RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 TROAPQ12815 778 aa11.22□□□□□ -0.61
HMG20B-210ENST00000483417 ANO1Q5XXA6 986 aa11.22□□□□□ -0.61
HMG20B-210ENST00000483417 ZNF467Q7Z7K2 595 aaPredicted RBP11.22□□□□□ -0.61
HMG20B-210ENST00000483417 FAM160B2Q86V87 743 aa11.22□□□□□ -0.61
HMG20B-210ENST00000483417 MSL3Q8N5Y2 521 aaKnown RBP11.22□□□□□ -0.61
HMG20B-210ENST00000483417 ARRDC4Q8NCT1 418 aa11.22□□□□□ -0.61
HMG20B-210ENST00000483417 PNMA1Q8ND90 353 aa11.22□□□□□ -0.61
HMG20B-210ENST00000483417 CHURC1Q8WUH1 139 aa11.22□□□□□ -0.61
HMG20B-210ENST00000483417 TBC1D32Q96NH3 1257 aa11.22□□□□□ -0.61
HMG20B-210ENST00000483417 SENP6Q9GZR1 1112 aaPredicted RBP11.22□□□□□ -0.61
HMG20B-210ENST00000483417 PDRG1Q9NUG6 133 aa11.22□□□□□ -0.61
HMG20B-210ENST00000483417 CYP46A1Q9Y6A2 500 aa11.22□□□□□ -0.61
HMG20B-210ENST00000483417 A0A1W2PPC1 479 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 SNHG28P0DPA3 235 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 PSMA5P28066 241 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 LIFRP42702 1097 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 NEK4P51957 841 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 STAT2P52630 851 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 CCDC178Q5BJE1 867 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 GJC2Q5T442 439 aaPredicted RBP11.21□□□□□ -0.61
HMG20B-210ENST00000483417 BTNL9Q6UXG8 535 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 CCDC144CPQ8IYA2 1237 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 CMTR1Q8N1G2 835 aaKnown RBP11.21□□□□□ -0.61
HMG20B-210ENST00000483417 CHST13Q8NET6 341 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 BRF1Q92994 677 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 DDX11Q96FC9 970 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 TMEM87BQ96K49 555 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 AGBL1Q96MI9 1066 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 AGXT2Q9BYV1 514 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 KAT14Q9H8E8 782 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 FAM217BQ9NTX9 383 aaPredicted RBP11.21□□□□□ -0.61
HMG20B-210ENST00000483417 PCDH10Q9P2E7 1040 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 PRR12Q9ULL5 1215 aa11.21□□□□□ -0.61
HMG20B-210ENST00000483417 ZMYND8Q9ULU4 1186 aaPredicted RBP11.21□□□□□ -0.61
HMG20B-210ENST00000483417 BAZ2BQ9UIF8 2168 aaKnown RBP11.21□□□□□ -0.62
HMG20B-210ENST00000483417 SYNGAP1Q96PV0 1343 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 HMGB1P09429 215 aaKnown RBP11.2□□□□□ -0.62
HMG20B-210ENST00000483417 SYN1P17600 705 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 AK2P54819 239 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 SNX17Q15036 470 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 LRRC41Q15345 812 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 SLC39A5Q6ZMH5 540 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 NFXL1Q6ZNB6 911 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 SGMS1Q86VZ5 419 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 FAM133AQ8N9E0 248 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 NUP133Q8WUM0 1156 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 DCAF4Q8WV16 495 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 KATNBL1Q9H079 304 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 VAT1LQ9HCJ6 419 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 FBXO40Q9UH90 709 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 MAD2L2Q9UI95 211 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 TPCN1Q9ULQ1 816 aa11.2□□□□□ -0.62
HMG20B-210ENST00000483417 PLXNA1Q9UIW2 1896 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 WDR19Q8NEZ3 1342 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 ERICH2A1L162 156 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 PALM3A6NDB9 673 aaPredicted RBP11.19□□□□□ -0.62
HMG20B-210ENST00000483417 SOWAHBA6NEL2 793 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 PPFIA3O75145 1194 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 ADAMTS4O75173 837 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 CD2BP2O95400 341 aaKnown RBP11.19□□□□□ -0.62
HMG20B-210ENST00000483417 PDIA3P30101 505 aaKnown RBP11.19□□□□□ -0.62
HMG20B-210ENST00000483417 CDC27P30260 824 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 ADD1P35611 737 aaKnown RBP11.19□□□□□ -0.62
HMG20B-210ENST00000483417 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 NT5C2P49902 561 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 ZNF543Q08ER8 600 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 C1orf53Q5VUE5 145 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 NOL8Q76FK4 1167 aaKnown RBP11.19□□□□□ -0.62
HMG20B-210ENST00000483417 ZNF654Q8IZM8 581 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 ANKRD35Q8N283 1001 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 TMTC2Q8N394 836 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 FBXL16Q8N461 479 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 KLHDC9Q8NEP7 349 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 MTA3Q9BTC8 594 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 ALDH8A1Q9H2A2 487 aaPredicted RBP11.19□□□□□ -0.62
HMG20B-210ENST00000483417 RANBP17Q9H2T7 1088 aaKnown RBP11.19□□□□□ -0.62
HMG20B-210ENST00000483417 SMCHD1A6NHR9 2005 aa11.19□□□□□ -0.62
HMG20B-210ENST00000483417 ASTN1O14525 1302 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 RANBP2P49792 3224 aaKnown RBP11.18□□□□□ -0.62
HMG20B-210ENST00000483417 KLF18A0A0U1RQI7 1052 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 CCDC69A6NI79 296 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 CYTH3O43739 400 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 EIF5BO60841 1220 aaKnown RBP11.18□□□□□ -0.62
HMG20B-210ENST00000483417 LARGE1O95461 756 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 RARBP10826 455 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 AKR1A1P14550 325 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 ADCYAP1R1P41586 468 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 MAGEA10P43363 369 aaPredicted RBP11.18□□□□□ -0.62
HMG20B-210ENST00000483417 ATN1P54259 1190 aaPredicted RBP11.18□□□□□ -0.62
HMG20B-210ENST00000483417 EVCP57679 992 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 CCT2P78371 535 aaKnown RBP11.18□□□□□ -0.62
HMG20B-210ENST00000483417 CNTN2Q02246 1040 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 ACVR2BQ13705 512 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 GRM4Q14833 912 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 SART3Q15020 963 aaKnown RBP11.18□□□□□ -0.62
HMG20B-210ENST00000483417 CCDC96Q2M329 555 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 TKFCQ3LXA3 575 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 CCSAPQ6IQ19 270 aaPredicted RBP11.18□□□□□ -0.62
HMG20B-210ENST00000483417 APOA5Q6Q788 366 aa11.18□□□□□ -0.62
HMG20B-210ENST00000483417 CATIPQ7Z7H3 387 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms