RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 DCXO43602 365 aa21.65■■□□□ 1.06
DDR1-245ENST00000484556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.65■■□□□ 1.06
DDR1-245ENST00000484556 PPP1R13LQ8WUF5 828 aa21.65■■□□□ 1.06
DDR1-245ENST00000484556 FTOQ9C0B1 505 aaKnown RBP eCLIP21.65■■□□□ 1.06
DDR1-245ENST00000484556 PDGFCQ9NRA1 345 aa21.65■■□□□ 1.06
DDR1-245ENST00000484556 CTDP1Q9Y5B0 961 aaPredicted RBP21.65■■□□□ 1.06
DDR1-245ENST00000484556 ATP2A1O14983 1001 aa21.64■■□□□ 1.05
DDR1-245ENST00000484556 ZBED4O75132 1171 aa21.64■■□□□ 1.05
DDR1-245ENST00000484556 SSH3Q8TE77 659 aa21.64■■□□□ 1.05
DDR1-245ENST00000484556 KIFC2Q96AC6 838 aa21.64■■□□□ 1.05
DDR1-245ENST00000484556 SIP14410 1827 aa21.64■■□□□ 1.05
DDR1-245ENST00000484556 HFE2Q6ZVN8 426 aa21.63■■□□□ 1.05
DDR1-245ENST00000484556 C16orf86Q6ZW13 317 aa21.63■■□□□ 1.05
DDR1-245ENST00000484556 EEPD1Q7L9B9 569 aa21.63■■□□□ 1.05
DDR1-245ENST00000484556 PRPF38AQ8NAV1 312 aaKnown RBP21.63■■□□□ 1.05
DDR1-245ENST00000484556 LMCD1Q9NZU5 365 aa21.63■■□□□ 1.05
DDR1-245ENST00000484556 FBXO40Q9UH90 709 aa21.63■■□□□ 1.05
DDR1-245ENST00000484556 TCRBV5S4A2TA0A5A2 114 aa21.62■■□□□ 1.05
DDR1-245ENST00000484556 SOWAHBA6NEL2 793 aa21.62■■□□□ 1.05
DDR1-245ENST00000484556 NDUFB10O96000 172 aa21.62■■□□□ 1.05
DDR1-245ENST00000484556 SUPT20HL2P0C7V6 817 aa21.62■■□□□ 1.05
DDR1-245ENST00000484556 RFC2P35250 354 aa21.62■■□□□ 1.05
DDR1-245ENST00000484556 SLFNL1Q499Z3 407 aa21.62■■□□□ 1.05
DDR1-245ENST00000484556 C12orf60Q5U649 245 aa21.62■■□□□ 1.05
DDR1-245ENST00000484556 FBXO16Q8IX29 292 aaPredicted RBP21.62■■□□□ 1.05
DDR1-245ENST00000484556 FAM133AQ8N9E0 248 aa21.62■■□□□ 1.05
DDR1-245ENST00000484556 CHST13Q8NET6 341 aa21.62■■□□□ 1.05
DDR1-245ENST00000484556 ARHGAP45Q92619 1136 aa21.62■■□□□ 1.05
DDR1-245ENST00000484556 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.62■■□□□ 1.05
DDR1-245ENST00000484556 SUGCTQ9HAC7 445 aa21.62■■□□□ 1.05
DDR1-245ENST00000484556 MYH4Q9Y623 1939 aa21.61■■□□□ 1.05
DDR1-245ENST00000484556 GRXCR2A6NFK2 248 aa21.61■■□□□ 1.05
DDR1-245ENST00000484556 F5H6K3 240 aa21.61■■□□□ 1.05
DDR1-245ENST00000484556 MBD4O95243 580 aa21.61■■□□□ 1.05
DDR1-245ENST00000484556 IQCF3P0C7M6 154 aa21.61■■□□□ 1.05
DDR1-245ENST00000484556 TRIM27P14373 513 aa21.61■■□□□ 1.05
DDR1-245ENST00000484556 RARSP54136 660 aaKnown RBP21.61■■□□□ 1.05
DDR1-245ENST00000484556 KLRC3Q07444 240 aa21.61■■□□□ 1.05
DDR1-245ENST00000484556 C1orf115Q9H7X2 142 aa21.61■■□□□ 1.05
DDR1-245ENST00000484556 SLC38A10Q9HBR0 1119 aa21.61■■□□□ 1.05
DDR1-245ENST00000484556 POTEB3A0JP26 581 aa21.6■■□□□ 1.05
DDR1-245ENST00000484556 USP17L12C9JPN9 530 aa21.6■■□□□ 1.05
DDR1-245ENST00000484556 USP17L21D6R901 530 aa21.6■■□□□ 1.05
DDR1-245ENST00000484556 CT47B1P0C2W7 299 aaPredicted RBP21.6■■□□□ 1.05
DDR1-245ENST00000484556 KCNJ6P48051 423 aa21.6■■□□□ 1.05
DDR1-245ENST00000484556 FAM47CQ5HY64 1035 aa21.6■■□□□ 1.05
DDR1-245ENST00000484556 POTEBQ6S5H4 581 aa21.6■■□□□ 1.05
DDR1-245ENST00000484556 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.6■■□□□ 1.05
DDR1-245ENST00000484556 CLUAP1Q96AJ1 413 aa21.6■■□□□ 1.05
DDR1-245ENST00000484556 H3BQ06 376 aaPredicted RBP21.59■■□□□ 1.05
DDR1-245ENST00000484556 RBAK-RBAKDNI3L0D1 243 aa21.59■■□□□ 1.05
DDR1-245ENST00000484556 TTF1Q15361 905 aaPredicted RBP21.59■■□□□ 1.05
DDR1-245ENST00000484556 TAPT1Q6NXT6 567 aa21.59■■□□□ 1.05
DDR1-245ENST00000484556 AACSQ86V21 672 aa21.59■■□□□ 1.05
DDR1-245ENST00000484556 TRMT2AQ8IZ69 625 aaKnown RBP21.59■■□□□ 1.05
DDR1-245ENST00000484556 ZBED2Q9BTP6 218 aa21.59■■□□□ 1.05
DDR1-245ENST00000484556 A1CFQ9NQ94 594 aaKnown RBP21.59■■□□□ 1.05
DDR1-245ENST00000484556 LCTP09848 1927 aa21.59■■□□□ 1.05
DDR1-245ENST00000484556 ASB14A6NK59 587 aa21.58■■□□□ 1.05
DDR1-245ENST00000484556 BAIAP3O94812 1187 aa21.58■■□□□ 1.05
DDR1-245ENST00000484556 MYL3P08590 195 aa21.58■■□□□ 1.05
DDR1-245ENST00000484556 WDR5P61964 334 aaKnown RBP21.58■■□□□ 1.05
DDR1-245ENST00000484556 DEFB103AP81534 67 aa21.58■■□□□ 1.05
DDR1-245ENST00000484556 ATP8B2P98198 1209 aa21.58■■□□□ 1.05
DDR1-245ENST00000484556 AMOTL1Q8IY63 956 aa21.58■■□□□ 1.05
DDR1-245ENST00000484556 RETREG2Q8NC44 543 aa21.58■■□□□ 1.05
DDR1-245ENST00000484556 ACAD9Q9H845 621 aa21.58■■□□□ 1.05
DDR1-245ENST00000484556 TRIP12Q14669 1992 aaPredicted RBP21.57■■□□□ 1.04
DDR1-245ENST00000484556 CFAP54Q96N23 3096 aa21.57■■□□□ 1.04
DDR1-245ENST00000484556 GOLIM4O00461 696 aa21.57■■□□□ 1.04
DDR1-245ENST00000484556 PURAQ00577 322 aaKnown RBP21.57■■□□□ 1.04
DDR1-245ENST00000484556 PRSS33Q8NF86 280 aa21.57■■□□□ 1.04
DDR1-245ENST00000484556 DNAJC2Q99543 621 aaKnown RBP21.57■■□□□ 1.04
DDR1-245ENST00000484556 ATP8A2Q9NTI2 1148 aa21.57■■□□□ 1.04
DDR1-245ENST00000484556 COG6Q9Y2V7 657 aa21.57■■□□□ 1.04
DDR1-245ENST00000484556 NOP58Q9Y2X3 529 aaKnown RBP21.57■■□□□ 1.04
DDR1-245ENST00000484556 SCN10AQ9Y5Y9 1956 aa21.57■■□□□ 1.04
DDR1-245ENST00000484556 TRIOO75962 3097 aa21.57■■□□□ 1.04
DDR1-245ENST00000484556 PITPNM1O00562 1244 aa21.56■■□□□ 1.04
DDR1-245ENST00000484556 IQSEC1Q6DN90 963 aa21.56■■□□□ 1.04
DDR1-245ENST00000484556 KIAA1211Q6ZU35 1233 aa21.56■■□□□ 1.04
DDR1-245ENST00000484556 STK11IPQ8N1F8 1099 aa21.56■■□□□ 1.04
DDR1-245ENST00000484556 TGS1Q96RS0 853 aaKnown RBP21.56■■□□□ 1.04
DDR1-245ENST00000484556 RNF146Q9NTX7 359 aa21.56■■□□□ 1.04
DDR1-245ENST00000484556 Q9Y3F1 56 aa21.56■■□□□ 1.04
DDR1-245ENST00000484556 LINC01553A4QN01 128 aa21.55■■□□□ 1.04
DDR1-245ENST00000484556 ST18O60284 1047 aa21.55■■□□□ 1.04
DDR1-245ENST00000484556 OAZ1P54368 228 aa21.55■■□□□ 1.04
DDR1-245ENST00000484556 ERVK-21P61565 698 aa21.55■■□□□ 1.04
DDR1-245ENST00000484556 ZP2Q05996 745 aa21.55■■□□□ 1.04
DDR1-245ENST00000484556 NBPF20Q3BBV1 942 aa21.55■■□□□ 1.04
DDR1-245ENST00000484556 NEK9Q8TD19 979 aa21.55■■□□□ 1.04
DDR1-245ENST00000484556 FRAT1Q92837 279 aaPredicted RBP21.55■■□□□ 1.04
DDR1-245ENST00000484556 POLR3EQ9NVU0 708 aa21.55■■□□□ 1.04
DDR1-245ENST00000484556 CHGBP05060 677 aa21.54■■□□□ 1.04
DDR1-245ENST00000484556 MFSD14AQ96MC6 490 aa21.54■■□□□ 1.04
DDR1-245ENST00000484556 PURBQ96QR8 312 aaKnown RBP21.54■■□□□ 1.04
DDR1-245ENST00000484556 MTG1Q9BT17 334 aaPredicted RBP21.54■■□□□ 1.04
DDR1-245ENST00000484556 NYAP2Q9P242 653 aa21.54■■□□□ 1.04
DDR1-245ENST00000484556 PUS10Q3MIT2 529 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms