RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 PLCH1Q4KWH8 1693 aa22.03■■□□□ 1.12
RPUSD3-216ENST00000484134 LRP5O75197 1615 aa22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 LOC102724159A0A0B4J2E5 919 aa22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 MAGEB6P1A0A0J9YX57 407 aa22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 DYNLL1P63167 89 aaKnown RBP22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 PWP2Q15269 919 aaKnown RBP22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 SWT1Q5T5J6 900 aaKnown RBP22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 GBP6Q6ZN66 633 aa22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 NUP58Q9BVL2 599 aa22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 POLD4Q9HCU8 107 aa22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 HAUS3Q68CZ6 603 aa22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 ANKRD40Q6AI12 368 aa22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 CCDC70Q6NSX1 233 aa22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 GPIHBP1Q8IV16 184 aa22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 RETREG2Q8NC44 543 aa22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 PCMTD1Q96MG8 357 aaPredicted RBP22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 RIOK1Q9BRS2 568 aaKnown RBP22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 TMEM60Q9H2L4 133 aa22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 ABCF2Q9UG63 623 aa22.02■■□□□ 1.12
RPUSD3-216ENST00000484134 DUOX1Q9NRD9 1551 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 ATF3P18847 181 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 PDCLQ13371 301 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 IQCA1Q86XH1 822 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 SH2D3CQ8N5H7 860 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 TRIM58Q8NG06 486 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 CNOT6LQ96LI5 555 aaKnown RBP22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 CCDC42Q96M95 316 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 OSBPL9Q96SU4 736 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 SH2D4AQ9H788 454 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 ARHGAP20Q9P2F6 1191 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 TOGARAM1Q9Y4F4 1720 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 SHTN1A0MZ66 631 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 CALM1P0DP23 149 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 CALM2P0DP24 149 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 CALM3P0DP25 149 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 EPB41P11171 864 aaKnown RBP22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 ITIH3Q06033 890 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 PFKFB3Q16875 520 aaPredicted RBP22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 SLC4A9Q96Q91 983 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 KBTBD4Q9NVX7 518 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 PCDHA13Q9Y5I0 950 aa22.01■■□□□ 1.11
RPUSD3-216ENST00000484134 EPHB6O15197 1021 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 NCK2O43639 380 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 DDAH1O94760 285 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 SKOR1P84550 965 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 CDK17Q00537 523 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 TYW1BQ6NUM6 668 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 ZBTB1Q9Y2K1 713 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 SHANK3Q9BYB0 1731 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 OPA1O60313 960 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 INPP5BP32019 993 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 CEP89Q96ST8 783 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 IFIH1Q9BYX4 1025 aaKnown RBP22■■□□□ 1.11
RPUSD3-216ENST00000484134 PRDM11Q9NQV5 511 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 SALL4Q9UJQ4 1053 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 SLIT2O94813 1529 aa22■■□□□ 1.11
RPUSD3-216ENST00000484134 ZNF142P52746 1687 aaPredicted RBP21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 TACC1O75410 805 aa21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 EPHB4P54760 987 aa21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 SPA17Q15506 151 aa21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 KCTD16Q68DU8 428 aa21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 RASSF8Q8NHQ8 419 aa21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 TSGA10Q9BZW7 698 aa21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 STIM2Q9P246 746 aa21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 WTIPA6NIX2 430 aaPredicted RBP21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 FGRP09769 529 aa21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 PRLRP16471 622 aa21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 MTIF2P46199 727 aaKnown RBP21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 STK4Q13043 487 aa21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 P2RX5Q93086 422 aa21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 DHTKD1Q96HY7 919 aaPredicted RBP21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 ZIM3Q96PE6 472 aa21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 NOC4LQ9BVI4 516 aaKnown RBP21.99■■□□□ 1.11
RPUSD3-216ENST00000484134 ATP1A2P50993 1020 aa21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 FAM47AQ5JRC9 791 aa21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 ALS2CLQ60I27 953 aa21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 DTHD1Q6ZMT9 781 aa21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 NOC3LQ8WTT2 800 aaKnown RBP21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 GPKOWQ92917 476 aaPredicted RBP eCLIP21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 ERGIC2Q96RQ1 377 aa21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 KRT14P02533 472 aa21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 EMBQ6PCB8 327 aa21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 C2CD5Q86YS7 1000 aa21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 ZSCAN29Q8IWY8 852 aaPredicted RBP21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 BLIDQ8IZY5 108 aa21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 RBM12Q9NTZ6 932 aaKnown RBP21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 PLAGL2Q9UPG8 496 aa21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 NUP98P52948 1817 aa21.98■■□□□ 1.11
RPUSD3-216ENST00000484134 A0A1W2PQJ5 194 aa21.97■■□□□ 1.11
RPUSD3-216ENST00000484134 CYP19A1P11511 503 aaPredicted RBP21.97■■□□□ 1.11
RPUSD3-216ENST00000484134 CCNE1P24864 410 aa21.97■■□□□ 1.11
RPUSD3-216ENST00000484134 EIF4A3P38919 411 aaKnown RBP21.97■■□□□ 1.11
RPUSD3-216ENST00000484134 ANKRD13CQ8N6S4 541 aa21.97■■□□□ 1.11
RPUSD3-216ENST00000484134 RUBCNQ92622 972 aa21.97■■□□□ 1.11
RPUSD3-216ENST00000484134 CAVIN3Q969G5 261 aa21.97■■□□□ 1.11
RPUSD3-216ENST00000484134 MYCBPQ99417 103 aaPredicted RBP21.97■■□□□ 1.11
RPUSD3-216ENST00000484134 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.97■■□□□ 1.11
RPUSD3-216ENST00000484134 FCER1AP12319 257 aa21.97■■□□□ 1.11
RPUSD3-216ENST00000484134 FIGNQ5HY92 759 aa21.97■■□□□ 1.11
RPUSD3-216ENST00000484134 ZNF34Q8IZ26 560 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms