RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 TTC1Q99614 292 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 AP1G2O75843 785 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 TBC1D22AQ8WUA7 517 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 RAPGEF5Q92565 580 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 PRAM1Q96QH2 718 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 ARAP1Q96P48 1450 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 SKAP2O75563 359 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-207ENST00000483888 INHBAP08476 426 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 CASP2P42575 452 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 KLHL23Q8NBE8 558 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 ALDH1L1O75891 902 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 DNM2P50570 870 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 PPP2R2AP63151 447 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 TRPV6Q9H1D0 765 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 PSD3Q9NYI0 1048 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 ESYT2A0FGR8 921 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 CUL1Q13616 776 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 GSPT2Q8IYD1 628 aaKnown RBP11.15□□□□□ -0.62
COL12A1-207ENST00000483888 PARVBQ9HBI1 364 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 NCOA5Q9HCD5 579 aaKnown RBP11.15□□□□□ -0.62
COL12A1-207ENST00000483888 PIK3R4Q99570 1358 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 PARP1P09874 1014 aaKnown RBP11.15□□□□□ -0.62
COL12A1-207ENST00000483888 PLTPP55058 493 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 MAGOHP61326 146 aaKnown RBP11.15□□□□□ -0.62
COL12A1-207ENST00000483888 TMC5Q6UXY8 1006 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 MAGOHBQ96A72 148 aaKnown RBP11.15□□□□□ -0.62
COL12A1-207ENST00000483888 SLC40A1Q9NP59 571 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 NVLO15381 856 aaKnown RBP11.15□□□□□ -0.62
COL12A1-207ENST00000483888 NBNO60934 754 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 IFNB1P01574 187 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 SERPINB1P30740 379 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 HP1BP3Q5SSJ5 553 aaPredicted RBP11.15□□□□□ -0.62
COL12A1-207ENST00000483888 PHACTR3Q96KR7 559 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 TSPAN9O75954 239 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 CALM1P0DP23 149 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 CALM2P0DP24 149 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 CALM3P0DP25 149 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 ST13P50502 369 aaKnown RBP11.15□□□□□ -0.62
COL12A1-207ENST00000483888 U2AF1L4Q8WU68 220 aaKnown RBP11.15□□□□□ -0.62
COL12A1-207ENST00000483888 PFKFB1P16118 471 aa11.15□□□□□ -0.62
COL12A1-207ENST00000483888 EIF3HO15372 352 aaKnown RBP eCLIP11.15□□□□□ -0.63
COL12A1-207ENST00000483888 PPME1Q9Y570 386 aa11.15□□□□□ -0.63
COL12A1-207ENST00000483888 SBNO2Q9Y2G9 1366 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 POTEB3A0JP26 581 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 CFLARO15519 480 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 MAP4P27816 1152 aaKnown RBP11.14□□□□□ -0.63
COL12A1-207ENST00000483888 NDUFA8P51970 172 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 SLC12A2P55011 1212 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 GUCY1A3Q02108 690 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 POTEBQ6S5H4 581 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 RFX8Q6ZV50 586 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 TOM1L2Q6ZVM7 507 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 BZW1Q7L1Q6 419 aaKnown RBP11.14□□□□□ -0.63
COL12A1-207ENST00000483888 BLZF1Q9H2G9 400 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 SPDYE3A6NKU9 549 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 PFKFB2O60825 505 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 BCRP11274 1271 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 C11orf57Q6ZUT1 292 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-207ENST00000483888 UPF3AQ9H1J1 476 aaKnown RBP11.14□□□□□ -0.63
COL12A1-207ENST00000483888 SMAPO00193 183 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 GSTA1P08263 222 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 GSTA2P09210 222 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 TBL3Q12788 808 aaKnown RBP11.14□□□□□ -0.63
COL12A1-207ENST00000483888 SEPT3Q9UH03 358 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 CASKIN1Q8WXD9 1431 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 A0A0G2JND7 137 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 ZNF473Q8WTR7 871 aaKnown RBP11.14□□□□□ -0.63
COL12A1-207ENST00000483888 HAUS7Q99871 368 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 MCM8Q9UJA3 840 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 JAK2O60674 1132 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 SIX5Q8N196 739 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 BBOF1Q8ND07 529 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 NSMCE1Q8WV22 266 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 KLHL25Q9H0H3 589 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 STX18Q9P2W9 335 aaKnown RBP11.14□□□□□ -0.63
COL12A1-207ENST00000483888 RARS2Q5T160 578 aaKnown RBP11.14□□□□□ -0.63
COL12A1-207ENST00000483888 MRPL50Q8N5N7 158 aaKnown RBP11.14□□□□□ -0.63
COL12A1-207ENST00000483888 FAM161BQ96MY7 647 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 GSDMAQ96QA5 445 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 OLFML3Q9NRN5 406 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 TRIM16O95361 564 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 AP1B1Q10567 949 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 ZCRB1Q8TBF4 217 aaKnown RBP11.14□□□□□ -0.63
COL12A1-207ENST00000483888 NT5C3AQ9H0P0 336 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 DDX42Q86XP3 938 aaKnown RBP eCLIP11.14□□□□□ -0.63
COL12A1-207ENST00000483888 NEK9Q8TD19 979 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 DNAJC9Q8WXX5 260 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 TRIM15Q9C019 465 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 RGL1Q9NZL6 768 aa11.14□□□□□ -0.63
COL12A1-207ENST00000483888 BZW2Q9Y6E2 419 aaKnown RBP11.14□□□□□ -0.63
COL12A1-207ENST00000483888 RHOBTB1O94844 696 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 WDR44Q5JSH3 913 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 SNX5Q9Y5X3 404 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 PTPN21Q16825 1174 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 ITGB1BP2Q9UKP3 347 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 STX8Q9UNK0 236 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 EIF2B2P49770 351 aaKnown RBP11.13□□□□□ -0.63
COL12A1-207ENST00000483888 ATP8B2P98198 1209 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 TRIM16LQ309B1 348 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 FAM186BQ8IYM0 893 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms