89
SREBF1-213ENST00000485080 SRBD1Q8N5C6 995 aaKnown RBP20.63■□□□□ 0.89
SREBF1-213ENST00000485080 SAMD3Q8N6K7 520 aa20.63■□□□□ 0.89
SREBF1-213ENST00000485080 PIGSQ96S52 555 aa20.63■□□□□ 0.89
SREBF1-213ENST00000485080 KLF18A0A0U1RQI7 1052 aa20.62■□□□□ 0.89
SREBF1-213ENST00000485080 MSCO60682 206 aa20.62■□□□□ 0.89
SREBF1-213ENST00000485080 PPP1R11O60927 126 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-213ENST00000485080 EN2P19622 333 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-213ENST00000485080 CCND3P30281 292 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-213ENST00000485080 CNTN2Q02246 1040 aa20.62■□□□□ 0.89
SREBF1-213ENST00000485080 BAATQ14032 418 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-213ENST00000485080 USH1GQ495M9 461 aa20.62■□□□□ 0.89
SREBF1-213ENST00000485080 NSMFQ6X4W1 530 aa20.62■□□□□ 0.89
SREBF1-213ENST00000485080 RNF207Q6ZRF8 634 aa20.62■□□□□ 0.89
SREBF1-213ENST00000485080 MCF2L2Q86YR7 1114 aa20.62■□□□□ 0.89
SREBF1-213ENST00000485080 TRPV1Q8NER1 839 aa20.62■□□□□ 0.89
SREBF1-213ENST00000485080 MORC4Q8TE76 937 aa20.62■□□□□ 0.89
SREBF1-213ENST00000485080 SHISA4Q96DD7 197 aa20.62■□□□□ 0.89
SREBF1-213ENST00000485080 DEFB118Q96PH6 123 aa20.62■□□□□ 0.89
SREBF1-213ENST00000485080 ALDH8A1Q9H2A2 487 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-213ENST00000485080 MAP3K20Q9NYL2 800 aaKnown RBP20.62■□□□□ 0.89
SREBF1-213ENST00000485080 SOWAHBA6NEL2 793 aa20.61■□□□□ 0.89
SREBF1-213ENST00000485080 PLEKHA8P1O95397 391 aa20.61■□□□□ 0.89
SREBF1-213ENST00000485080 RXRAP19793 462 aa20.61■□□□□ 0.89
SREBF1-213ENST00000485080 RPS6P62753 249 aaKnown RBP20.61■□□□□ 0.89
SREBF1-213ENST00000485080 RTN1Q16799 776 aa20.61■□□□□ 0.89
SREBF1-213ENST00000485080 LHX8Q68G74 356 aa20.61■□□□□ 0.89
SREBF1-213ENST00000485080 BRF1Q92994 677 aa20.61■□□□□ 0.89
SREBF1-213ENST00000485080 RRP36Q96EU6 259 aaKnown RBP20.61■□□□□ 0.89
SREBF1-213ENST00000485080 ADD3Q9UEY8 706 aaKnown RBP20.61■□□□□ 0.89
SREBF1-213ENST00000485080 OGDHLQ9ULD0 1010 aa20.61■□□□□ 0.89
SREBF1-213ENST00000485080 PCDHA1Q9Y5I3 950 aa20.61■□□□□ 0.89
SREBF1-213ENST00000485080 PDE4DIPQ5VU43 2346 aa20.6■□□□□ 0.89
SREBF1-213ENST00000485080 CCDC196A0A1B0GTZ2 297 aa20.6■□□□□ 0.89
SREBF1-213ENST00000485080 ASB14A6NK59 587 aa20.6■□□□□ 0.89
SREBF1-213ENST00000485080 SEPT4O43236 478 aa20.6■□□□□ 0.89
SREBF1-213ENST00000485080 SNAI1O95863 264 aaPredicted RBP20.6■□□□□ 0.89
SREBF1-213ENST00000485080 FUT2Q10981 343 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms